Plant Science Innovation, Center for
Faculty Publications from the Center for Plant Science Innovation
James R. Alfano, Plant Pathology
Heriberto D. Cerutti , Biological Sciences
Raymond Chollet, Biochemistry
Thomas Clemente, Horticulture and Agronomy
Thomas Elthon, Horticulture and Agronomy and Biological Sciences
Michael E. Fromm, Center for Biotechnology
Steven Harris, Plant Pathology
Sally A. Mackenzie, Horticulture and Agronomy
Etsuko Moriyama, Biological Sciences
T. Jack Morris, Biological Sciences
Paul Staswick, Horticulture and Agronomy
Julie M. Stone, Biochemistry
James L. Van Etten, Plant Pathology
Donald Weeks, Center for Biological Chemistry
2023
Genome assembly of the Brassicaceae diploid Orychophragmus violaceus reveals complex whole-genome duplication and evolution of dihydroxy fatty acid metabolism, Fan Huang, Peng Chen, Xinyu Tang, Ting Zhong, Taihua Yang, Chinedu Charles Nwafor, Chao Yang, Xianhong Ge, Hong An, Zaiyun Li, Edgar B. Cahoon, and Chunyu Zhang
Sphingolipid Long-Chain Base Signaling in Compatible and Non-Compatible Plant–Pathogen Interactions in Arabidopsis, Mariana Saucedo-García, Ariadna González-Solís, Priscila Rodríguez-Mejía, Guadalupe Lozano-Rosas, Teresa de Jesús Olivera-Flores, Laura Carmona-Salazar, A. Arturo Guevara-García, Edgar B. Cahoon, and Marina Gavilanes-Ruíz
2022
Genomics and transcriptomics to protect rice (Oryza sativa L.) from abiotic stressors: -pathways to achieving zero hunger, Mushtaq Ahmad
The pho1;2a'-m1.1 allele of Phosphate1 conditions misregulation of the phosphorus starvation response in maize (Zea mays ssp. mays L.), Ana Laura Alonso-Nieves, M. Nancy Salazar-Vidal, J. Vladimir Torres-Rodríguez, Leonardo M. Pérez-Vázquez, Julio A. Massange-Sánchez, C. Stewart Gillmor, and Ruairidh J. H. Sawers
Expression of AtWRI1 and AtDGAT1 during soybean embryo development influences oil and carbohydrate metabolism, Cintia Lucía Arias, Truyen Quach, Tu Huynh, Hanh Nguyen, Ademar Moretti, Yu Shi, Ming Guo, Amira Rasoul, Kyujung Van, Leah McHale, Thomas E. Clemente, Ana Paula Alonso, and Chi Zhang
Cell-specific pathways recruited for symbiotic nodulation in the Medicago truncatula legume, Sergio Alan Cervantes-Pérez, Sandra Thibivilliers, Carole Laffont, Andrew D. Farmer, Florian Frugier, and Marc Libault
Divergent evolution of extreme production of variant plant monounsaturated fatty acids, Lu Gan, Kiyoul Park, Jin Chai, Evan M. Updike, Hyojin Kim, Adam Voshall, Sairam Behera, Xiao-Hong Yu, Yuanheng Cai, Chunyu Zhang, Mark A. Wilson, Jeffrey P. Mower, Etsuko Moriyama, Chi Zhang, Sireewan Kaewsuwan, Qun Liu, John Shanklin, and Edgar B. Cahoon
Variation in morpho‑physiological and metabolic responses to low nitrogen stress across the sorghum association panel, Marcin Grzybowski, Mackenzie Zwiener, Mackenzie Zwiener, Hongyu Jin, Nuwan K. Wijewardane, Abbas Atefi, Michael J. Naldrett, Sophie Alvarez, Yufeng Ge, and James C. Schnable
FDDM1 and FDDM2, Two SGS3-like Proteins, Function as a Complex to Affect DNA Methylation in Arabidopsis, Shengjun Li, Weilong Yang, Yunfeng Liu, Guangyong Li, Xiang Liu, Yaling Liu, James R. Alfano, Chi Zhang, and Bin Yu
Identification and Characterization of Circular RNAs in Brassica rapa in Response to Plasmodiophora brassicae, Huishan Liu, Chinedu Charles Nwafor, Yinglan Piao, Xiaonan Li, Zongxiang Zhan, and Zhongyun Piao
Association mapping across a multitude of traits collected in diverse environments in maize, Ravi V. Mural, Guangchao Sun, Marcin Grzybowski, Michael C. Tross, Hongyu Jin, Christine Smith, Linsey Newton, Carson M. Andorf, Margaret R. Woodhouse, Addie M. Thompson, Brandi Sigmon, and James C. Schnable
Genetic and Biochemical Investigation of Seed Fatty Acid Accumulation in Arabidopsis, Chinedu Charles Nwafor, Delin Li, Ping Qin, Long Li, Wei Zhang, Yuanwei Zhou, Jingjing Xu, Yongtai Yin, Jianbo Cao, Limin He, Fu Xiang, Chao Liu, Liang Guo, Yongming Zhou, Edgar B. Cahoon, and Chunyu Zhang
Insect pest management with sex pheromone precursors from engineered oilseed plants, Hong-Lei Wang, Bao-Jian Ding, Jian-Qing Dai, Tara J. Nazarenus, Rafael Borges, Agenor Mafra-Neto, Edgar B. Cahoon, Per Hofvander, Sten Stymne, and Christer Löfstedt
qTeller: a tool for comparative multi-genomic gene expression analysis, Margaret R. Woodhouse, Shatabdi Sen, David Schott, John L. Portwood II, Michael Freeling, Justin W. Walley, Carson M. Andorf, and James Schnable
2021
Dissecting the regulatory roles of ORM proteins in the sphingolipid pathway of plants, Adil Alsiyabi, Ariadna Gonzalez Solis, Edgar B. Cahoon, and Rajib Saha
Plasma Membrane Fluidity: An Environment Thermal Detector in Plants, Dora L. Cano-Ramirez, Laura Carmona-Salazar, Francisco Morales-Cedillo, Jorge Ramírez-Salcedo, Edgar B. Cahoon, and Marina Gavilanes-Ruíz
Lichens and biofilms: Common collective growth imparts similar developmental strategies, Erin C. Carr, Steven D. Harris, Joshua R. Herr, and Wayne Riekhof
Somatic variants for seed and fruit set in grapevine, Laura Costantini, Paula Moreno-Sanz, Chinedu Charles Nwafor, Silvia Lorenzi, Annarita Marrano, Fabiana Cristofolini, Elena Gottardini, Stefano Raimondi, Paola Ruffa, Ivana Gribaudo, Anna Schneider, and Maria Stella Grando
Hyperspectral reflectance-based phenotyping for quantitative genetics in crops: Progress and challenges, Marcin Grzybowski, Kuwan K. Wijewardane, Abbas Atefi, Yufeng Ge, and James C. Schnable
72-h diurnal RNA-seq analysis of fully expanded third leaves from maize, sorghum, and foxtail millet at 3-h resolution, Xianjun Lai, Claire Bendix, Yan Zhang, James Schnable, and Frank G. Harmon
Predicting transcriptional responses to cold stress across plant species, Xiaoxi Meng, Zhikai Liang, Xiuru Dai, Yang Zhang, Samira Mahboub, Daniel W. Ngu, Rebecca L. Roston, and James C. Schnable
Predicting transcriptional responses to cold stress across plant species, Xiaoxi Meng, Zhikai Liang, Xiuru Dai, Yang Zhang, Samira Mahboub, Daniel W. Ngu, Rebecca Roston, and James Schnable
Complete Mitogenomes of Two Aragoa Species and Phylogeny of Plantagineae (Plantaginaceae, Lamiales) Using Mitochondrial Genes and the Nuclear Ribosomal RNA Repeat, Jeffrey P. Mower, Lilly Hanley, Kirsten Wolff, Natalia Pabón-Mora, and Favio González
An Ancient, Light-Dependent Hydrocarbon-Forming Enzyme, Ananya Mukherjee
Compounds derived from bacteria enhance marine diatom growth, Ananya Mukherjee
Toward sustainable production of value-added bioenergy and industrial oils in oilseed and biomass feedstocks, Kiyoul Park, Sanju A. Sanjaya, Truyen Quach, and Edgar B. Cahoon
Production of tocotrienols in seeds of cotton (Gossypium hirsutum L.) enhances oxidative stability and offers nutraceutical potential, Shanmukh S. Salimath, Trevor B. Romsdahl, Anji Reddy Konda, Wei Zhang, Edgar B. Cahoon, Michael K. Dowd, Thomas C. Wedegaertner, Kater D. Hake, and Kent D. Chapman
InMut-finder: a software tool for insertion identification in mutagenesis using Nanopore long reads, Rui Song, Ziyao Wang, Hui Wang, Han Zhang, Xuemeng Wang, Hanh Nguyen, David Holding, Bin Yu, Tom Clemente, Shangang Jia, and Chi Zhang
Disruption of long-chain base hydroxylation alters growth and impacts sphingolipid synthesis in Physcomitrella patens, Abraham R. Steinberger, William Oscar Merino, Rebecca E. Cahoon, Edgar B. Cahoon, and Daniel V. Lynch
3D reconstruction identifies loci linked to variation in angle of individual sorghum leaves, Michael C. Tross, Mathieu Gaillard, Mackenzie Zwiener, Chenyong Miao, Ryleigh J. Grove, Bosheng Li, Bedrich Benes, and James C. Schnable
The Sorghum bicolor Root Exudate Sorgoleone Shapes Bacterial Communities and Delays Network Formation, Peng Wang, Yen Ning Chai, Rebecca Roston, Franck E. Dayan, and Daniel P. Schachtman
Quantitative trait loci controlling agronomic and biochemical traits in Cannabis sativa, Patrick Woods, Brian J. Campbell, Timothy J. Nicodemus, Edgar B. Cahoon, Jack L. Mullen, and John K. McKay
2020
Plant segmentation by supervised machine learning methods, Jason Adams, Yumou Qiu, Yuhang Xu, and James C. Schnable
Oxidosqualene cyclases involved in the biosynthesis of triterpenoids in Quercus suber cork, Lucas Busta, Olga Serra, Ok Tae Kim, Marisa Molinas, Irene Peré-Fossoul, Mercè Figueras, and Reinhard Jetter
IsoSeq transcriptome assembly of C3 panicoid grasses provides tools to study evolutionary change in the Panicoideae, Daniel S. Carvalho, Aime V. Nishimwe, and James C. Schnable
Dynamic Transcriptomic and Phosphoproteomic Analysis During Cell Wall Stress in Aspergillus nidulans, Cynthia Chelius, Walker Huso, Samantha Reese, Alexander Doan, Stephen Lincoln, Kelsi Lawson, Boa Tran, Raj Purohit, Trevor Glaros, Ranjan Srivastava, Steven D. Harris, and Mark R. Marten
Non-homology-based prediction of gene functions in maize (Zea mays ssp. mays), Xiuru Dai, Zheng Xu, Zhikai Liang, Xiaoyu Tu, Silin Zhong, James C. Schnable, and Pinghua Li
Non-homology-based prediction of gene functions in maize (Zea mays ssp. mays), Xiuru Dai, Zheng Xu, Zhikai Liang, Xiaoyu Tu, Silin Zhong, James Schnable, and Pinghua Li
Compounds for Increasing Lipid Synthesis and Storage, Concetta DiRusso and Nishikant Wase
Voxel carving-based 3D reconstruction of sorghum identifies genetic determinants of light interception efficiency, Mathieu Gaillard, Chenyong Miao, James C. Schnable, and Bedrich Benes
Advances in plant phenomics: From data and algorithms to biological insights, Sunil K. Kenchanmane Raju, Addie M. Thompson, and James Schnable
Leaf Angle eXtractor: A high-throughput image processing framework for leaf angle measurements in maize and sorghum, Sunil Kumar Kenchanmane Raju, Miles Adkins, Alex Enersen, Daniel Santana de Carvalho, Anthony J. Studer, Baskar Ganapathysubramanian, Patrick Schnable, and James C. Schnable
Leaf Angle eXtractor: A high-throughput image processing framework for leaf angle measurements in maize and sorghum, Sunil Kumar Kenchanmane Raju, Miles Adkins, Alex Enersen, Daniel Santana de Carvalho, Anthony J. Studer, Baskar Ganapathysubramanian, Patrick S. Schnable, and James C. Schnable
Advances in plant phenomics: From data and algorithms to biological insights, Sunil Kumar Kenchanmane Raju, Addie M. Thompson, and James Schnable
Interspecific analysis of diurnal gene regulation in panicoid grasses identifies known and novel regulatory motifs, Xianjun Lai, Claire Bendix, Lang Yan, Yang Zhang, James C. Schnable, and Frank G. Harmon
METHODS AND COMPOSITIONS FOR OBTAINING USEFUL PLANT TRAITS, Sally Mackenzie, Michael Fromm, Kamaldeep Viridi, and Yashitola Wamboldt
Semantic Segmentation of Sorghum Using Hyperspectral Data Identifies Genetic Associations, Chenyong Miao, Alejandro Pages, Zheng Xu, Eric Rodene, Jinliang Yang, and James C. Schnable
Increased Power and Accuracy of Causal Locus Identification in Time Series Genome-wide Association in Sorghum1[OPEN], Chenyong Miao, Yuhang Xu, Sanzhen Liu, Patrick S. Schnable, and James C. Schnable
Metabolic profiles of six African cultivars of cassava (Manihot esculenta Crantz) highlight bottlenecks of root yield, Toshihiro Obata, Patrick A.W. Klemens, Laise Rosado-Souza, Armin Schlereth, Andreas Gisel, Livia Stavolone, Wolfgang Zierer, Nicolas Morales, Lukas A. Mueller, Samuel C. Zeeman, Frank Ludewig, Mark State, Uwe Sonnewald, H. Ekkehard Neuhaus, and Alisdair R. Femie
A High-Throughput Phenotyping Pipeline for Image Processing and Functional Growth Curve Analysis, Ronghao Wang, Yumuo Qiu, Yuzhen Zhou, Zhikai Liang, and James Schnable
DCT4—A New Member of the Dicarboxylate Transporter Family in C4 Grasse, Sarit Weissmann, Pu Huang, Madeline A. Wiechert, Koki Furuyama, Thomas P. Brutnell, Mitsutaka Taniguchi, James C. Schnable, and Todd C. Mockler
Evolutionary and functional genomics of DNA methylation in maize domestication and improvement, Gen Xu, Jing Lyu, Qing Li, Han Liu, Dafang Wang, Mei Zhang, Nathan M. Springer, Jeffrey Ross-Ibarra, and Jinliang Yang
2019
Manipulation of β-carotene levels in tomato fruits results in increased ABA content and extended shelf-life, Gianfranco Diretto, Sarah Frusciante, Claudia Fabbri, Nicolas Schauer, Lucas Busta, Zhonghua Wang, Antonio J. Matas, Alessia Fiore, Jocelyn K. C. Rose, Alisdair R. Fernie, Reinhard Jetter, Benedetta Mattei, Jim Giovannoni, and Giovanni Giuliano
Network‐based feature selection reveals substructures of gene modules responding to salt stress in rice, Qian Du, Malachy Campbell, Huihui Yu, Kan Liu, Harkamal Walia, Qi Zhang, and Chi Zhang
FAD2 Gene Radiation and Positive Selection Contributed to Polyacetylene Metabolism Evolution in Campanulids, Tao Feng, Ya Yang, Lucas Busta, Edgar B. Cahoon, Hengchang Wang, and Shiyou Lü
FAD2 Gene Radiation and Positive Selection Contributed to Polyacetylene Metabolism Evolution in Campanulids1[OPEN], Tao Feng, Ya Yang, Lucas Busta, Edgar B. Cahoon, Hengchang Wang, and Shiyou Lü
Drought-responsive genes, late embryogenesis abundant group3 (LEA3) and vicinal oxygen chelate, function in lipid accumulation in Brassica napus and Arabidopsis mainly via enhancing photosynthetic efficiency and reducing ROS, Yu Liang, Kai Kang, Lu Gan, Shaobo Ning, Jinye Xiong, Shuyao Song, Lingzhi Xi, Senying Lai, Yongtai Yin, Jianwei Gu, Jun Xiang, Shisheng Li, Baoshan Wang, and Maoteng Li
Assessing Anthocyanin Biosynthesis in Solanaceae as a Model Pathway for Secondary Metabolism, Zou Li, Trisha Vickrey, Moira G. McNally, Shirley J. Sato, Thomas E. Clemente, and Jeffrey P. Mower
The Database of Identified Root-Specific Genes and their Promoters in Maize, Sorghum, and Soybean, Gleb Moisseyev, Divith Rajagopal, Alix Cui, Kiyoul Park, Edgar B. Cahoon, and Chi Zhang
Identification of Climate and Genetic Factors That Control Fat Content and Fatty Acid Composition of Theobroma cacao L. Beans, Guiliana M. Mustiga, Joe Morrissey, Joseph Conrad Stack, Ashley Duval, Stefan Royaert, Johannes Jansen, Carolina Bizzotto, Cristiano Villela-Dias, Linkai Mei, Edgar B. Cahoon, Ed Seguine, Jean Philippe Marelli, and Juan Carlos Motamayor
Comprehensive Analysis of Aspergillus nidulans PKA Phosphorylome Identifies a Novel Mode of CreA Regulation, Liliane F. C. Ribeiro, Cynthia Chelius, Karthik R. Boppidi, Nisha S. Naik, Simin Hossain, Jessica J. J. Ramsey, Jyothi Kumar, Lucas F. Ribeiro, Marc Ostermeier, Bao Tran, Young Ah Goo, Leandro J. de Assis, Mevlut Ulas, Ozgur Bayram, Gustavo H. Goldman, Stephen Lincoln, Ranjan Srivastava, Steven D. Harris, and Mark R. Marten
Nature-Guided Synthesis of Advanced Bio-Lubricants, Trevor Romsdahl, Asghar Shirani, Robert E. Minto, Chunyu Zhang, Edgar B. Cahoon, Kent D. Chapman, and Diana Berman
Two distinct nucleic acid binding surfaces of Cdc5 regulate development, Chao Wang, Mu Li, Guorui Li, Wensheng Zhao, Bin Yu, Junfeng Liu, Jun Yang, and You-Liang Peng
2018
Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity, Patrick P. Edger, Robert VanBuren, Marivi Colle, Thomas J. Poorten, Ching Man Wai, Chad E. Niederhuth, Elizabeth I. Alger, Shujun Ou, Charlotte B. Acharya, Jie Wang, Pete Callow, Michael R. McKain, Jinghua Shi, Chad Collier, Zhiyong Xiong, Jeffrey P. Mower, Janet P. Slovin, Timo Hytonen, Ning Jiang, Kevin L. Childs, and Steven J. Knapp
GIPC GlcNAc glycosyltransferase, Toshiki Ishikawa, Lin Fang, Emilie A. Rennie, Julien Sechet, Jingwei Yan, Beibei Jing, William Moore, Edgar B. Cahoon, Henrik V. Scheller, Maki Kawai-Yamada, and Jenny C. Mortimer
Conventional and hyperspectral time-series imaging of maize lines widely used in field trials, Zhikai Liang, Piyush Pandey, Vincent Stoerger, Yuhang Xu, Yumou Qiu, Yufeng Ge, and James C. Schnable
Development of iFOX-hunting as a functional genomic tool and demonstration of its use to identify early senescence-related genes in the polyploid Brassica napus, Juan Ling, Renjie Li, Chinedu Charles Nwafor, Junluo Cheng, Maoteng Li, Qing Xi, Jian Wu, Lu Gan, Qingyong Yang, Chao Liu, Ming Chen, Yongming Zhou, Edgar B. Cahoon, and Chunyu Zhang
MAC3A and MAC3B, Two Core Subunits of the MOS4-Associated Complex, Positively Influence miRNA biogenesis, Shengjun Li, Kan Liu, Bangjun Zhou, Mu Li, Shuxin Zhang, Lirong Zeng, Chi Zhang, and Bin Yu
MAC3A and MAC3B, Two Core Subunits of the MOS4-Associated Complex, Positively Influence miRNA biogenesis, Shengjun Li, Kan Liu, Bangjun Zhou, Mu Li, Shuxin Zhang, Lirong Zeng, Chi Zhang, and Bin Yu
SMA1, a homolog of the splicing factor Prp28, has a multifaceted role in miRNA biogenesis in Arabidopsis, Shengjun Li, Ran Xu, Aixia Li, Kan Liu, Liqing Gu, Mu Li, Hairui Zhang, Yueying Zhang, Shangshang Zhuang, Quanhui Wang, Gang Gao, Na Li, Chi Zhang, Yunhai Li, and Bin Yu
Xanthomonas oryzae pv. oryzae TALE proteins recruit OsTFIIAγ1 to compensate for the absence of OsTFIIAγ5 in bacterial blight in rice, Wenxiu Ma, Lifang Zou, Zhiyuan Ji, Xiameng Xu, Zhengyin Xu, YangYang Yang, and James R. Alfano
Molecular tools enabling pennycress (Thlaspi arvense) as a model plant and oilseed cash cover crop, Michaela McGinn, Winthrop B. Phippen, Ratan Chopra, Sunil Bansal, Brice A. Jarvis, Mary E. Phippen, Kevin M. Dorn, Maliheh Esfahanian, Tara J. Nazarenus, Edgar B. Cahoon, Timothy P. Durrett, M. David Marks, and John C. Sedbrook
The role of type III effectors from Xanthomonas axonopodis pv. manihotis in virulence and suppression of plant immunity, Cesar Augusto Medina, Paola Andrea Reyes, Cesar Augusto Trujillo, Juan Luis Gonzalez, David Alejandro Bejarano, Nathaly Andrea Montenegro, Jonathan M. Jacobs, Anna Joe, Silvia Restrepo, James R. Alfano, and Adriana Bernal
Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat, Jeffrey P. Mower, Peng-Fei Ma, Felix Grewe, Alex Taylor, Todd P. Michael, Robert VanBuren, and Yin-Long Qiu
Generation and Evaluation of Modified Opaque-2 Popcorn Suggests a Route to Quality Protein Popcorn, Ying Ren, Abou Yobi, Leandra Marshall, Ruthie Angelovici, Oscar Rodriguez, and David R. Holding
Integrating Phylogenetic and Network Approaches to Study Gene Family Evolution: The Case of the AGAMOUS Family of Floral Genes, Daniel Santana de Carvalho, James C. Schnable, and Ana Maria R. Almeida
Functional Modeling of Plant Growth Dynamics, Y. Xu, Y. Qiu, and James C. Schnable
Identification of bottlenecks in the accumulation of cyclic fatty acids in camelina seed oil, Xiao-Hong Yu, Rebecca E. Cahoon, Patrick J. Horn, Hai Shi, Richa R. Prakash, Yuanheng Cai, Maegan Hearney, Kent D. Chapman, Edgar B. Cahoon, Jorg Schwender, and John Shanklin
2017
Provitamin A biofortification of cassava enhances shelf life but reduces dry matter content of storage roots due to altered carbon partitioning into starch, Getu Beyene, Felix R. Solomon, Raj D. Chauhan, Eliana Gaitán-Solis, Narayanan Narayanan, Jackson Gehan, Dimuth Siritunga, Robin L. Stevens, John Jifon, Joyce Van Eck, Edward Linsler, Malia Gehan, Muhammad Ilyas, Martin Fregene, Richard T. Sayre, Paul Anderson, Nigel Taylor, and Edgar B. Cahoon
Complete mitochondrial genomes from the ferns Ophioglossum californicum and Psilotum nudum are highly repetitive with the largest organellar introns, Wenhu Guo, Andan Zhu, Weishu Fan, and Jeffrey P. Mower
Enhancing soybean photosynthetic CO2 assimilation using a cyanobacterial membrane protein, ictB, William T. Hay, Saadia Bihmidine, Nedim Mutlu, Khang Le Hoang, Tala Awada, Donald P. Weeks, Thomas Clemente, and Stephen P. Long
A Specialized Diacylglycerol Acyltransferase Contributes to the Extreme Medium-Chain Fatty Acid Content of Cuphea Seed Oil, Umidjon Iskandarov, Jillian E. Silva, Hae Jin Kim, Mariette Andersson, Rebecca E. Cahoon, Keithanne Mockaitis, and Edgar B. Cahoon
Expression of cyanobacterial FBP/SBPase in soybean prevents yield depression under future climate conditions, Iris H. Köhler, Ursula M. Ruiz-Vera, Andy VanLoocke, Michell L. Thomey, Thomas Clemente, Stephen P. Long, Donald R. Ort, and Carl J. Bernacchi
PLANTS WITH USEFUL TRAITS AND RELATED METHODS, Sally Ann Mackenzie and Roberto De la Rosa Santamaria
A multidomain enzyme, with glycerol-3-phosphate dehydrogenase and phosphatase activities, is involved in a chloroplastic pathway for glycerol synthesis in Chlamydomonas reinhardtii, Daniela Morales-Sánchez, Yeongho Kim, Ee Leng Terng, Laura Peterson, and Heriberto D. Cerutti
Towards the development of a sustainable soya bean-based feedstock for aquaculture, Hyunwoo Park, Steven Weier, Fareha Razvi, Pamela A. Peña, Neil A. Sims, Jennica Lowell, Cory Hungate, Karma Kissinger, Gavin Key, Paul Fraser, Jonathan Napier, Edgar B. Cahoon, and Thomas Clemente
Overexpression of SbMyb60 in Sorghum bicolor impacts both primary and secondary metabolism, Erin D. Scully, Tammy Gries, Nathan A. Palmer, Gautam Sarath, Deanna L. Funnell-Harris, Lisa Baird, Paul Twigg, Javier Seravalli, Thomas E. Clemente, and Scott E. Sattler
Differentially Regulated Orthologs in Sorghum and the Subgenomes of Maize, Yang Zhang, Daniel W. Ngu, Daniel Santana de Carvalho, Zhikai Liang, Yumou Qiu, Rebecca Roston, and James C. Schnable
Conventional and unconventional ubiquitination in plant immunity, Bangjun Zhou and Lirong Zeng
2016
Transcriptome response of cassava leaves under natural shade, Zehong Ding, Yang Zhang, Yi Xiao, Fangfang Liu, Minghui Wang, Xinguang Zhu, Peng Liu, Qi Sun, Wenquan Wang, Ming Peng, Tom Brutnell, and Pinghua Li
Limited mitogenomic degradation in response to a parasitic lifestyle in Orobanchaceae, Weishu Fan, Andan Zhu, Melisa Kozaczek, Neethu Shah, Natalia Pabón-Mora, Favio González, and Jeffrey P. Mower
A Bacterial Effector Co-opts Calmodulin to Target the Plant Microtubule Network, Ming Guo, Panya Kim, Guangyong Li, Christian Elowsky, and James R. Alfano
Ginkgo and Welwitschia mitogenomes reveal extreme contrasts in gymnosperm mitochondrial evolution, Wenhu Guo, Felix Grewe, Weishu Fan, Gregory J. Young, Volker Knoop, Jeffrey D. Palmer, and Jeffrey P. Mower
ORM Expression Alters Sphingolipid Homeostasis and Differentially Affects Ceramide Synthase Activity, Athen N. Kimberlin, Gongshe Han, Kyle D. Luttgeharm, Ming Chen, Rebecca E. Cahoon, Julie M. Stone, Jennifer E. Markham, Teresa M. Dunn, and Edgar B. Cahoon
RNA-Seq Based Analysis of Population Structure within the Maize Inbred B73, Zhikai Liang and James C. Schnable
Residues Responsible for the Selectivity of α-Conotoxins for Ac-AChBP or nAChRs, Bo Lin, Shi-Hua Xiang, and Mengsen Li
snRNA 3' End Processing by a CPSF73- Containing Complex Essential for Development in Arabidopsis, Yunfeng Liu, Shengjun Li, Yuan Chen, Athen N. Kimberlin, Edgar B. Cahoon, and Bin Yu
Screen of Non-annotated Small Secreted Proteins of Pseudomonas syringae Reveals a Virulence Factor That Inhibits Tomato Immune Proteases, Takayuki Shindo, Farnusch Kaschani, Fan Yang, Judit Kovács, Fang Tian, Jiorgos Kourelis, Tram Ngoc Hong, Tom Colby, Mohammed Shabab, Rohini Chawla, Selva Kumari, Muhammed Ilyas, Anja C. Hörger, James R. Alfano, and Renier A. L. van der Hoorn
Screen of Non-annotated Small Secreted Proteins of Pseudomonas syringae Reveals a Virulence Factor That Inhibits Tomato Immune Proteases, Takayuki Shindo, Farnusch Kaschani, Fan Yang, Judit Kovács, Fang Tian, Jiorgos Kourelis, Tram Ngoc Hong, Tom Colby, Mohammed Shabab, Rohini Chawla, Selva Kumari, Muhammed Ilyas, Anja C. Hörger, James R. Alfano, and Renier A. L. van der Hoorn
Identification of Homogentisate Dioxygenase as a Target for Vitamin E Biofortification in Oilseeds, Minviluz G. Stacey, Rebecca E. Cahoon, Hanh T. Nguyen, Yaya Cui, Shirley Sato, Cuong T. Nguyen, Nongnat Phoka, Kerry M. Clark, Yan Liang, Joe Forrester, Josef Batek, Phat Tien Do, David A. Sleper, Thomas E. Clemente, Edgar B. Cahoon, and Gary Stacey