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2016

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Methods for Detecting Microbial Methane Production and Consumption by Gas Chromatography, Jared T. Aldridge, Jennie L. Catlett, Megan L. Smith, and Nicole R. Buan

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Chloroplast membrane remodeling during freezing stress is accompanied by cytoplasmic acidification activating SENSITIVE TO FREEZING 2, Allison C. Barnes, Christoph Benning, and Rebecca Roston

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Fatty acid transport proteins: targeting FATP2 as a gatekeeper involved in the transport of exogenous fatty acids, Paul N. Black, Constance Ahowesso, David Montefusco, Nipun Saini, and Concetta C. DiRusso

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Oma1 Links Mitochondrial Protein Quality Control and TOR Signaling To Modulate Physiological Plasticity and Cellular Stress Responses, Iryna Bohovych, Stavroula Kastora, Sara Christianson, Danelle Topil, Heejeong Kim, Teresa Fangman, You J. Zhou, Antoni Barrientos, Jaekwon Lee, Alistair J.P. Brown, and Oleh Khalimonchuk

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Sending Out an SOS: Mitochondria as a Signaling Hub, Iryna Bohovych and Oleh Khalimonchuk

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Inhibiting hexamer disassembly of human UDP-glucose dehydrogenase by photoactivated amino acid crosslinking, George Grady, Ashley Thelen, Jaleen Albers, Tong Ju, Jiantao Guo, Joseph J. Barycki, and Melanie A. Simpson

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Regulation of DJ-1 by glutaredoxin 1 in vivo – implications for Parkinson’s disease, William M. Johnson, Marcin Golczak, Kyonghwan Choe, Pierce L. Curran, Olga Gorelenkova Miller, Chen Yao, Wenzhang Wang, Jiusheng Lin, Nicole M. Milkovic, Ajit Ray, Vijayalakshmi Ravindranath, Xiongwei Zhu, Mark A. Wilson, Amy L. Wilson-Delfosse, Shu G. Chen, and John J. Mieyal

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Synthesis and transfer of galactolipids in the chloroplast envelope membranes of Arabidopsis thaliana, Amélie Kelly, Barbara Kalisch, Georg Hölzl, Sandra Schulze, Juliane Thiele, Michael Melzer, Rebecca L. Roston, Christoph Benning, and Peter Dörmann

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Caloric restriction of db/db mice reverts hepatic steatosis and body weight with divergent hepatic metabolism, Kyung Eun Kim, Youngae Jung, Soonki Min, Miso Nam, Rok Won Heo, Byeong Tak Jeon, Dae Hyun Song, Chin-ok Yi, Eun Ae Jeong, Hwajin Kim, Jeonghyun Kim, Seon-Yong Jeong, Woori Kwak, Do Hyun Ryu, Tamas L. Horvath, Gu Seob Roh, and Geum-Sook Hwang

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Atomic resolution experimental phase information reveals extensive disorder and bound 2-methyl-2,4-pentanediol in Ca2+-calmodulin, Jiusheng Lin, Henry van den Bedem, Axel T. Brunger, and Mark A. Wilson

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Stabilin-1 and Stabilin-2 are specific receptors for the cellular internalization of phosphorothioate-modified antisense oligonucleotides (ASOs) in the liver, Colton M. Miller, Aaron J. Donner, Emma E. Blank, Andrew W. Egger, Brianna M. Kellar, Michael E. Østergaard, Punit P. Seth, and Edward N. Harris

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Stabilin-1 and Stabilin-2 are specific receptors for the cellular internalization of phosphorothioate-modified antisense oligonucleotides (ASOs) in the liver, Colton M. Miller, Aaron J. Donnerr, Emma E. Blank, Andrew W. Egger, Brianna M. Kellar, Michael E. Østergaard, Punit P. Seth, and Edward N. Harris

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Activation of ERK and NF-κB during HARE-Mediated Heparin Uptake Require Only One of the Four Endocytic Motifs, Madhu S. Pandey, Colton M. Miller, Edward N. Harris, and Paul H. Weigel

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Systems Perturbation Analysis of a Large-Scale Signal Transduction Model Reveals Potentially Influential Candidates for Cancer Therapeutics, Bhanwar Lal Puniya, Laura Allen, Colleen Hochfelde, Mahbubul Majumder, and Tomáš Helikar

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Alcoholic vs non-alcoholic fatty liver in rats: distinct differences in endocytosis and vesicle trafficking despite similar pathology, Karuna Rasineni, Daniel D. Penrice, Sathish Kumar Natarajan, Mark A. McNiven, Benita L. McVicker, Kusum K. Kharbanda, Carol A. Casey, and Edward N. Harris

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Structural Determinants Allowing Transferase Activity in SENSITIVE TO FREEZING 2, Classified as a Family I Glycosyl Hydrolase, Rebecca Roston, Kun Wang, Leslie A. Kuhn, and Christoph Benning

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Pluralistic and stochastic gene regulation: examples, models and consistent theory, Elisa N. Salas, Jiang Shu, Matyas F. Cserhati, Donald P. Weeks, and Istvan Ladunga

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Small-angle X-ray Scattering Studies of the Oligomeric State and Quaternary Structure of the Trifunctional Proline Utilization A (PutA) Flavoprotein from Escherichia coli, Ranjan K. Singh, John D. Larson, Weidong Zhu, Robert P. Rambo, Greg L. Hura, Donald F. Becker, and John J. Tanner

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Endoplasmic Reticulum-associated Degradation of Pca1p, a Polytopic Protein, via Interaction with the Proteasome at the Membrane, Nathan Smith, David J. Adle, Miaoyun Zhao, Xiaojuan Qin, Heejeong Kim, and Jaekwon Lee

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Endoplasmic Reticulum-associated Degradation of Pca1p, a Polytopic Protein, via Interaction with the Proteasome at the Membrane, Nathan Smith, David J. Adle, Miaoyun Zhao, Xiaojuan Quin, Heejeong Kim, and Jaekwon Lee

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Cadmium and Secondary Structure-dependent Function of a Degron in the Pca1p Cadmium Exporter, Nathan Smith, Wenzhong Wel, Miaoyun Zhao, Xiaojuan Quin, Javier Seravalli, Heejeong Kim, and Jaekwon Lee

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Analysis of Oligomerization Properties of Heme a Synthase Provides Insights into Its Function in Eukaryotes, Samantha Swenson, Andrew Cannon, Nicholas J. Harris, Nicholas G. Taylor, Jennifer L. Fox, and Oleh Khalimonchuk

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Potassium and the K+/H+ Exchanger Kha1p Promote Binding of Copper to ApoFet3p Multi-copper Ferroxidase, Xiaobin Wu, Heejeong Kim, Javier Seravalli, Joseph J. Barycki, P. John Hart, David W. Gohara, Enrico Di Cera, Won Hee Jung, Daniel J. Kosman, and Jaekwon Lee

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Loss of exogenous androgen dependence by prostate tumor cells is associated with elevated glucuronidation potential, Brenna M. Zimmer, Michelle E. Howell, Qin Wei, Linlin Ma, Trevor Romsdahl, Eileen G. Loughman, Jonathan E. Markham, Javier Seravalli, Joseph J. Barycki, and Melanie A. Simpson

2015

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Triacylglycerol synthesis during nitrogen stress involves the prokaryotic lipid synthesis pathway and acyl chain remodeling in the microalgae Coccomyxa subellipsoidea, James W. Allen, Concetta C. DiRusso, and Paul N. Black

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Overexpression of alpha-synuclein at non-toxic levels increases dopaminergic cell death induced by copper exposure via modulation of protein degradation pathways, Annadurai Anandhan, Humberto Rodriguez-Rocha, Iryna Bohovych, Amy M. Griggs, Laura Zavala-Flores, Elsa M. Reyes-Reyes, Javier Seravalli, Lia A. Stanciu, Jaekwon Lee, Jean-Christophe Rochet, Oleh Khalimonchuk, and Rodrigo Franco

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Rapid metabolism of exogenous angiotensin II by catecholaminergic neuronal cells in culture media, Urmi Basu, Javier Seravalli, Nandakumar Madayiputhiya, Jiri Adamec, Adam J. Case, and Matthew C. Zimmerman

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Mitochondrial Protein Quality Control: The Mechanisms Guarding Mitochondrial Health, Iryna Bohovych, Sherine S.L. Chan, and Oleh Khalimonchuk

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Metalloprotease OMA1 Fine-tunes Mitochondrial Bioenergetic Function and Respiratory Supercomplex Stability, Iryna Bohovych, Mario R. Fernandez, Jennifer J. Rahn, Krista D. Stackley, Jennifer E. Bestman, Annadurai Anandhan, Rodrigo Franco, Steven M. Claypool, Robert E. Lewis, Sherine S.L. Chan, and Oleh Khalimonchuk

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Rerouting Cellular Electron Flux To Increase the Rate of Biological Methane Production, Jennie L. Catlett, Alicia M. Ortiz, and Nicole R. Baun

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Integrating Interactive Computational Modeling in Biology Curricula, Tomáš Helikar, Christine E. Cutucache, Lauren M. Dahlquist, Tyler A. Herek, Joshua J. Larson, and Jim A. Rogers

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Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution, Wilson Leung, Cheryl Bailey, and Participating Students and Faculty of the Genomics Education Partnership

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Hyaluronidase Hyal1 Increases Tumor Cell Proliferation and Motility through Accelerated Vesicle Trafficking, Caitlin O McAtee, Abigail R. Berkebile, Christian Elowsky, Teresa Fangman, Joseph J. Barycki, James K. Wahl III, Oleh Khalimonchuk, Naava Naslavsky, Steve Caplan, and Melanie A. Simpson

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S-Glutathionylation Enhances Human Cystathionine β-Synthase Activity Under Oxidative Stress Conditions, Wei-Ning Niu, Pramod Kumar Yadav, Jiri Adamec, and Ruma Banerjee

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Cytosolic Fe-S Cluster Protein Maturation and Iron Regulation Are Independent of the Mitochondrial Erv1/Mia40 Import System, Hatice K. Ozer, Adrienne C. Dlouhy, Jeremy D. Thornton, Jingjing Hu, Yilin Liu, Joseph J. Barycki, Janneke Balk, and Caryn E. Outten

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Correction for Sandai et al., The Evolutionary Rewiring of Ubiquitination Targets Has Reprogrammed the Regulation of Carbon Assimilation in the Pathogenic Yeast Candida albicans, Doblin Sandai, Zhikang Yin, Laura Selway, David Stead, Janet Walker, Michelle D. Leach, Iryna Bohovych, Iuliana V. Ene, Stavroula Kastora, Susan Budge, Carol A. Munro, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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First Evidence for Substrate Channeling between Proline Catabolic Enzymes A VALIDATION OF DOMAIN FUSION ANALYSIS FOR PREDICTING PROTEIN-PROTEIN INTERACTIONS, Nikhilesh Sanyal, Benjamin W. Arentson, John J. Tanner, and Donald F. Becker

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How Do Free-Living, Lerp-Forming, and Gall-Inducing Aphalaridae (Hemiptera: Psylloidea) Affect the Nutritional Quality of Eucalyptus Leaves?, Anamika Sharma, James Allen, Soundararajan Madhavan, Anantanarayanan Raman, Gary S. Taylor, and Murray J. Fletcher

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Chloroplast lipid transfer processes in Chlamydomonas reinhardtii involving a TRIGALACTOSYLDIACYLGLYCEROL 2 (TGD2) ortholog, Jaruswan Warakanont, Chia-Hong Tsai, Elena J.S. Michel, George R. Murphy III, Peter Y. Hsueh, Rebecca L. Roston, Barbara B. Sears, and Christoph Benning

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Phenotypic screening identifies Brefeldin A/Ascotoxin as an inducer of lipid storage in the algae Chlamydomonas reinhardtii, Nishikant Wase, Boqiang Tu, Paul N. Black, and Concetta C. DiRusso

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Overaccumulation of γ-Glutamylcysteine in a Jasmonate-Hypersensitive Arabidopsis Mutant Causes Jasmonate-Dependent Growth Inhibition, Hsin-Ho Wei, Martha Rowe, Jean-Jack M. Riethoven, Ryan Grove, Jiri Adamec, Yusuke Jikumaru, and Paul E. Staswick

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Proline Metabolism Increases katG Expression and Oxidative Stress Resistance in Escherichia coli, Lu Zhang, James R. Alfano, and Donald F. Becker

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A Multilaboratory Comparison of Calibration Accuracy and the Performance of External References in Analytical Ultracentrifugation, Huaying Zhao, Rodolfo Ghirlando, Carlos Alfonso, Fumio Arisaka, Ilan Attali, David L. Bain, et al. ..., Donald F. Becker, and Peter Schuck

2014

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Stress-triggered Activation of the Metalloprotease Oma1 Involves Its C-terminal Region and Is Important for Mitochondrial Stress Protection in Yeast, Iryna Bohovych, Garrett Donaldson, Sara Christianson, Nataliya Zahayko, and Oleh Khalimonchuk

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Stress adaptation in a pathogenic fungus, Alistair J. P. Brown, Susan Budge, Despoina Kaloriti, Anna Tillmann, Mette D. Jacobsen, Zhikang Yin, Iuliana V. Ene, Iryna Bohovych, Doblin Sandai, Stavroula Kastora, Joanna Potrykus, Elizabeth R. Ballou, Delma S. Childers, Shahida Shahana, and Michelle D. Leach

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The evolution of respiratory O2/NO reductases: An out-of-the-phylogenetic-box perspective, Anne-Lise Ducluzeau, Barbara Schoepp-Cothenet, Robert van Lis, Frauke Baymann, Michael J. Russell, and Wilfgang Nitschke

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Iron chaperones PCBP1 and PCBP2 mediate the metallation of the dinuclear iron enzyme deoxyhypusine hydroxylase, Avery Frey, Anjali Nandal, Jong Hwan Park, Pamela Smith, Toshiki Tabe, Moon-Suhn Ryu, Manik Ghosh, Jaekwon Lee, Tracey Rouault, Myung Hee Park, and Caroline Philpott

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Arabidopsis Cuticular Wax Biosynthesis Is Negatively Regulated by the DEWAX Gene Encoding an AP2/ERF-Type Transcription Factor, Young Sam Go, Hyojin Kim, Hae Jin Kim, and Mi Chung Suh

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A rapid live-cell ELISA for characterizing antibodies against cell surface antigens of Chlamydomonas reinhardtii and its use in isolating algae from natural environments with related cell wall components, Wenzhi Jiang, Sarah Cossey, Julian N. Rosenberg, George A. Oyler, Bradley J.S.C. Olson, and Donald P. Weeks

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Mechanisms Underlying the Exquisite Sensitivity of Candida albicans to Combinatorial Cationic and Oxidative Stress That Enhances the Potent Fungicidal Activity of Phagocytes, Despoina Kaloriti, Mette Jacobsen, Zhikang Yin, Miranda Patterson, Anna Tillmann, Deborah A. Smith, Emily Cook, Tao You, Melissa J. Grimm, Iryna Bohovych, Celso Grebogi, Brahm H. Segal, Neil A.R. Gow, Ken Haynes, Janet Quinn, and Alistair J.P. Brown

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Sensitivity analysis of biological Boolean networks using information fusion based on nonadditive set functions, Naomi Kochi, Tomáš Helikar, Laura Allen, Jim A. Rogers, Zhenyuan Wang, and Mihaela T. Matache

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Plant Acyl-CoA:Lysophosphatidylcholine Acyltransferases (LPCATs) Have Different Specificities in Their Forward and Reverse Reactions, Ida Lager, Jenny Lindberg Yilmaz, Xue-Rong Zhou, Katarzyna Jasieniecka, Michael Kazachkov, Peng Wang, Jitao Zou, Randall Weselake, Mark A. Smith, Shen Bayon, John M. Dyer, Jay Shockey, Ernst Heinz, Allan Green, Antoni Banas, and Sten Stymne

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Proline Biosynthesis Is Required for Endoplasmic Reticulum Stress Tolerance in Saccharomyces cerevisiae, Xinwen Liang, M. B. Dickman, and Donald F. Becker

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A Multienzyme Complex Channels Substrates and Electrons through Acetyl-CoA and Methane Biosynthesis Pathways in Methanosarcina, Dillon J. Lieber, Jennifer Catlett, Nandu Madayiputhiya, Renu Nandakumar, Madeline M. Lopez, William W. Metcalf, and Nicole R. Buan

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Emerging regulatory paradigms in glutathione metabolism, Yilin Liu, Annastasia S. Hyde, Melanie A. Simpson, and Joseph J. Barycki

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Emerging roles for hyaluronidase in cancer metastasis and therapy, Caitlin O. McAtee, Joseph J. Barycki, and Melanie A. Simpson

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Evidence for Hysteretic Substrate Channeling in the Proline Dehydrogenaseand ∆1-Pyrroline-5-carboxylate Dehydrogenase Coupled Reaction of Proline UtilizationA(PutA), Michael A Moxley, Nikhilesh Sanyal, Navasona Krishnan, John J. Tanner, and Donald F. Becker

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Comparative Analyses of Three Chlorella Species in Response to Light and Sugar Reveal Distinctive Lipid Accumulation Patterns in the Microalga C. sorokiniana, Julian N. Rosenberg, Naoko Kobayashi, Austin Barnes, Eric A. Noel, Michael J. Betenbaugh, and George A. Oyler

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A Course-Based Research Experience: How Benefits Change with Increased Investment in Instructional Time, Christopher D. Shaffer, Cheryl Bailey, and Students and TAs in Genomics Education Partnership courses

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New Clox Systems for Rapid and Efficient Gene Disruption in Candida albicans, Shahida Shahana, Delma S. Childers, Elizabeth R. Ballou, Iryna Bohovych, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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Protein/Protein Interactions in the Mammalian Heme Degradation Pathway HEME OXYGENASE-2, CYTOCHROME P450 REDUCTASE, AND BILIVERDIN REDUCTASE, Andrea L. M. Spencer, Ireena Bagai, Donald F. Becker, Erik R. P. Zuiderweg, and Stephen W. Ragsdale

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Protein/Protein Interactions in the Mammalian Heme Degradation Pathway: Heme Oxygenase-2, Cytochrome P450 Reductase, and Biliverdin Reductase, Andrea L. M. Spencer, Ireena Bagai, Donald F. Becker, Erik R. P. Zuiderweg, and Stephen W. Ragsdale

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Preliminary joint X-ray and neutron protein crystallographic studies of ecDHFR complexed with folate and NADP+, Qun Wan, Audrey Y. Kovalevsky, Mark A. Wilson, Brad C. Bennett, Paul Langan, and Chris Dealwis

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Efficient CRISPR/Cas9-Mediated Gene Editing in Arabidopsis thaliana and Inheritance of Modified Genes in the T2 and T3 Generations, Donald P. Weeks, Bing Yang, and WenZhi Jiang

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Book Review of Dane Kennedy, The Last Blank Spaces: Exploring Africa and Australia, Adrian S. Wisnicki

2013

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Effect of salts on the Co-fermentation of glucose and xylose by a genetically engineered strain of Saccharomyces cerevisiae, Elizabeth Casey, Nathan S. Mosier, Jiri Adamec, Zachary Stockdale, Nancy Ho, and Miroslav Sedlak

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Functional convergence of structurally distinct thioesterases from cyanobacteria and plants involved in phylloquinone biosynthesis, Fabienne Furt, William J. Allen, Joshua R. Widhalm, Peter Madzelan, Robert C. Rizzo, Gilles J. Basset, and Mark A. Wilson

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UDP-glucose Dehydrogenase Activity and Optimal Downstream Cellular Function Require Dynamic Reorganization at the Dimer-Dimer Subunit Interfaces, Annastasia S. Hyde, Ashley M. Thelen, Joseph J. Barycki, and Melanie A. Simpson

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Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice, Wen Zhi Jiang, Huanbin Zhou, Honghao Bi, Michael E. Fromm, Bing Yang, and Donald P. Weeks

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Rapid Detection and Quantification of Triacylglycerol by HPLC–ELSD in Chlamydomonas reinhardtii and Chlorella Strains, Naoko Kobayashi, Eric A. Noel, Austin Barnes, Julian Rosenberg, Concetta C. DiRusso, Paul Black, and George A. Oyler

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Probing Arabidopsis Chloroplast Diacylglycerol Pools by Selectively Targeting Bacterial Diacylglycerol Kinase to Suborganellar Membranes, Bagyalakshmi Muthan, Rebecca Roston, John E. Froehlich, and Christoph Benning

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The Hyaluronan Receptor for Endocytosis (HARE) Activates NF-κB-mediated Gene Expression in Response to 40–400-kDa, but Not Smaller or Larger, Hyaluronans, Madhu S. Pandey, Bruce A. Baggenstoss, Jennifer Washburn, Edward N. Harris, and Paul H. Weigel

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Reporters for the analysis of N-glycosylation in Candida albicans, Shahida Shahana, Hector M. Mora-Montes, Luis Castillo, Iryna Bohovych, Chirag C. Sheth, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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Mushroom Ganoderma lucidum Prevents Colitis- Associated Carcinogenesis in Mice, Daniel Sliva, Jagadish Loganathan, Jiahua Jiang, Andrej Jedinak, John G. Lamb, Colin Terry, Lee Ann Baldridge, Jiri Adamec, George E. Sandusky, and Shailesh Dudhgaonkar

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Diversity of Plant Methionine Sulfoxide Reductases B and Evolution of a Form Specific for Free Methionine Sulfoxide, Dung Tien Le, Lionel Tarrago, Yasuko Watanabe, Alaattin Kaya, Byung Cheon Lee, Uyen Tran, Rie Nishiyama, Dmitri E. Fomenko, Vadim N. Gladyshev, and Lam-Son Phan Tran

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Cytochrome b5 Reductase Encoded by CBR1 Is Essential for a Functional Male Gametophyte in Arabidopsis, Laura L. Wayne, James G. Wallis, Rajesh Kumar, Jonathan E. Markham, and John Browse

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Book Review of Janine Barchas, Matters of Fact in Jane Austen: History, Location, and Celebrity, Laura White

2012

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Activation of the Carbon Concentrating Mechanism by CO2 Deprivation Coincides with Massive Transcriptional Restructuring in Chlamydomonas reinhardtii, Andrew J. Brueggeman, Dayananda S. Gangadharaiah, Matyas F. Cserhati, David Casero, Donald P. Weeks, and Istvan Ladunga

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A role for BELLRINGER in cell wall development is supported by loss-of-function phenotypes, J Peter Etchells, Lucy Moore, Wen Zhi Jiang, Helen Prescott, Richard Capper, Nigel J. Saunders, Anuj M. Bhatt, and Hugh G. Dickinson

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Urinary Copper Elevation in a Mouse Model of Wilson’s Disease Is a Regulated Process to Specifically Decrease the Hepatic Copper Load, Lawrence W. Gray, Fangyu Peng, Shannon A. Molloy, Venkata S. Pendyala, Abigael Muchenditsi, Otto Muzik, Jaekwon Lee, Jack H. Kaplan, and Svetlana Lutsenko

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UDP-glucose Dehydrogenase Polymorphisms from Patients with Congenital Heart Valve Defects Disrupt Enzyme Stability and Quaternary Assembly, Annastasia S. Hyde, Erin L. Farmer, Katherine E. Easley, Kristy van Lammeren, Vincent M. Christoffels, Joseph J. Barycki, Jeroen Bakkers, and Melanie A. Simpson

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Cross Regulation of Sirtuin 1, AMPK, and PPARy in Conjugated Linoleic Acid Treated Adipocytes, Shan Jiang, Wei Wang, Jess Miner, and Michael E. Fromm

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Selective Oma1 Protease-mediated Proteolysis of Cox1 Subunit of Cytochrome Oxidase in Assembly Mutants, Oleh Khalimonchuk, Mi-Young Jeong, Talina Watts, Elliott Ferris, and Dennis R. Winge

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Oligomerization of Heme o Synthase in Cytochrome Oxidase Biogenesis Is Mediated by Cytochrome Oxidase Assembly Factor Coa2, Oleh Khalimonchuk, Hyung Kim, Talina Watts, Xochitl Perez-Martinez, and Dennis R. Winge

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High-efficiency TALEN-based gene editing produces disease-resistant rice, Ting Li, Martin H. Spalding, Donald P. Weeks, and Bing Yang

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Composition and Evolution of the Vertebrate and Mammalian Selenoproteomes, Marco Mariotti, Perry G. Ridge, Yan Zhang, Alexei V. Lobanov, Thomas H. Pringle, Roderic Guigo, Dolph L. Hatfield, and Vadim N. Gladyshev

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Small but Crucial: The Novel Small Heat Shock Protein Hsp21 Mediates Stress Adaptation and Virulence in Candida albicans, Francois L. Mayer, Duncan Wilson, Ilse D. Jacobsen, Pedro Miramón, Silvia Slesiona, Iryna Bohovych, Alistair J.P. Brown, and Bernhard Hube

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Cellular Responses of Candida albicans to Phagocytosis and the Extracellular Activities of Neutrophils Are Critical to Counteract Carbohydrate Starvation, Oxidative and Nitrosative Stress, Pedro Miramón, Christine Dunker, Hanna Windecker, Iryna Bohovych, Alistair J.P. Brown, Oliver Kurzai, and Bernhard Hube

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Probing Structural Selectivity of Synthetic Heparin Binding to Stabilin Protein Receptors, Elizabeth H. Pempe, Yongmei Xu, Sandhya Gopalakrishnan, Jian Liu, and Edward N. Harris

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Dengue Virus Infection Perturbs Lipid Homeostasis in Infected Mosquito Cells, Rushika Perera, Catherine Riley, Giorgis Isaac, Amber S. Hopf-Jannasch, Ronald J. Moore, Karl W. Weitz, Ljiljana Pasa-Tolic, Thomas O. Metz, Jiri Adamec, and Richard J. Kuhn

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TGD1, -2, and -3 Proteins Involved in Lipid Trafficking Form ATP-binding Cassette (ABC) Transporter with Multiple Substrate-binding Proteins, Rebecca Roston, Jinpeng Gao, Monika W. Murcha, James Whelan, and Christoph Benning

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The Evolutionary Rewiring of Ubiquitination Targets Has Reprogrammed the Regulation of Carbon Assimilation in the Pathogenic Yeast Candida albicans, Doblin Sandai, Zhikang Yin, Laura Selway, David Stead, Janet Walker, Michelle D. Leach, Iryna Bohovych, Iuliana V. Ene, Stavroula Kastora, Susan Budge, Carol A. Munro, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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Knockout of the 15 kDa Selenoprotein Protects against Chemically-Induced Aberrant Crypt Formation in Mice, Petra A. Tsuji, Bradley A. Carlson, Salvador Naranjo-Suarez, Min-Hyuk Yoo, Xue-Ming Xu, Dmitri E. Fomenko, Vadim Gladyshev, Dolph L. Hatfield, and Cindy D. Davis

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Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779, Astrid Vieler, Guangxi Wu, Chia-Hong Tsai, Blair Bullard, Adam J. Cornish, Christopher Harvey, Ida-Barbara Reca, Chelsea Thornburg, Rujira Achawanantakun, Christopher J. Buehl, Michael S. Campbell, David Cavalier, Kevin L. Childs, Teresa J. Clark, Rahul Deshpande, Erika Erickson, Ann Armenia Ferguson, Witawas Handee, Que Kong, Xiaobo Li, Bensheng Liu, Steven Lundback, Cheng Peng, Rebecca Roston, Michigan State University, Jeffrey P. Simpson, Allan TerBush, Jaruswan Warakanont, Simone Zäuner, Eva M. Farre, Eric L. Hegg, Ning Jiang, Min-Hao Kuo, Yan Lu, Krishna K. Niyogi, John Ohlrogge, Katherine W. Osteryoung, Yair Shachar-Hill, Barbara B. Sears, Yanni Sun, Hideki Takahashi, Mark Yandell, Shin-Han Shiu, and Christoph Benning

2011

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Development and optimization of an LC-MS/MS-based method for simultaneous quantification of vitamin D2, vitamin D3, 25- hydroxyvitamin D2 and 25-hydroxyvitamin D3, Jiri Adamec, Amber Jannasch, Jianjie Huang, Emily Hohman, James C. Fleet, Munro Peacock, Mario G. Ferruzzi, Berdine Martin, and Connie M. Weaver

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Sphingolipids in the Root Play an Important Role in Regulating the Leaf Ionome in Arabidopsis thaliana, Dai-Yin Chao, Kenneth Gable, Ming Chen, Ivan Baxter, Charles R. Dietrich, Edgar B. Cahoon, Mary Lou Guerinot, Brett Lahner, Shiyu Lu, Jonathan E. Markham, Joe Morrissey, Gongshe Han, Sita Gupta, Jeffrey M. Harmon, Jan G. Jaworski, Teresa M. Dunn, and David E. Salt

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phot1 Inhibition of ABCB19 Primes Lateral Auxin Fluxes in the Shoot Apex Required For Phototropism, John M. Christie, Haibing Yang, Gregory L. Ritcher, Stuart Sullivan, Catriona E. Thomson, Jinshan Lin, Boosaree Titapiwatanakun, Margaret Ennis, Eirini Kaiserli, Ok Ran Lee, Jiri Adamec, Wendy A. Peer, and Angus S. Murphy

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Thiol peroxidases mediate specific genome-wide regulation of gene expression in response to hydrogen peroxide, Dmitri E. Fomenko, Ahmet Koc, Natalia Agisheva, Michael Jacobsen, Alaattin Kaya, Mikalai Malinouski, Julian C. Rutherford, Kam-Leung Siu, Dong-Yan Jin, Dennis R. Winge, and Vadim N. Gladyshev

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Genome-wide ribosome profiling reveals complex translational regulation in response to oxidative stress, Maxim V. Gerashchenko, Alexei V. Lobanov, and Vadim N. Gladyshev

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Defining a relationship between dietary fatty acids and the cytochrome P450 system in a mouse model of fatty liver disease, Monika Gonzalez, Whitney Sealls, Elliot D. Jesch, M. Julia Brosnan, Istvan Ladunga, Xinxin Ding, Paul N. Black, and Concetta C. DiRusso