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2007

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Complex Signatures of Selection and Gene Conversion in the Duplicated Globin Genes of House Mice, Jay F. Storz, Monica Baze, Jessica L. Waite, Federico G. Hoffmann, Juan C. Opazo, and Jack P. Hayes

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THE STUDY OF ADAPTATION AND SPECIATION IN THE GENOMIC ERA, Jay F. Storz and Hopi E. Hoekstra

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Electrochemical Stimulation of Microbial Perchlorate Reduction, J. Cameron Thrash, J. Ian Van Trump, Karrie A. Weber, Elisabeth Miller, Laurie A. Achenbach, and John D. Coates

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Identifying mechanistic models of spatial behavior using pattern-based modeling: An example from lizard home ranges, Andrew J. Tyre, Gregory D. Kerr, Brigitte Tenhumberg, and C. Michael Bull

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Cross-modal effects on learning: a seismic stimulus improves color discrimination learning in a jumping spider, Nicole D. VanderSal and Eileen Hebets

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Codon usage in twelve species of Drosophila, Saverio Vicario, Etsuko N. Moriyama, and Jeffrey R. Powell

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The Relative Importance of Different Direct Benefits in the Mate Choices of a Field Cricket, William E. Wagner Jr. and Alexandra L. Basolo

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False promises: Females spurn cheating males in a field cricket, William E. Wagner, Andrew R. Smith, and Alexandra Basolo

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Conflict between Translation Initiation and Elongation in Vertebrate Mitochondrial Genomes, Xuhua Xia, Huang Huang, Malisa Carullo, Esther Betran, and Estuko Moriyama

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Hormones in the Field: Evolutionary Endocrinology of Juvenile Hormone and Ecdysteroids in Field Populations of the Wing-Dimorphic Cricket Gryllus firmus, Anthony J. Zera, Zangwu Zhao, and Katherine Kaliseck

2006

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Abundance of and Floral Herbivory on Exotic Bull Thistle versus Native Tall Thistle in Western Tallgrass Prairie, Chad P. Andersen and Svata M. Louda

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Spatial associations of humus, nutrients and soils in mixed dipterocarp forest at Lambir, Sarawak, Malaysian Borneo, I. C. Baillie, P.S. Ashton, S.P. Chin, S.J. Davies, P.A. Palmiotto, Sabrina E. Russo, and S. Tan

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Wing Dimorphism in Aphids, Christian Braendle, Gregory K. Davis, Jennifer A. Brisson, and David L. Stern

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Can Environmental Variation Generate Positive Indirect Effects in a Model of Shared Predation?, Chad Brassil

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The pea aphid, Acyrthosiphon pisum: An emerging genomic model system for ecological, developmental, and evolutionary studies, Jennifer A. Brisson and David L. Stern

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Phylogenetic Analysis of the cardini Group of Drosophila with Respect to Changes in Pigmentation, Jennifer A. Brisson, Jason Wilder, and Hope Hollocher

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The Importance of Demographic Niches to Tree Diversity, Richard Condit, Peter Ashton, Sarayudh Bunyavejchewin, H. S. Dattaraja, Stuart Davies, Shameema Esufali, Corneille Ewango, Robin Foster, I. A.U.N. Gunatilleke, C. V.S. Gunatilleke, Pamela Hall, Kyle E. Harms, Terese Hart, Consuelo Hernandez, Stephen Hubbell, Akira Ito, Somboon Kiratiprayoon, James LaFrankie, Suzanne Loo de Lao, Jean-Remy Makana, Md. Nur Supardi Noor, Abdul Rahman Kassim, Sabrina E. Russo, Raman Sukumar, Cristián Samper, Hebbalulu S. Suresh, Sylvester Tan, Sean Thomas, Renato Valencia, Martha Vallejo, Gorky Villa, and Tommaso Zillio

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Female preference for complex/novel signals in a spider, Damian O. Elias, Eileen Hebets, and Ronald R. Hoy

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REGIONAL SEISMIC SONG DIFFERENCES IN SKY ISLAND POPULATIONS OF THE JUMPING SPIDER HABRONATTUS PUGILLIS GRISWOLD (ARANEAE, SALTICIDAE), Damian O. Elias, Eileen Hebets, Ronald R. Hoy, Wayne P. Maddison, and Andrew C. Mason

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Seismic signal production in a wolf spider: parallel versus serial multi-component signals, Damian O. Elias, Norman Lee, Eileen Hebets, and Andrew Mason

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AN EXAMINATION OF AGONISTIC INTERACTIONS IN THE WHIP SPIDER PHRYNUS MARGINEMACULATUS (ARACHNIDA, AMBLYPYGI), Kasey D. Fowler-Finn and Eileen Hebets

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The Role of Visual Ornamentation in Female Choice of a Multimodal Male Courtship Display, Eileen Hebets, K. Cuasay, and P. K. Rivlin

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Protein Binding Site Prediction Using an Empirical Scoring Function, Shide Liang, Chi Zhang, Song Liu, and Yaoqi Zhou

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Assembly of the eastern North American herpetofauna: New evidence from lizards and frogs, J. Robert Macy, James A. Schulte II, Jared L. Strasburg, Jennifer A. Brisson, Allan Larson, Natalia B. Ananjeva, Yuezhao Wang, James F. Parham, and Theodore J. Papenfuss

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Sex-Specific Expression of Alternative Transcripts in Drosophila, Lauren McIntyre, Lisa Bono, Anne Genissel, Rick Westerman, Damion Junk, Marina Telonis-Scott, Lawrence Harshman, Marta Wayne, Artyom Kopp, and Sergey V. Nuzhdin

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Plant Reproductive Allocation Predicts Herbivore Dynamics across Spatial and Temporal Scales, Tom E. X. Miller, Andrew J. Tyre, and Svata M. Louda

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Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors, Etsuko N. Moriyama, Pooja K. Strope, Stephen O. Opiyo, Zhongying Chen, and Alan M. Jones

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INVASIVE INSECT ABUNDANCE VARIES ACROSS THE BIOGEOGRAPHIC DISTRIBUTION OF A NATIVE HOST PLANT, Tatyana A. Rand and Svata M. Louda

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Spillover of Agriculturally Subsidized Predators as a Potential Threat to Native Insect Herbivores in Fragmented Landscapes, Tatyana A. Rand and Svata M. Louda

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Incorporating Animal Behavior Into Seed Dispersal Models: Implications For Seed Shadows, Sabrina E. Russo, Stephen Portnoy, and Carol K. Augspurger

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The Developmental and Molecular Basis of Allometry in Drosophila, Alexander W. Shingleton, Jennifer A. Brisson, and David L. Stern

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Phylogenetics of the Florally Diverse Andean Clade Iochrominae (Solanaceae), Stacey DeWitt Smith and David A. Baum

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ANATOMY AND PHYSIOLOGY OF GIANT NEURONS IN THE ANTENNIFORM LEG OF THE AMBLYPYGID PHRYNUS MARGINEMACULATUS, A. J. Spence and Eileen Hebets

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Evolutionary Dynamics of the Short-Nosed Fruit Bat, Cynopterus sphinx (Pteropodidae): Inferences from the Spatial Scale of Genetic and Phenotypic Differentiation, Jay F. Storz, Hari R. Bhat, Johnson Balasingh, P. Thiruchenthil Nathan, and Thomas H. Kunz

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Optimal Time Allocation in Parasitic Wasps Searching for Hosts and Food, Brigitte Tenhumberg, Gitta Siekmann, and Michael A. Keller

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Identifying landscape scale patterns from individual scale processes, Andrew J. Tyre, Brigitte Tenhumberg, and C. Michael Bull

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Environmental stress and reproduction in Drosophila melanogaster: starvation resistance, ovariole numbers and early age egg production, Marta L. Wayne, Usha Soundararajan, and Lawrence G. Harshman

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Microorganisms pumping iron: Anaerobic microbial iron oxidation and reduction, Karrie A. Weber, Laurie A. Achenbach, and John D. Coates

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Anaerobic Nitrate-Dependent Iron(II) Bio-Oxidation by a Novel Lithoautotrophic Betaproteobacterium, Strain 2002, Karrie A. Weber, Jarrod Pollock, Kimberly A. Cole, Susan M. O'Connor, Laurie A. Achenbach, and John D. Coates

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Anaerobic redox cycling of iron by freshwater sediment microorganisms, Karrie A. Weber, Matilde M. Urrutia, Perry F. Churchill, Ravi K. Kukkadapu, and Eric E. Roden

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Evolutionary genetics of juvenile hormone and ecdysteroid regulation in Gryllus: A case study in the microevolution of endocrine regulation, Anthony J. Zera

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Intermediary Metabolism and Life-History Trade-Offs: Differential Metabolism of Amino Acids Underlies the Dispersal-Reproduction Trade-Off in a Wing-Polymorphic Cricket, Anthony J. Zera and Zhangwu Zhao

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Biochemical basis of specialization for dispersal vs. reproduction in a wing-polymorphic cricket: Morph-specific metabolism of amino acids, Zhangwu Zhao and Anthony J. Zera

2005

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Methylation patterns of histone H3 Lys 4, Lys 9 and Lys 27 in transcriptionally active and inactive Arabidopsis genes and in atx1 mutants, Raul Alvarez-Venegas and Zoya Avramova

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The Tree-Thinking Challenge, David A. Baum, Stacey DeWitt Smith, and Samuel S.S. Donovan

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Abdominal Pigmentation Variation in Drosophila polymorpha: Geographic Variation in the Trait, and Underlying Phylogeography, Jennifer A. Brisson, Daniela Cristina De Toni, Ian Duncan, and Alan R. Templeton

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Terrestrial Behavior of Ateles spp., Christina J. Campbell, Filippo Aureli, Colin A. Chapman, Gabriel Ramos-Fernández, Kim Matthews, Sabrina E. Russo, Scott Suarez, and Laura Vick

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First record of Drosophila parthenogenetica and D. neomorpha, cardini group, Heed, 1962 (Drosophila, Drosophilidae), in Brazil, Daniela Cristina De Toni, Jennifer A. Brisson, Paulo R. P. Hofmann, Marlucia Martins, and Hope Hollocher

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Seismic signals are crucial for male mating success in a visual specialist jumping spider (Araneae: Salticidae), Damian O. Elias, Eileen Hebets, Ronald R. Hoy, and Andrew C. Mason

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The Effects of Livestock on California Ground Squirrels (Spermophilus beecheyii), Jeffrey S. Fehmi, Sabrina E. Russo, and James W. Bartolome

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Radiative Neutron β-Decay in Effective Field Theory, Susan Gardner, Véronique Bernard, and Chi Zhang

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Microsatellite DNA Analysis Shows that Greater Sage Grouse Leks Are Not Kin Groups, Robert M. Gibson, Debra Pires, Kathleen S. Delaney, and Robert K. Wayne

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Attention-altering signal interactions in the multimodal courtship display of the wolf spider Schizocosa uetzi, Eileen Hebets

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Xenophilic mating preferences among populations of the jumping spider Habronattus pugillis Griswold, Eileen Hebets and Wayne P. Maddison

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Complex signal function: Developing a framework of testable hypotheses, Eileen Hebets and Daniel R. Papaj

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A Nontechnical Introduction to "Biocontrol as Usual": Review of Ann Hajek, Natural Enemies, Svata M. Louda

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EVALUATION OF ECOLOGICAL RISK TO POPULATIONS OF A THREATENED PLANT FROM AN INVASIVE BIOCONTROL INSECT, Svata M. Louda, Tatyana A. Rand, Amy E. Arnett, A. S. McClay, K. Shea, and A. Kathryn McEachern

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Assessment of ecological risks in weed biocontrol: Input from retrospective ecological analyses, Svata M. Louda, Tatyana A. Rand, F. Leland Russell, and Amy E. Arnett

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Rapid Senescence in Pacific Salmon, Yolanda E. Morbey, Chad Brassil, and Andrew P. Hendry

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Demographic and Evolutionary Impacts of Native and Invasive Insect Herbivores on Cirsium canescens, Karen E. Rose, Svata M. Louda, and Mark Rees

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Indirect interaction between two native thistles mediated by an invasive exotic floral herbivore, F. Leland Russell and Svata M. Louda

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Linking seed fate to natural dispersal patterns: factors affecting predation and scatter-hoarding of Virola calophylla seeds in Peru, Sabrina E. Russo

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A Multi-Forest Comparison of Dietary Preferences and Seed Dispersal by Ateles spp., Sabrina E. Russo, Christina J. Campbell, J. Lawrence Dew, Pablo R. Stevenson, and Scott A. Suarez

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Soil-Related Performance Variation and Distributions of Tree Species in a Bornean Rain Forest, Sabrina E. Russo, Stuart J. Davies, David A. King, and Sylvester Tan

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Community Analysis of a Mercury Hot Spring Supports Occurrence of Domain-Specific Forms of Mercuric Reductase, Jessica Simbahan, Elizabeth Kurth, James Schelert, Amanda Dillman, Estuko Moriyama, Stevan Jovanovich, and Paul H. Blum

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Homologous and Heterologous Reconstitution of Golgi to Chloroplast Transport and Protein Import into the Complex Chloroplasts of Euglena, Silvia Sláviková, Rostislav Vacula, Zhiwei Fang, Tomoko Ehara, Tetsuaki Osafune, and Steven D. Schwartzbach

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Nonrandom dispersal and local adaptation, Jay F. Storz

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Using genome scans of DNA polymorphism to infer adaptive population divergence, Jay F. Storz

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Intermediary Metabolism and Life History Trade-offs: Lipid Metabolism in Lines of the Wing-polymorphic Cricket, Gryllus firmus, Selected for Flight Capability vs. Early Age Reproduction, Anthony J. Zera

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Web-based toolkits for topology prediction of transmembrane helical proteins, fold recognition, structure and binding scoring, folding-kinetics analysis and comparative analysis of domain combinations, Hongyi Zhou, Chi Zhang, Song Liu, and Yaoqi Zhou

2004

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Long-Range Visibility of Greater Sage Grouse Leks: A GIS-Based Analysis, Andrea S. Aspbury and Robert M. Gibson

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Phylogenetic Relationships of Malvatheca (Bombacoideae and Malvoideae; Malvaceae sensu lato) as Inferred from Plastid DNA Sequences, David A. Baum, Stacey DeWitt Smith, Alan Yen, William S. Alverson, Reto Nyffeler, Barbara A. Whitlock, and Rebecca L. Oldham

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How Predation Risk Affects the Temporal Dynamics of Avian Leks: Greater Sage Grouse versus Golden Eagles, Adam R. Boyko, Robert M. Gibson, and Jeffrey R. Lucas

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How Predation Risk Affects the Temporal Dynamics of Avian Leks: Greater Sage Grouse versus Golden Eagles, Adam R. Boyko, Robert M. Gibson, and Jeffrey R. Lucas

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Population Genetics of the Developmental Gene optomotor-blind (omb) in Drosophila polymorpha: Evidence for a Role in Abdominal Pigmentation Variation, Jennifer A. Brisson, Alan R. Templeton, and Ian Duncan

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Spatial Heterogeneity, Not Visitation Bias, Dominates Variation in Herbivory: Comment & Reply, James F. Cahill, Brenda B. Casper, David S. Hik, Svata M. Louda, Anne M. Parkhurst, Kate L. Bradley, Elisabeth S. Bakker, Johannes M. N. Knops, Ellen I. Damschen, and Lauren M. Young

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Host–Symbiont Stability and Fast Evolutionary Rates in an Ant–Bacterium Association: Cospeciation of Camponotus Species and Their Endosymbionts, Candidatus Blochmannia, Patrick H. Degnan, Adam B. Lazarus, Chad D. Brock, and Jennifer J. Wernegreen

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Kangaroo management options IN THE MURRAY-DARLING BASIN, Ron Hacker, Steve McLeod, John Druhan, Brigitte Tenhumberg, and Udai Pradhan

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Book Review: Los Mamíferos de la Provincia de Jujuy, Argentina, Federico G. Hoffmann

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Book Review: Tangled Trees: Phylogeny, Cospeciation, and Coevolution, Federico G. Hoffmann

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Isolation and characterization of 11 polymorphic microsatellite loci in collared lizards (Crotaphytus collaris), Delbert W. Hutchison, Jared L. Strasburg, Jennifer A. Brisson, and Shawn Cummings

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Impact of Intraspecific Polyploidy in Andropogon gerardii (Poaceae) Populations, Kathleen H. Keeler

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Aspects of the ecology of a distinct population of Xenosaurus platyceps from Querétaro, México, Julio A. Lemos-Espinal, Geoffrey R. Smith, and Royce E. Ballinger

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Estimation of genetically effective breeding numbers using a rejection algorithm approach, Uma Ramakrishnan, Jay F. Storz, Barbara L. Taylor, and Russell Lande

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Exotic Weed Invasion Increases the Susceptibility of Native Plants to Attack by a Biocontrol Herbivore, Tatyana A. Rand and Svata M. Louda

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Aggregated Seed Dispersal by Spider Monkeys Limits Recruitment to Clumped Patterns in Virola calophylla, Sabrina E. Russo and Carol K. Augsperger

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The Sweet Tooth of Adult Parasitoid Cotesia rubecula: Ignoring Hosts for Nectar?, Gitta Siekmann, Michael A. Keller, and Brigitte Tenhumberg

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Genetic Discontinuities among Populations of Cleistes (Orchidaceae, Vanilloideae) in North America, Stacey DeWitt Smith, Robyn S. Cowan, Katharine B. Gregg, Mark W. Chase, Nigel Maxted, and Michael F. Fay

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Natural Selection Drives Altitudinal Divergence at the Albumin Locus in Deer Mice, Peromyscus Maniculatus, Jay F. Storz and Jean M. Dubach

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Genome Scans of DNA Variability in Humans Reveal Evidence for Selective Sweeps Outside of Africa, Jay F. Storz, Bret A. Payseur, and Michael W. Nachman

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Predicting predation efficiency of biocontrol agents: linking behavior of individuals and population dynamics, Brigitte Tenhumberg

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DO HARVEST REFUGES BUFFER KANGAROOS AGAINST EVOLUTIONARY RESPONSES TO SELECTIVE HARVESTING?, Brigitte Tenhumberg, Andrew J. Tyre, Anthony R. Pople, and Hugh P. Possingham

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Linking Wild and Captive Populations to Maximize Species Persistence: Optimal Translocation Strategies, Brigitte Tenhumberg, Andrew J. Tyre, Katriona Shea, and Hugh P. Possingham

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The role of local spatial heterogeneity in the maintenance of parapatric boundaries: agent based models of competition between two parasitic ticks, Andrew J. Tyre, Brigitte Tenhumberg, and C. Michael Bull

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Effect of a Juvenile Hormone Analogue on Lipid Metabolism in a Wing-Polymorphic Cricket: Implications for the Endocrine-Biochemical Bases of Life-History Trade-Offs, Anthony J. Zera and Zhangwu Zhao

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The Dependence of All-Atom Statistical Potentials on Structural Training Database, Chi Zhang, Song Liu, Hongyi Zhou, and Yaoqi Zhou

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A morph-specific daily cycle in the rate of JH biosynthesis underlies a morph-specific daily cycle in the hemolymph JH titer in a wing-polymorphic cricket, Zhangwu Zhao and Anthony J. Zera

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The hemolymph JH titer exhibits a large-amplitude, morph-dependent, diurnal cycle in the wing-polymorphic cricket, Gryllus firmus, Zhangwu Zhao and Anthony J. Zera

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Toward a physical energy function for intra- and inter-protein interactions by combining structural knowledge with physical principles, Yaoqi Zhou, Hongyi Zhou, Chi Zhang, and Song Liu

2003

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Food Supplements Modulate Changes in Leucocyte Numbers in Breeding Male Ground Squirrels, Gwendolyn C. Bachman