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2020

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Identification of Simplified Microbial Communities That Inhibit Clostridioides difficile Infection through Dilution/Extinction, Jennifer M. Auchtung, Eva C. Preisner, James Collins, Armando I. Lerma, and Robert A. Britton

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Desiccation tolerance in streptophyte algae and the algae to land plant transition: evolution of LEA and MIP protein families within the Viridiplantae, Burkhard Becker, Xuehuan Feng, Yanbin Yin, and Andreas Holzinger

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The Trait Repertoire Enabling Cyanobacteria to Bloom Assessed through Comparative Genomic Complexity and Metatranscriptomics, Huansheng Cao, Yohei Shimura, Morgan M. Steffen, Zhou Yang, Jingrang Lu, Allen Joel, Landon Jenkins, Masanobu Kawachi, Yabin Yin, and Ferran Garcia-Pichel

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Polyanhydride Nanoparticles Induce Low Inflammatory Dendritic Cell Activation Resulting in CD8+ T Cell Memory and Delayed Tumor Progression, Ross Darling, Sujata Senapati, John Christiansen, Luman Liu, Amanda E. Ramer-Tati, Balaji Narasimhan, and Michael Wannemuehler

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Integrating the Ecosystem Services Framework to Define Dysbiosis of the Breastfed Infant Gut: The Role of B. infantis and Human Milk Oligosaccharides, Rebbeca M. Duar, Bethany M. Henrick, Giorgio Casaburi, and Steven A. Frese

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Phytochemical characterization of ultrasound-processed sorghum sprouts for the use in functional foods, Sadia Hassan, Muhammad Imran, Muhammad Haseeb Ahmad, Muhammad Imran Khan, Changmou XU, Muhammad Kamran Khan, and Niaz Muhammad

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A high-throughput LC-MS/MS method for the measurement of the bile acid/salt content in microbiome-derived sample sets, Thomas D. Horvath, Sigmund J. Haidacher, Kathleen M. Hoch, Jennifer M. Auchtung, and Anthony M. Haag

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Integration of sodium hypochlorite pretreatment with co-immobilized microalgae/bacteria treatment of meat processing wastewater, Xinjuan Hu, Yulie Meneses, and Ashraf Aly Hassan

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HumidOSH: A self-contained environmental chamber with controls for relative humidity and fan speed, Soon Kiat Lau and Jeyamkondan Subbiah

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TDT Sandwich: An open source dry heat system for characterizing the thermal resistance of microorganisms, Soon Kiat Lau and Jeyamkondan Subbiah

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Prebiotic-Induced Anti-tumor Immunity Attenuates Tumor Growth, Yan Li, Lisa Elmen, Igor Segota, Yibo Xian, Roberto Tinoco, Tinoco Feng, Yu Fujita, Rafael R. Segura Munoz, Robert J. Schmaltz, Linda M. Bradley, Amanda Ramer-Tait, Raphy Zarecki, Tao Long, Scott N. Peterson, and Ze’ev A. Ronai

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Microbiota in vitro modulated with polyphenols shows decreased colonization resistance against Clostridioides difficile but can neutralize cytotoxicity, Aleksander Mahnic, Jennifer M. Auchtung, Nataša Poklar Ulrih, Robert A. Britton, and Maja Rupnik

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Insights into the Genetic Architecture of Bran Friability and Water Retention Capacity, Two Important Traits for Whole Grain End-Use Quality in Winter Wheat, Sviatoslav Navrotskyi, Vikas Belamkar, P. Stephen Baenziger, and Devin J. Rose

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Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men, Long H. Nguyen, Wenjie Ma, Dong D. Wang, Yin Cao, Himel Mallick, Teklu K. Gerbaba, Jason Lloyd-Price, Galeb Abu-Ali, A. Brantley Hall, Daniel Sikavi, David A. Drew, Raaj S. Mehta, Cesar Arze, Amit D. Joshi, Yan Yan, Tobyn Branck, Casey DuLong, Kerry L. Ivey, Shuji Ogino, Eric B. Rimm, Mingyang Song, Wendy S. Garrett, Jacques Izard, Cutis Huttenhower, and Andrew T. Chan

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Determinations of the peroxidative susceptibilities of cod liver oils by a newly-developed 1H NMR-based method: resistance of an antioxidant-fortified product isolated from pre-fermented sources, B. C. Percival, R. Zbasnik, V. Schlegel, M. Edgar, J. Zhang, and M. Grootveld

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Evaluations of the Peroxidative Susceptibilities of Cod Liver Oils by a 1H NMR Analysis Strategy: Peroxidative Resistivity of a Natural Collagenous and Biogenic Amine-Rich Fermented Product, Benita C. Percival, Angela Wann, Richard Zbasnik, Vicki Schlegel, Mark Edgar, Jie Zhang, Gilbert Ampem, Philippe Wilson, Adam Le Gresley, Declan Naughton, and Martin Gootveld

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Wild primate microbiomes prevent weight gain in germ-free mice, Dimitrios N. Sidiropoulos, Gabriel A. Al-Ghalith, Robin R. Shields-Cutler, Tonya L. Ward, Abigail J. Johnson, Pajau Vangay, Dan Knights, Purna C. Kashyap, Yibo Xian, Amanda E. Ramer-Tait, and Jonathan B. Clayton

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Chronological set of E. coli O157:H7 bovine strains establishes a role for repeat sequences and mobile genetic elements in genome diversification, Eliot Stanton, Taylor A. Wahlig, Dongjin Park, and Charles W. Kaspar

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Genetic and Functional Analyses of Virulence Potential of an Escherichia coli O157:H7 Strain Isolated From Super-Shedder Cattle, Lin Teng, Shinyoung Lee, Dongjin Park, and Kwangcheol Casey Jeong

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AcrFinder: genome mining anti-CRISPR operons in prokaryotes and their viruses, Haidong Yi, Le Huang, Bowen Yang, Javi Gomez, Han Zhang, and Yanbin Yin

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Sex Bias in Gut Microbiome Transmission in Newly Paired Marmosets (Callithrix jacchus), Lifeng Zhu, Jonathan B. Clayton, Mallory J. Suhr Van Haute, Qinnan Yang, Haley R. Hassenstab, Aaryn C. Mustoe, Dan Knights, Andrew K. Benson, and Jeffrey A. French

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Fecal Short-Chain Fatty Acid Concentrations Increase in Newly Paired Male Marmosets (Callithrix jacchus), Lifeng Zhu, Mallory J. Suhr Van Haute, Haley R. Hassenstab, Caroline Smith, Devin J. Rose, Aaryn C. Must, Andrew K. Benson, and Jeffrey A. French

2019

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Histone acetylation increases in response to ferulic, gallic, and sinapic acids acting synergistically in vitro to inhibit Candida albicans yeast‐to‐hyphae transition, Cristiane R. S. Câmara, Qin-Yin Shi, Matthew Pedersen, Richard Zbasnik, Kenneth Nickerson, and Vicki Schlegel

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Long-term use of antibiotics and risk of colorectal adenoma, Yin Cao, Kana Wu, Raaj Mehta, David A. Drew, Mingyang Song, Paul Lochhead, Long H. Nguyen, Jacques Izard, Charles S. Fuchs, Wendy S. Garrett, Curtis Huttenhower, Shuji Ogino, Edward L. Giovannucci, and Andrew T. Chan

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Keeping Allergen Names Clear and Defined, Sanny K. Chan, Anna Pomés, Christiane Hilger, Janet M. Davies, Geoffrey Mueller, Annette Kuehn, Andreas L. Lopata, Gabriele Gadermaier, Marianne van Hage, Monika Raulf, and Richard E. Goodman

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Genomic Variations Underlying Speciation and Niche Specialization of Shewanella baltica, Jie Deng, Jennifer M. Auchtung, Konstantinos T. Konstantinidis, Ingrid Brettar, Manfred G. Höfle, and James M. Tiedje

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Orphan Genes Shared by Pathogenic Genomes Are More Associated with Bacterial Pathogenicity, Sarah Entwistle and Yanbin Yin

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Mycoprotein: The Future of Nutritious Nonmeat Protein, a Symposium Review, Tim JA Finnigan, Benjamin T. Wall, Peter J. Wilde, Francis B. Stephens, Steve Taylor, and Marjorie R. Freedman

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Cell Wall Enzymes in Zygnema circumcarinatum UTEX 1559 Respond to Osmotic Stress in a Plant-Like Fashion, Elisabeth Fitzek, Lauren Orton, Sarah Entwistle, W. Scott Grayburn, Catherine Ausland, Melvin R. Duvall, and Yanbin Yin

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Formation of Low-Density and Free-Flowing Hollow Microparticles from Butter and Fractionated Palm Oil Mixture, Joshua Gudeman, Junsi Yang, and Ozan Ciftci

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TLR10 Senses HIV-1 Proteins and Significantly Enhances HIV-1 Infection, Bethany M. Henrick, Xiao-Dan Yao, Muhammad Atif Zahoor, Alash’le Abimiku, Sophia Osawe, and Kenneth L. Rosenthal

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Nitrogen, Cobalt Co-doped Fluorescent Magnetic Carbon Dots as Ratiometric Fluorescent Probes for Cholesterol and Uric Acid in Human Blood Serum, Shan Huang, Erli Yang, Jiandong Yao, Xu Chu, Yi Liu, Yue Zhang, and Qi Xiao

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Role of Dietary Flavonoid Compounds in Driving Patterns of Microbial Community Assembly, Kerry L. Ivey, Andrew T. Chan, Jacques Izard, Aedin Cassidy, Geraint B. Rogers, and Eric B. Rimm

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Gene Expression Value Prediction Based on XGBoost Algorithm, Wei Li, Yanbin Yin, Xiongwen Quan, and Han Zhang

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Gut microbiota dependent anti-tumor immunity restricts melanoma growth in Rnf5−/− mice, Yan Li, Roberto Tinoco, Lisa Elmén, Igor Segota, Yibo Xian, Yu Fujita, Avinash Sahu, Raphy Zarecki, Kerrie Marie, Yongmei Feng, Ali Khateb, Dennie T. Frederick, Shiri K. Ashkenazi, Hyungsoo Kim, Eva Guijarro Perez, Chi-Ping Day, Rafael S. Segura Muñoz, Robert Schmaltz, Shibu Yooseph, Miguel A. Tam, Tongwu Zhang, Emily Avitan-Hersh, Lihi Tzur, Shoshana Roizman, Ilanit Boyango, Gil Bar-Sela, Amir Orian, Randal J. Kaufman, Marcus Bosenberg, Colin R. Goding, Bas Baaten, Mitchell P. Levesque, Reinhard Dummer, Kevin Brown, Glenn Merlino, Eytan Ruppin, Keith Flaherty, Amanda Ramer-Tait, Tao Long, Scott N. Peterson, Linda M. Bradley, and Ze’ev A. Ronai

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Prophylactic effects of isomaltodextrin in a Balb/c mouse model of egg allergy, Yoshinori Mine, Yan Jin, Hua Zhang, Prithy Rupa, Kaustav Majumder, Takeo Sakurai, Yoshifumi Taniguchi, Ryodai Takagaki, Hikaru Watanabe, and Hitoshi Mitsuzumi

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Experimental Evidence for Adaptation to Species-Specific Gut Microbiota in House Mice, Andrew H. Moeller, João C. Gomes-Neto, Sara Mantz, Hatem Kittana, Rafael R. Segura Munoz, Robert J. Schmaltz, Amanda E. Ramer-Tait, and Michael W. Nachman

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Postharvest heat treatments to inhibit Penicillium digitatum growth and maintain quality of Mandarin (Citrus reticulata blanco), Diana B. Queb-Gonzalez, Aurelio Lopez-Malo, María E. Sosa-Morales, and Rossana Villa-Rojas

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Corrigendum: Use of UV Treated Milk Powder to Increase Vaccine Efficacy in the Elderly, Sara Schaefer, Kasper Arthur Hettinga, James Cullor, J. Bruce German, and Bethany M. Henrick

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Hydrodistillation Extraction Kinetics Regression Models for Essential Oil Yield and Composition in Juniperus virginiana, J. excelsa, and J. sabina, Ivanka B. Semerdjieva, Santosh Shiwakoti, Charles L. Cantrell, Valtcho D. Zheljazkov, Tess Astatkie, Vicki L. Schlegel, and Tzenka Radoukova

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Antimicrobial peptide identification using multi-scale convolutional network, Xin Su, Jing Xu, Yanbin Yin, Xiongwen Quan, and Han Zhang

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A novel and green nanoparticle formation approach to forming low-crystallinity curcumin nanoparticles to improve curcumin’s bioaccessibility, Ali Ubeyitogullari and Ozan Ciftci

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In vitro bioaccessibility of novel low-crystallinity phytosterol nanoparticles in non-fat and regular-fat foods, Ali Ubeyitogullari and Ozan Ciftci

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In Vitro Bioaccessibility of Low-Crystallinity Phytosterol Nanoparticles Generated Using Nanoporous Starch Bioaerogels, Ali Ubeyitogullari, Regis Moreau, Devin J. Rose, and Ozan Ciftci

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Candida albicans quorum-sensing molecule farnesol modulates staphyloxanthin production and activates the thiol-based oxidative-stress response in Staphylococcus aureus, Taissa Vila, Eric F. Kong, Ahmed Ibrahim, Kurt Piepenbrink, Amol C. Shetty, Carrie McCracken, Vincent Bruno, and Mary Ann Jabra-Rizk

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Extraction of astaxanthin from engineered Camelina sativa seed using ethanol-modified supercritical carbon dioxide, Liyang Xie, Edgar B. Cahoon, Yue Zhang, and Ozan Ciftci

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Bioinformatics Identification of Anti-CRISPR Loci by Using Homology, Guilt-by-Association, and CRISPR Self-Targeting Spacer Approaches, Yanbin Yin, Bowen Yang, and Sarah Entwistle

2018

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Algal Bloom Expansion Increases Cyanotoxin Risk in Food, Niam M. Abeysiriwardena, Samuel J. L. Gascoigne, and Angela Anandappa

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Metatranscriptome of human faecal microbial communities in a cohort of adult men, Galeb S. Abu-Ali, Raaj S. Mehta, Jason Lloyd-Price, Himel Mallick, Tobyn Branck, Kerry L. Ivey, David A. Drew, Casey DuLong, Eric Rimm, Jacques Izard, Andrew T. Chan, and Curtis Huttenhower

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Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi, Thomas A. Auchtung, Tatiana Y. Fofanova, Christopher J. Stewart, Andrea K. Nash, Matthew C. Wong, Jonathan R. Gesell, Jennifer M. Auchtung, Nadim J. Ajami, and Joseph F. Petrosino

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Development of omega-3-rich Camelina sativa seed oil emulsions, Henok D. Belayneh, Randy L. Wehling, Yue Zhang, and Ozan N. Ciftci

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Colonization of breastfed infants by Bifidobacterium longum subsp. infantis EVC001 reduces virulence gene abundance, Giorgio Casaburi and Steven A. Frese

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Food-Derived Bioactive Peptides in Human Health: Challenges and Opportunities, Subhadeep Chakrabarti, Snigdha Guha, and Kaustav Majumder

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Food processing environment surveillance using amplicon metagenomics: Assessing the change in the microbiome of a fluid milk processing facility before and after cleaning, Sapna Chitlapilly Dass, Bing Wang, Jayne E. Stratton, Andreia Bianchini, and Angela Ababdappa

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Divergence in Gene Regulation Contributes to Sympatric Speciation of Shewanella baltica Strains, Jie Deng, Jennifer M. Auchtung, Konstantinos T. Konstantinidis, Alejandro Caro-Quintero, Ingrid Brettar, Manfred Hofle, and James M. Tiedje

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Microstructural changes to proso millet protein bodies upon cooking and digestion, Paridhi Gulati, You Zhou, Christian Elowsky, and Devin J. Rose

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Elevated Fecal pH Indicates a Profound Change in the Breastfed Infant Gut Microbiome Due to Reduction of Bifidobacterium over the Past Century, Bethany M. Henrick, Andra A. Hutton, Michelle C. Palumbo, Giorgio Casaburi, Ryan D. Mitchell, Mark A. Underwood, Jennifer T. Smilowitz, and Steven A. Frese

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Reduced colonic mucin degradation in breastfed infants colonized by Bifidobacterium longum subsp. infantis EVC001, Sercan Karav, Giorgio Casaburi, and Steven A. Frese

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Commensal Escherichia coli Strains Can Promote Intestinal Inflammation via Differential Interleukin-6 Production, Hatem Kittana, Joao Carlos Gomes-Neto, Kari Heck, Abby L. Geis, Rafael R. Segura Munoz, Liz A. Cody, Robert J. Schmaltz, Laure B. Bindels, Rohita Sinha, Jesse M. Hostetter, Andrew K. Benson, and Amanda E. Ramer-Tait

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Role of whole grains versus fruits and vegetables in reducing subclinical inflammation and promoting gastrointestinal health in individuals affected by overweight and obesity: a randomized controlled trial, Julianne C. Kopf, Mallory J. Suhr, Jennifer L. Clarke, Seong-il Eyun, Jean-Jack M. Riethoven, Amanda E. Ramer-Tait, and Devin J. Rose

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Release of Major Peanut Allergens from Their Matrix under Various pH and Simulated Saliva Conditions—Ara h2 and Ara h6 Are Readily Bio-Accessible, Stef J. Koppelman, Mieke Smits, Monic Tomassen, Govardus A.H. de Jong, Joseph L. Baumert, Steve L. Taylor, Renger Witkamp, Robert Jan Veldman, Raymond Pieters, and Harry J. Wichers

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Probiotic Bifidobacterium strains and galactooligosaccharides improve intestinal barrier function in obese adults but show no synergism when used together as synbiotics, Janina A. Krumbeck, Heather E. Rasmussen, Robert W. Hutkins, Jennifer L. Clarke, Krista Shawron, Ali Keshavarzian, and Jens Walter

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Characterization of Food Structures and Functionalities, Xingxun Liu, Ying Yang, Changmou Xu, and Jiajia Rao

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The MSDIN family in amanitin-producing mushrooms and evolution of the prolyl oligopeptidase genes, Hong Luo, Qing Cai, Yungjiao Luli, Xuan Li, Rohita Sinha, Heather E. Hallen-Adams, and Zhu L. Yang

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Experimental evaluation of the importance of colonization history in early-life gut microbiota assembly, Inés Martínez, Maria X. Maldonado-Gomez, João Carlos Gomes-Neto, Hatem Kittana, Hua Ding, Robert J. Schmaltz, Payal Joglekar, Roberto Jiménez Cardona, Nathan L Marsteller, Steven W. Kembel, Andrew K. Benson, Daniel A. Peterson, Amanda Ramer-Tait, and Jens C. Walter

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Stability of the human faecal microbiome in a cohort of adult men, Raaj S. Mehta, David A. Drew, Jason Lloyd-Price, Ayshwarya Subramaian, Paul Lochhead, Amit D. Joshi, Kerry L. Ivey, Hamed Khalili, Gordon T. Brown, Casey DuLong, Mingyang Song, Long H. Nguyen, Himel Mallick, Eric B. Rimm, Jacques Izard, Curtis Huttenhower, Andrew T. Chan, and Galeb S. Abu-Ali

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Dietary Patterns and Risk of Colorectal Cancer Subtypes Classified by Fusobacterium nucleatum in Tumor Tissue, Raaj S. Mehta, Reiko Nishihara, Yin Cao, Mingyang Song, Kosuke Mima, Zhi Rong Qian, Jonathan A. Nowak, Keisuke Kosumi, Tsuyoshi Hamada, Yohei Masugi, Susan Bullman, David A. Drew, Aleksandar D. Kostic, Teresa T. Fung, Wendy S. Garrett, Curtis Huttenhower, Kana Wu, Jeffrey A. Meyerhardt, Xuehong Zhang, Walter C. Willett, Edward L. Giovannucci, Charles S. Fuchs, Andrew T. Chan, and Shuji Ogino

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Clinical and Genomic Characterization of Recurrent Enterococcal Bloodstream Infection in Patients With Acute Leukemia, Julia A. Messina, Rohita Sinha, Kimberly Starr, Mehreen Arshad, Barbara D. Alexander, Nelson J. Chao, and Anthony D. Sung

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The human brainome: network analysis identifies HSPA2 as a novel Alzheimer’s disease target, Vladislav A. Petyuk, Rui Chang, Manuel Ramirez-Restrepo, Noam D. Beckmann, Marc Y. R. Henrion, Paul D. Piehowski, Kuixi Zhu, Sven Wang, Jennifer L. Clarke, Matthew J. Huentelman, Fang Xie, Victor Andreev, Anzhelika Engel, Toumy Guettoche, Loida Navarro, Philip De Jager, Julie A. Schneider, Christopher M. Morris, Ian G. McKeith, Robert H. Perry, Simon Lovestone, Randall L. Woltjer, Thomas G. Beach, Lucia I. Sue, Geidy E. Serrano, Andrew P. Lieberman, Roger L. Albin, Isidre Ferrer, Deborah C. Mash, Christine M. Hulette, John F. Ervin, Eric M. Reiman, John A. Hardy, David A. Bennett, Eric Schadt, Richard D. Smith, and Amanda J. Myers

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WHO/IUIS Allergen Nomenclature: Providing a common language, Anna Pomes, Janet M. Davies, Gabriele Gadermaier, Christiane Hilger, Thomas Holzhauser, Jonas Lidholm, Andreas L. Lopata, Geoffrey A. Mueller, Andreas Nandy, Christian Radauer, Sanny K. Chan, Uta Jappe, Jorg Kleine-Tebbe, Wayne R. Thomas, Martin D. Chapman, Marianne van Hage, Ronald van Ree, Stefan Vieths, Monika Raulf, and Richard E. Goodman

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Changes in enzymatic activities and functionality of whole wheat flour due to steaming of wheat kernels, Rachana Poudel and Devin J. Rose

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Stability of the phenolic compounds and antioxidant capacity of five fruit (apple, orange, grape, pomelo and kiwi) juices during in vitro-simulated gastrointestinal digestion, Wei Quan, Yadan Tao, Mei Lu, Bo Yuan, Jie Chen, Maomao Zeng, Fang Qin, Fengxian Guo, and Zhiyoung He

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Computational modeling and functional characterization of a GgChi: A class III chitinase from corms of Gladiolus grandiflorus, Maria Rafiq, Ashiq Hussain, Kausar Hussain Shah, Qamar Saeed, Muhammad Umair Sial, Zahid Ali, Friedrich Buck, Richard E. Goodman, Binish Khaliq, Uzma Ishaq, Mirza Ahsen Baig, Aisha Munawar, Seema Mahmood, and Ahmed Akrem

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Fermented Foods as a Dietary Source of Live Organisms, Shannon Rezac, Car Reen Kok, Melanie Heermann, and Robert W. Hutkins

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Shared mechanisms among probiotic taxa: implications for general probiotic claims, Mary Ellen Sanders, Andrew K. Benson, Sarah Lebeer, Daniel J. Merenstein, and Todd R. Klaenhammer

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Shared mechanisms among probiotic taxa: implications for general probiotic claims, Mary Ellen Sanders, Andrew K. Benson, Sarah Lebeer, Daniel J. Merenstein, and Todd R. Klaenhammer

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Use of UV Treated Milk Powder to Increase Vaccine Efficacy in the Elderly, Sara Schaefer, Kasper Arthur Hettinga, James Cullor, J. Bruce German, and University of Nebraska - Lincoln

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Metabolic Syndrome, Gut Microbiome and Dietary Bioactive Peptides, an Unexplored Triad, Rohita Sinha, Jennifer Clarke, and Jean-Jack Riethoven

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Short term dynamics of the sputum microbiome among COPD patients, Rohita Sinha, Lisa A. Weissenburger-Moser, Jennifer L. Clarke, Lynette M. Smith, Art J. Heires, Debra J. Romberger, and Tricia LeVan

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Effects of tobacco smoke and electronic cigarette vapor exposure on the oral and gut microbiota in humans: a pilot study, Christopher J. Stewart, Thomas A. Auchtung, Nadim J. Ajami, Kenia Velasquez, Daniel P. Smith, Richard De La Garza II, Ramiro Salas, and Joseph F. Petrosino

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In Vitro Digestibility of Nanoporous Wheat Starch Aerogels, Ali Ubeyitogullari, Sandrayee Brahma, Devin J. Rose, and Ozan Ciftci

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Mind the gaps: how can food safety gaps be addressed in developing nations?, Jessie L. Vipham, Byron D. Chaves, and Valentina Trinetta

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Modification of wheat gluten for improvement of binding capacity with keratin in hair, Shukun Wang, Danyang Meng, Sisi Wang, Zhong Zhang, Ruijin Yang, and Wei Zhao

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Analysis of genetic and nongenetic factors influencing triglycerides-lowering drug effects based on paired observations, Zheng Xu, Qing Duan, Juan Cui, Yumou Qiu, Qidong Jia, Cong Wu, and Jennifer Clarke

2017

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Resistant starch can improve insulin sensitivity independently of the gut microbiota, Laure B. Bindels, Rafael R. Segura Munoz, João Carlos Gomes-Neto, Valentin Mutemberezi, Inés Martínez, Nuria Salazar, Elizabeth A. Cody, Maria I. Quintero-Villegas, Hatem Kittana, Clara G de los Reyes-Gavilán, Robert J. Schmaltz, Giulio G. Muccioli, Jens Walter, and Amanda E. Ramer-Tait

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The International Scientific Association for Probiotics and Prebiotics (ISAPP) Consensus Statement on the Definition and Scope of Prebiotics, Glenn R. Gibson, Robert W. Hutkins, Mary Ellen Sanders, Susan L. Prescott, Raylene A. Reimer, Seppo J. Salminen, Karen Scott, Catherine Stanton, Kelly S. Swanson, Patrice D. Cani, Kristin Verbeke, and Gregor Reid

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A gut pathobiont synergizes with the microbiota to instigate inflammatory disease marked by immunoreactivity against other symbionts but not itself, João Carlos Gomes-Neto, Hatem Kittana, Sara Mantz, Rafael R. Segura Munoz, Robert J. Schmaltz, Laure B. Bindels, Jennifer L. Clarke, Jesse M. Hostetter, Andrew K. Benson, Jens Walter, and Amanda Ramer-Tait

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A real-time PCR assay for accurate quantification of the individual members of the Altered Schaedler Flora microbiota in gnotobiotic mice, João Carlos Gomez-Neto, Sara Mantz, Kyler Held, Rohita Sinha, Rafael R. Segura Munoz, Robert Schmaltz, Andrew K. Benson, Jens Walter, and Amanda E. Ramer-Tait

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Endurance Exercise Increases Intestinal Uptake of the Peanut Allergen Ara h 6 after Peanut Consumption in Humans, Lonneke M. JanssenDuijghuijsen, Klaske van Norren, Sander Grefte, Stef J. Koppelman, Kaatje Lenaerts, Jaap Keijer, Renger F. Witkamp, and Harry J. Wichers

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Evaluating Potential Risks of Food Allergy and Toxicity of Soy Leghemoglobin Expressed in Pichia pastoris, Yuan Jin, Xiaoyun He, Kwame Andoh-Kumi, Rachel Z. Fraser, Mei Lu, and Richard E. Goodman

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The impact of the bovine faecal microbiome on Escherichia coli O157:H7 prevalence and enumeration in naturally infected cattle, M. Kim, L. A. Kuehn, J. L. Bono, E. D. Berry, N. Kalchayanand, H. C. Freetly, A. K. Benson, and J. E. Wells

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Lifestyle and Horizontal Gene Transfer- Mediated Evolution of Mucispirillum schaedleri, a Core Member of the Murine Gut Microbiota, Alexander Loy, Carina Pfann, Michaela Steinberger, Buck Hanson, Simone Herp, Sandrine Brugiroux, João Carlos Gomes Neto, Mark V. Boekschoten, Clarissa Schwab, Tim Urich, Amanda E. Ramer-Tait, Thomas Rattei, Bärbel Stecher, and David Berry

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The gut mycobiome of the Human Microbiome Project healthy cohort, Andrea K. Nash, Thomas A. Auchtung, Matthew C. Wong, Daniel P. Smith, Jonathan R. Gesell, Matthew C. Ross, Christopher J. Stewart, Ginger A. Metcalf, Donna M. Muzny, Richard A. Gibbs, Nadim J. Ajami, and Joseph F. Petrosino

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Subgingival Microbiome Colonization and Cytokine Production during Early Dental Implant Healing, Jeffrey B. Payne, Paul G. Johnson, Car Reen Kok, João Carlos Gomes-Neto, Amanda Ramer-Tait, Marian J. Schmid, and Robert W. Hutkins

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A critical assessment of the “sterile womb” and “in utero colonization” hypotheses: Implications for research on the pioneer infant microbiome, Maria Elisa Perez-Muñoz, Marie-Claire Arrieta, Amanda E. Ramer-Tait, and Jens Walter

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Review of Nutraceuticals and Functional Properties of Whole Wheat, Rachana Poudel and Madhav Bhatta

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Influence of Foliar Fungicide Treatment on Lipolytic Enzyme Activity of Whole Wheat, Rachana Poudel, Madhav Bhatta, Teshome Regassa, and Devin J. Rose

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Next-Generation Probiotics Targeting Clostridium difficile through Precursor- Directed Antimicrobial Biosynthesis, Jennifer K. Spinler, Jennifer Auchtung, Aaron Brown, Prapaporn Boonma, Numan Oezguen, Cana L. Ross, Ruth Ann Luna, Jessica Runge, James Versalovic, Alex Peniche, Sara M. Dann, Robert A. Britton, Anthony Haag, and Tor C. Savidge

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Epidemiological investigation of Candida species causing bloodstream infection in pediatric small bowel transplant recipients, Mallory J. Suhr, João Carlos Gomes-Neto, Nabaraj Banjara, Diana F. Florescu, David F. Mercer, Peter C. Iwen, and Heather E. Hallen-Adams

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The Host Microbiome Regulates and Maintains Human Health: A Primer and Perspective for Non-Microbiologists, Sunil Thomas, Jacques Izard, Emily Walsh, Kristen Batich, Pakawat Chongsathidkiet, Gerard Clarke, David A. Sela, Alexander J. Muller, James M. Mullin, Korin Albert, John P. Gilligan, Katherine DiGuilio, Rima Dilbarova, Walker Alexander, and George P. Prendergast