Statistics, Department of

The R Journal

A peer-reviewed, open-access publication of the R Foundation for Statistical Computing. The UNL Digital Commons is a mirror site for the journal and does not administer its publication.

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2015

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Open-Channel Computation with R, Michael C. Koohafkan and Bassam A. Younis

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Correspondence Analysis on Generalised Aggregated Lexical Tables (CA-GALT) in the FactoMineR Package, Belchin Kostov, Mónica Bécue-Bertaut, and François Husson

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sparkTable: Generating Graphical Tables for Websites and Documents with R, Alexander Kowarik, Bernhard Meindl, and Matthias Templ

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BSGS: Bayesian Sparse Group Selection, Kuo-Jung Lee and Ray-Bing Chen

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zoib: An R Package for Bayesian Inference for Beta Regression and Zero/One Inflated Beta Regression, Fang Liu and Yunchuan Kong

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sae: An R Package for Small Area Estimation, Isabel Molina and Yolanda Marhuenda

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Generalized Hermite Distribution Modelling with the R Package hermite, David Moriña, Manuel Higueras, Pedro Puig, and María Oliveira

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The gridGraphics Package, Paul Murrell

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fslr: Connecting the FSL Software with R, John Muschelli, Elizabeth Sweeney, Martin Lindquist, and Ciprian Crainiceanu

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apc: An R Package for Age-Period-Cohort Analysis, Bent Nielsen

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abctools: An R Package for Tuning Approximate Bayesian Computation Analyses, Matthew A. Nunes and Dennis Prangle

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Implementing Persistent O(1) Stacks and Queues in R, Shawn T. O'Neil

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Peptides: A Package for Data Mining of Antimicrobial Peptides, Daniel Osorio, Paola Rondón-Villarreal, and Rodrigo Torres

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The R Consortium and the R Foundation, Martyn Plummer

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showtext: Using System Fonts in R Graphics, Yixuan Qiu

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Changes in R, R Core Team

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R as an Environment for Reproducible Analysis of DNA Amplification Experiments, Stefan Rödiger, Michał Burdukiewicz, Konstantin Blagodatskikh, Michael Jahn, and Peter Schierack

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Code Profiling in R: A Review of Existing Methods and an Introduction to Package GUIProfiler, Angel Rubio and Fernando de Villar

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ALTopt: An R Package for Optimal Experimental Design of Accelerated Life Testing, Kangwon Seo and Rong Pan

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News from the Bioconductor Project, The Bioconductor Team

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Changes in R, The R Core Team

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The R Journal (December 2015) 7(2): Complete Issue, The R Foundation

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The R Journal (June 2015) 7(1): Complete Issue, The R Foundation

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Conference Report: useR! 2015, Torben Tvedebrink

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PracTools: Computations for Design of Finite Population Samples, Richard Valliant, Jill A. Dever, and Frauke Kreuter

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An R Package for the Panel Approach Method for Program Evaluation: pampe, Ainhoa Vega-Bayo

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ClustVarLV: An R Package for the Clustering of Variables Around Latent Variables, Evelyne Vigneau, Mingkun Chen, and El Mostafa Qannari

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SRCS: Statistical Ranking Color Scheme for Visualizing Parameterized Multiple Pairwise Comparisons with R, Pablo J. Villacorta and José A. Sáez

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mtk: A General-Purpose and Extensible R Environment for Uncertainty and Sensitivity Analyses of Numerical Experiments, Juhui Wang, Robert Faivre, Hervé Richard, and Hervé Monod

2014

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Applying spartan to Understand Parameter Uncertainty in Simulations, Kieran Alden, Mark Read, Paul S. Andrews, Jon Timmis, and Mark Coles

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Conference Report Polish Academic R User Meeting, Maciej Beręsewicz, Alicja Szabelska, Joanna Zyprych-Walczak, and Łukasz Wawrowski

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News from the Bioconductor Project, Bioconductor Team

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oligoMask: A Framework for Assessing and Removing the Effect of Genetic Variants on Microarray Probes, Daniel Bottomly, Beth Wilmot, and Shannon K. McWeeney

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sgof: An R Package for Multiple Testing Problems, Irene Castro-Conde and Jacob de Uña-Álvarez

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SMR: An R Package for Computing the Externally Studentized Normal Midrange Distribution, Ben Dêivide, Oliveira Batista, and Daniel Furtado Ferreira

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Conference Report: R in Insurance 2014, Markus Gesmann and Andreas Tsanakas

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phaseR: An R Package for Phase Plane Analysis of Autonomous ODE Systems, Michael J. Grayling

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investr: An R Package for Inverse Estimation, Brandon M. Greenwell and Christine M. Schubert Kabban

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Stratified Weibull Regression Model for Interval-Censored Data, Xiangdong Gu, David Shapiro, Michael D. Hughes, and Raji Balasubramanian

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Farewell's Linear Increments Model for Missing Data: The FLIM package, Rune Hoff, JOn Michael Gran, and Daniel Farewell

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R Foundation News, Kurt Hornik

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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ngspatial: A Package for Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data, John Hughes

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Rankcluster: An R Package for Clustering Multivariate Partial Rankings, Julien Jacques, Quentin Grimonprez, and Christophe Biernacki

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Addendum to “Statistical Software from a Blind Person's Perspective'”, A. Johnathan, R. Godfrey, and Robert Erhardt

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RStorm: Developing and Testing Streaming Algorithms in R, Maurits Kaptein

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MVN: An R Package for Assessing Multivariate Normality, Selcuk Korkmaz, Dincer Goksuluk, and Gokmen Zararsiz

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MRCV: A Package for Analyzing Categorical Variables with Multiple Response Options, Natalie A. Koziol and Christopher R. Bilder

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Archiving Reproducible Research with R and Dataverse, Thomas J. Leeper

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gset: An R Package for Exact Sequential Test of Equivalence Hypothesis Based on Bivariate Non-Central t-Statistics, Fang Liu

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sgr: A Package for Simulating Conditional Fake Ordinal Data, Luigi Lombardi and Massimiliano Pastore

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ROSE: a Package for Binary Imbalanced Learning, Nicola Lunardon, Giovanna Menardi, and Nicola Torelli

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R Foundation News, Martin Mächler and Kurt Hornik

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Web Technologies Task View, Patrick Mair and Scott Chamberlain

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The gridSVG Package, Paul Murrell and Simon Potter

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brainR: Interactive 3 and 4D Images of High Resolution Neuroimage Data, John Muscelli, Elizabeth Sweeney, and Ciprian Crainiceanu

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A Multiscale Test of Spatial Stationarity for Textured Images in R, Matthew A. Nunes, Sarah L. Taylor, and Idris A. Eckley

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Automatic Conversion of Tables to LongForm Dataframes, Jimmy Oh

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PivotalR: A Package for Machine Learning on Big Data, Hai Qian

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bshazard: A Flexible Tool for Nonparametric Smoothing of the Hazard Function, Paola Rebora, Agus Salim, and Marie Reilly

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Editorial, Deepayan Sarkar

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Editorial, Deepayan Sarkar

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Taming PITCHf/x Data with XML2R and pitchRx, Carson Sievert

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rotations: An R Package for SO(3) Data, Bryan Stanfill, Heike Hofmann, and Ulrike Genschel

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Coordinate-Based Meta-Analysis of fMRI Studies with R, Andrea Stocco

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News from the Bioconductor Project, The Bioconductor Team

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Changes in R, The R Core Team

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Changes in R, The R Core Team

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The R Journal (December 2014) 6(2): Complete Issue, The R Foundation

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The R Journal (June 2014) 6(1): Complete Issue, The R Foundation

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The stringdist Package for Approximate String Matching, Mark P.J. van der Loo

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Flexible R Functions for Processing Accelerometer Data, with Emphasis on NHANES 2003–2006, Dane R. Van Domelen and W. Stephen Pittard

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The RWiener Package: an R Package Providing Distribution Functions for the Wiener Diffusion Model, Dominik Wabersich and Joachim Vandekerckhove

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qmethod: A Package to Explore Human Perspectives Using Q Methodology, Aiora Zabala

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Prinsimp, Jonathan Zhang, Nancy Heckman, Davor Cubranic, Joel G. Kingsolver, Travis Gaydos, and J.S. Marron

2013

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factorplot: Improving Presentation of Simple Contrasts in Generalized Linear Models, David A. Armstrong II

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rlme: An R Package for Rank-Based Estimation and Prediction in Random Effects Nested Models, Yusuf K. Bilgic and Herbert Susmann

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News from the Bioconductor Project, Bioconductor Team

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News from the Bioconductor Project, Bioconductor Team

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Dynamic Parallelization of R Functions, Stefan Böhringer

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RcmdrPlugin.temis, a Graphical Integrated Text Mining Solution in R, Milan Bouchet-Valat and Gilles Bastin

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An Introduction to the EcoTroph R Package: Analyzing Aquatic Ecosystem Trophic Networks, Mathieu Colléter, Jérôme Guitton, and Didier Gascuel

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stellaR: A Package to Manage Stellar Evolution Tracks and Isochrones, Matteo Dell’Omodarme and Giada Valle

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The R in Robotics, André Dietrich, Sebastian Zug, and Jörg Kaiser

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osmar: OpenStreetMap and R, Manuel J. Eugster and Thomas Schlesinger

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beadarrayFilter: An R Package to Filter Beads, Anyiawung Chiara Forcheh, Geert Verbeke, Adetayo Kasim, Dan Lin, Ziv Shkedy, Willem Talloen, Hinrich W.H. Göhlmann, and Lieven Clement

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Hypothesis Tests for Multivariate Linear Models Using the car Package, John Fox, Michael Friendly, and Sanford Weisberg

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lfe: Linear Group Fixed Effects, Simen Gaure

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Statistical Software from a Blind Person's Perspective, A. Jonathan R. Godfrey

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On Sampling from the Multivariate t Distribution, Marius Hofert

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R Foundation News, Kurt Hornik

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R Foundation News, Kurt Hornik

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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RTextTools: A Supervised Learning Package for Text Classification, Timothy P. Jurka, Loren Collingwood, Amber E. Boydstun, Emiliano Grossman, and Wouter van Atteveldt

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mpoly: Multivariate Polynomials in R, David Kahle

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ggmap: Spatial Visualization with ggplot2, David Kahle and Hadley Wickham

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Multiple Factor Analysis for Contingency Tables in the FactoMineR Package, Belchin Kostov, Mónica Bécue-Bertaut, and François Husson

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Translating Probability Density Functions: From R to BUGS and Back Again, David S. LeBauer, Michael C. Dietze, and Benjamin M. Bolker