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Statistics, Department of

The R Journal




A peer-reviewed, open-access publication of the R Foundation for Statistical Computing.

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2014

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Applying spartan to Understand Parameter Uncertainty in Simulations, Kieran Alden, Mark Read, Paul S. Andrews, Jon Timmis, and Mark Coles

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Conference Report Polish Academic R User Meeting, Maciej Beręsewicz, Alicja Szabelska, Joanna Zyprych-Walczak, and Łukasz Wawrowski

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News from the Bioconductor Project, Bioconductor Team

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oligoMask: A Framework for Assessing and Removing the Effect of Genetic Variants on Microarray Probes, Daniel Bottomly, Beth Wilmot, and Shannon K. McWeeney

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sgof: An R Package for Multiple Testing Problems, Irene Castro-Conde and Jacob de Uña-Álvarez

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SMR: An R Package for Computing the Externally Studentized Normal Midrange Distribution, Ben Dêivide, Oliveira Batista, and Daniel Furtado Ferreira

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Conference Report: R in Insurance 2014, Markus Gesmann and Andreas Tsanakas

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phaseR: An R Package for Phase Plane Analysis of Autonomous ODE Systems, Michael J. Grayling

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investr: An R Package for Inverse Estimation, Brandon M. Greenwell and Christine M. Schubert Kabban

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Stratified Weibull Regression Model for Interval-Censored Data, Xiangdong Gu, David Shapiro, Michael D. Hughes, and Raji Balasubramanian

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Farewell's Linear Increments Model for Missing Data: The FLIM package, Rune Hoff, JOn Michael Gran, and Daniel Farewell

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R Foundation News, Kurt Hornik

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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ngspatial: A Package for Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data, John Hughes

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Rankcluster: An R Package for Clustering Multivariate Partial Rankings, Julien Jacques, Quentin Grimonprez, and Christophe Biernacki

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Addendum to “Statistical Software from a Blind Person's Perspective'”, A. Johnathan, R. Godfrey, and Robert Erhardt

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RStorm: Developing and Testing Streaming Algorithms in R, Maurits Kaptein

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MVN: An R Package for Assessing Multivariate Normality, Selcuk Korkmaz, Dincer Goksuluk, and Gokmen Zararsiz

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MRCV: A Package for Analyzing Categorical Variables with Multiple Response Options, Natalie A. Koziol and Christopher R. Bilder

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Archiving Reproducible Research with R and Dataverse, Thomas J. Leeper

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gset: An R Package for Exact Sequential Test of Equivalence Hypothesis Based on Bivariate Non-Central t-Statistics, Fang Liu

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sgr: A Package for Simulating Conditional Fake Ordinal Data, Luigi Lombardi and Massimiliano Pastore

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ROSE: a Package for Binary Imbalanced Learning, Nicola Lunardon, Giovanna Menardi, and Nicola Torelli

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R Foundation News, Martin Mächler and Kurt Hornik

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Web Technologies Task View, Patrick Mair and Scott Chamberlain

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The gridSVG Package, Paul Murrell and Simon Potter

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brainR: Interactive 3 and 4D Images of High Resolution Neuroimage Data, John Muscelli, Elizabeth Sweeney, and Ciprian Crainiceanu

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A Multiscale Test of Spatial Stationarity for Textured Images in R, Matthew A. Nunes, Sarah L. Taylor, and Idris A. Eckley

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Automatic Conversion of Tables to LongForm Dataframes, Jimmy Oh

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PivotalR: A Package for Machine Learning on Big Data, Hai Qian

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bshazard: A Flexible Tool for Nonparametric Smoothing of the Hazard Function, Paola Rebora, Agus Salim, and Marie Reilly

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Editorial, Deepayan Sarkar

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Editorial, Deepayan Sarkar

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Taming PITCHf/x Data with XML2R and pitchRx, Carson Sievert

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rotations: An R Package for SO(3) Data, Bryan Stanfill, Heike Hofmann, and Ulrike Genschel

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Coordinate-Based Meta-Analysis of fMRI Studies with R, Andrea Stocco

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News from the Bioconductor Project, The Bioconductor Team

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Changes in R, The R Core Team

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Changes in R, The R Core Team

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The R Journal (December 2014) 6(2): Complete Issue, The R Foundation

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The R Journal (June 2014) 6(1): Complete Issue, The R Foundation

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The stringdist Package for Approximate String Matching, Mark P.J. van der Loo

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Flexible R Functions for Processing Accelerometer Data, with Emphasis on NHANES 2003–2006, Dane R. Van Domelen and W. Stephen Pittard

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The RWiener Package: an R Package Providing Distribution Functions for the Wiener Diffusion Model, Dominik Wabersich and Joachim Vandekerckhove

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qmethod: A Package to Explore Human Perspectives Using Q Methodology, Aiora Zabala

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Prinsimp, Jonathan Zhang, Nancy Heckman, Davor Cubranic, Joel G. Kingsolver, Travis Gaydos, and J.S. Marron

2013

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factorplot: Improving Presentation of Simple Contrasts in Generalized Linear Models, David A. Armstrong II

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rlme: An R Package for Rank-Based Estimation and Prediction in Random Effects Nested Models, Yusuf K. Bilgic and Herbert Susmann

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News from the Bioconductor Project, Bioconductor Team

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News from the Bioconductor Project, Bioconductor Team

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Dynamic Parallelization of R Functions, Stefan Böhringer

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RcmdrPlugin.temis, a Graphical Integrated Text Mining Solution in R, Milan Bouchet-Valat and Gilles Bastin

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An Introduction to the EcoTroph R Package: Analyzing Aquatic Ecosystem Trophic Networks, Mathieu Colléter, Jérôme Guitton, and Didier Gascuel

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stellaR: A Package to Manage Stellar Evolution Tracks and Isochrones, Matteo Dell’Omodarme and Giada Valle

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The R in Robotics, André Dietrich, Sebastian Zug, and Jörg Kaiser

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osmar: OpenStreetMap and R, Manuel J. Eugster and Thomas Schlesinger

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beadarrayFilter: An R Package to Filter Beads, Anyiawung Chiara Forcheh, Geert Verbeke, Adetayo Kasim, Dan Lin, Ziv Shkedy, Willem Talloen, Hinrich W.H. Göhlmann, and Lieven Clement

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Hypothesis Tests for Multivariate Linear Models Using the car Package, John Fox, Michael Friendly, and Sanford Weisberg

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lfe: Linear Group Fixed Effects, Simen Gaure

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Statistical Software from a Blind Person's Perspective, A. Jonathan R. Godfrey

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On Sampling from the Multivariate t Distribution, Marius Hofert

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R Foundation News, Kurt Hornik

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R Foundation News, Kurt Hornik

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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RTextTools: A Supervised Learning Package for Text Classification, Timothy P. Jurka, Loren Collingwood, Amber E. Boydstun, Emiliano Grossman, and Wouter van Atteveldt

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mpoly: Multivariate Polynomials in R, David Kahle

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ggmap: Spatial Visualization with ggplot2, David Kahle and Hadley Wickham

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Multiple Factor Analysis for Contingency Tables in the FactoMineR Package, Belchin Kostov, Mónica Bécue-Bertaut, and François Husson

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Translating Probability Density Functions: From R to BUGS and Back Again, David S. LeBauer, Michael C. Dietze, and Benjamin M. Bolker

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Conference Review: The 6th Chinese R Conference, Jing Leng and Jingjing Guan

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Performance Attribution for Equity Portfolios, Yang Lu and David Kane

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Fast Pure R Implementation of GEE: Application of the Matrix Package, Lee S. McDaniel, Nicholas C. Henderson, and Paul J. Rathouz

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RNetCDF: A Package for Reading and Writing NetCDF Datasets, Pavel Michna and Milton Woods

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Changes to grid for R 3.0.0, Paul Murrell

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CompLognormal: An R Package for Composite Lognormal Distributions, S. Nadarajah and S. A.A. Bakar

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Possible Directions for Improving Dependency Versioning in R, Jeroen Ooms

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Surface Melting Curve Analysis with R, Stefan Rödiger, Alexander Böhm, and Ingolf Schimke

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spMC: Modelling Spatial Random Fields with Continuous Lag Markov Chains, Luca Sartore

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Temporal Disaggregation of Time Series, Christoph Sax and Peter Steiner

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ftsa: An R Package for Analyzing Functional Time Series, Han Lin Shang

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ExactCIdiff: An R Package for Computing Exact Confidence Intervals for the Difference of Two Proportions, Guogen Shan and Weizhen Wang

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Conference Report: Deuxièmes Rencontres R, Aurelie Siberchicot and Stephane Dray

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betategarch: Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models, Genaro Sucarrat

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Changes in R, The R Core Team

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Changes in R, The R Core Team

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The R Journal (December 2013) 5(2): Complete Issue, The R Foundation

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The R Journal (June 2013) 5(1): Complete Issue, The R Foundation

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QCA: A Package for Qualitative Comparative Analysis, Alrik Thiem and Adrian Duşa

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Conference Report: R/Finance 2013, Joshua Ulrich

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Let Graphics Tell the Story: Datasets in R, Antony Unwin, Heike Hofmann, and Dianne Cook

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The R User Conference 2013, UseR 2013 Organising Committee

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Editorial, Hadley Wickham

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Editorial, Hadley Wickham

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Estimating Spatial Probit Models in R, Stefan Wilhelm and Miguel Godinho de Matos

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Generalized Simulated Annealing for Global Optimization: The GenSA Package, Yang Xiang, Sylvain Gubian, Brain Suomela, and Julia Hoeng

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PIN: Measuring Asymmetric Information in Financial Markets with R, Paolo Zagaglia

2012

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Foreign Library Interface, Daniel Adler

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xgrid and R: Parallel Distributed Processing Using Heterogeneous Groups of Apple Computers, Sarah C. Anoke, Yuting Zhao, Rafael Jaeger, and Nicholas J. Horton