Statistics, Department of

The R Journal

A peer-reviewed, open-access publication of the R Foundation for Statistical Computing. The UNL Digital Commons is a mirror site for the journal and does not administer its publication.

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2017

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Conference Report: useR!2017, Tobias Verbeke

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The welchADF Package for Robust Hypothesis Testing in Unbalanced Multivariate Mixed Models with Heteroscedastic and Non-normal Data, Pablo J. Villacorta

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carx: An R Package to Estimate Censored Autoregressive Time Series with Exogenous Covariates, Chao Wang and Kung-Sik Chan

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Market Area Analysis for Retail and Service Locations with MCI, Thomas Wieland

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rentrez: An R package for the NCBI eUtils API, David J. Winter

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ManlyMix: An R Package for Manly Mixture Modeling, Xuwen Zhu and Volodymyr Melnykov

2016

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Design of the TRONCO BioConductor Package for TRanslational ONCOlogy, Marco Antoniotti, Giulio Caravagna, Luca De Sano, Alex Graudenzi, Giancarlo Mauri, Bud Mishra, and Daniele Ramazzotti

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keyplayer: An R Package for Locating Key Players in Social Networks, Weihua An and Yu-Hsin Liu

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Two-Tier Latent Class IRT Models in R, Silvia Bacci and Francesco Bartolucci

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metaplus: An R Package for the Analysis of Robust Meta-Analysis and Meta-Regression, Ken J. Beath

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SWMPr: An R Package for Retrieving, Organizing, and Analyzing Environmental Data for Estuaries, Marcus W. Beck

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News from the Bioconductor Project, Bioconductor Core Team

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News from the Bioconductor Project, Bioconductor Team

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Conditional Fractional Gaussian Fields with the Package FieldSim, Alexandre Brouste, Jacques Istas, and Sophie Lambert-Lacroix

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Maps, Coordinate Reference Systems and Visualising Geographic Data with mapmisc, Patrick E. Brown

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scmamp: Statistical Comparison of Multiple Algorithms in Multiple Problems, Borja Calvo and Guzmán Santafé

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hdm: High-Dimensional Metrics, Victor Chernozhukov, Chris Hansen, and Martin Spindler

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eiCompare: Comparing Ecological Inference Estimates across EI and EI:RC, Loren Collingwood, Kassra Oskooii, Sergio Garcia-Rios, and Matt Barreto

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GMDH: An R Package for Short Term Forecasting via GMDH-Type Neural Network Algorithms, Osman Dag and Ceylan Yozgatligil

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rTableICC: An R Package for Random Generation of 22K and RC Contingency Tables, Haydar Demirhan

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CryptRndTest: An R Package for Testing the Cryptographic Randomness, Haydar Demirhan and Nihan Bitirim

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Calculating Biological Module Enrichment or Depletion and Visualizing Data on Large-scale Molecular Maps with ACSNMineR and RNaviCell Packages, Paul Deveau, Emmanuel Barillot, Valentina Boeva, Andrei Zinovyev, and Eric Bonnet

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Stylometry with R: A Package for Computational Text Analysis, Maciej Eder, Jan Rybicki, and Mike Kestemont

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micompr: An R Package for Multivariate Independent Comparison of Observations, Nuno Fachada, João Rodrigues, Vitor V. Lopes, Rui C. Martins, and Agostinho C. Rosa

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Nonparametric Tests for the Interaction in Two-way Factorial Designs Using R, Jos Feys

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Exploring Interaction Effects in Two-Factor Studies using the hiddenf Package in R., Christopher Franck and Jason A. Osborne

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Subgroup Discovery with Evolutionary Fuzzy Systems in R: The SDEFSR Package, Ángel M. García, Francisco Charte, Pedro González, Cristóbal J. Carmona, and María J. del Jesus

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Qtools: A Collection of Models and Tools for Quantile Inference, Marco Geraci

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statmod: Probability Calculations for the Inverse Gaussian Distribution, Göknur Giner and Gordon K. Smyth

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easyROC: An Interactive Web-tool for ROC Curve Analysis Using R Language Environment, Dincer Goksuluk, Selcuk Korkmaz, Gokmen Zararsiz, and A Ergun Karaagaoglu

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Spatio-Temporal Interpolation using gstat, Benedikt Gräler, Edzer Pebesma, and Gerard Heuvelink

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diverse: An R Package to Analyze Diversity in Complex Systems, Miguel R. Guevara, Dominik Hartmann, and Marcelo Mendoza

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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R Foundation News, Torsten Hothorn

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progenyClust: An R package for Progeny Clustering, Chenyue W. Hu and Amina A. Qutub

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mctest: An R Package for Detection of Collinearity among Regressors, Muhammad Imdadullah, Muhammad Aslam, and Saima Altaf

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Weighted Distance Based Discriminant Analysis: The R Package WeDiBaDis, Itziar Irigoien, Francesc Mestres, and Concepcion Arenas

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An Interactive Survey Application for Validating Social Network Analysis Techniques, Mitchell Joblin and Wolfgang Mauerer

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R Packages to Aid in Handling Web Access Logs, Oliver Keyes, Bob Rudis, and Jay Jacobs

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nmfgpu4R: GPU-Accelerated Computation of the Non-Negative Matrix Factorization (NMF) Using CUDA Capable Hardware, Sven Koitka and Christoph M. Friedrich

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Editorial, Michael Lawrence

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Editorial, Michael Lawrence

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Crowdsourced Data Preprocessing with R and Amazon Mechanical Turk, Thomas J. Leeper

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Estimability Tools for Package Developers, Russell V. Lenth

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quickpsy: An R Package to Fit Psychometric Functions for Multiple Groups, Daniel Linares and Joan López-Moliner

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quantreg.nonpar: An R Package for Performing Nonparametric Series Quantile Regression, Michael Lipsitz, Alexandre Belloni, Victor Chernozhukov, and Iván Fernández-Val

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Variants of Simple Correspondence Analysis, Rosaria Lombardo and Eric J. Beh

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condSURV: An R Package for the Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data, Luis Meira-Machado and Meira-Machado Sestelo

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Heteroscedastic Censored and Truncated Regression with crch, Jakob W. Messner, Georg J. Mayr, and Achim Zeileis

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QPot: An R Package for Stochastic Differential Equation Quasi-Potential Analysis, Christopher M. Moore, Christopher R. Stieha, Ben C. Nolting, Maria K. Cameron, and Karen C. Abbott

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Distance Measures for Time Series in R: The TSdist Package, Usue Mori, Alexander Mendiburu, and Jose A. Lozano

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SchemaOnRead: A Package for Schema-on-Read in R, Michael J. North

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water: Tools and Functions to Estimate Actual Evapotranspiration Using Land Surface Energy Balance Models in R, Guillermo Federico Olmedo, Samuel Ortega-Farías, Daniel de la Fuente-Sáiz, David Fonseca- Luego, and Fernando Fuentes-Peñailillo

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Measurement Units in R, Edzer Pebesma, Thomas Mailund, and James Hiebert

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dCovTS: Distance Covariance/Correlation for Time Series, Maria Pitsillou and Konstantinos Fokianos

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Model Builder for Item Factor Analysis with OpenMx, Joshua N. Pritikin and Karen M. Schmidt

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Changes in R, R Core Team

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Changes in R, R Core Team

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Conference Report: useR! 2016, Joe Rickert

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Computing Pareto Frontiers and Database Preferences with the rPref Package, Patrick Roocks

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An Introduction to Principal Surrogate Evaluation with the pseval Package, Michael C. Sachs and Erin E. Gabriel

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Escape from Boxland, Barret Schloerke, Hadley Wickham, Dianne Cook, and Heike Hofmann

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comf: An R Package for Thermal Comfort Studies, Marcel Schweiker

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mclust 5: Clustering, Classification and Density Estimation Using Gaussian Finite Mixture Models, Luca Scrucca, Michael Fop, T Brendan Murphy, and Adrian E. Raftery

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FWDselect: An R Package for Variable Selection in Regression Models, Marta Sestelo, Nora M. Villanueva, Luis Meira-Machado, and Javier Roca-Pardiñas

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multipleNCC: Inverse Probability Weighting of Nested Case-Control Data, Nathalie C. Støer and Sven Ove Samuelsen

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clustering.sc.dp: Optimal Clustering with Sequential Constraint by Using Dynamic Programming, Tibor Szkaliczki

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The R Journal (August 2016) 8(1): Complete Issue, The R Foundation

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The R Journal (December 2016) 8(2): Complete Issue, The R Foundation

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Simulating Correlated Binary and Multinomial Responses under Marginal Model Specification: The SimCorMultRes Package, Anestis Touloumis

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rnrfa: An R package to Retrieve, Filter and Visualize Data from the UK National River Flow Archive, Claudia Vitolo, Matthew Fry, and Wouter Buytaert

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Gender Prediction Methods Based on First Names with genderizeR, Kamil Wais

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tigris: An R Package to Access and Work with Geographic Data from the US Census Bureau, Kyle Walker

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Ake: An R Package for Discrete and Continuous Associated Kernel Estimations, Wanbitching E. Wansouwé, Sobom M. Somé, and Célestin C. Kokonendji

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sbtools: A Package Connecting R to Cloud-based Data for Collaborative Online Research, Luke A. Winslow, Scott Chamberlain, Alison P. Appling, and Jordan S. Read

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Using DECIPHER v2.0 to Analyze Big Biological Sequence Data in R, Erik S. Wright

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Variable Clustering in High-Dimensional Linear Regression: The R Package clere, Loïc Yengo, Julien Jacques, Christophe Biernacki, and Mickael Canouil

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Normal Tolerance Interval Procedures in the tolerance Package, Derek S. Young

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ggfortify: Unified Interface to Visualize Statistical Results of Popular R Packages, Yuan Yuan, Masaaki Horikoshi, and Wenxuan Li

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mixtox: An R Package for Mixture Toxicity Assessment, Xiang-Wei Zhu and Jian-Yi Chen

2015

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fanplot: An R Package for Visualising Sequential Distributions, Guy J. Abel

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Fitting Conditional and Simultaneous Autoregressive Spatial Models in hglm, Moudud Alam, Lars Rönnegård, and Xia Shen

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Frames2: A Package for Estimation in Dual Frame Surveys, Antonio Arcos, David Molina, Maria Giovanna Ranalli, and Maria del Mar Rueda

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Identifying Complex Causal Dependencies in Configurational Data with Coincidence Analysis, Michael Baumgartner and Alrik Thiem

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News from the Bioconductor Project, Bioconductor Team

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treeClust: An R Package for Tree-Based Clustering Dissimilarities, Samuel E. Buttrey and Lyn R. Whitaker

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rdrobust: An R Package for Robust Nonparametric Inference in Regression-Discontinuity Designs, Sebastian Calonico, Matias D. Cattaneo, and Rocío Titiunik

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QuantifQuantile: An R Package for Performing Quantile Regression Through Optimal Quantization, Isabelle Charlier, Davy Paindaveine, and Jérôme Saracco

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Working with Multilabel Datasets in R: The mldr Package, Francisco Charte and David Charte

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VSURF: An R Package for Variable Selection Using Random Forests, Robin Genuer, Jean-Michel Poggi, and Christine Tuleau-Malot

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Editorial, Bettina Grün

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Editorial, Bettina Grün

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Numerical Evaluation of the Gauss Hypergeometric Function with the hypergeo Package, Robin K. S. Hankin

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The Complex Multivariate Gaussian Distribution, Robin K.S. Hankin

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Manipulation of Discrete Random Variables with discreteRV, Eric Hare, Andreas Buja, and Heike Hofmann

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mmpp: A Package for Calculating Similarity and Distance Metrics for Simple and Marked Temporal Point Processes, Hideitsu Hino, Ken Takano, and Noboru Murata

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R Foundation News, Kurt Hornik

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Changes on CRAN, Kurt Hornik and Achim Zeileis

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Changes on CRAN, Kurt Hornik and Achim Zeileis