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2011

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Quality Assessment of Filtered Smoked Yellowfin Tuna (Thunnus albacares) Steaks, Lori F. Pivarnik, Cameron Faustman, Santiago Rossi, Surendranath P. Suman, Catherine Palmer, Nicole L. Richard, P. Christopher Ellis, and Michael DiLiberti

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Recreational fishing depredation and associated behaviors involving common bottlenose dolphins (Tursiops truncatus) in Sarasota Bay, Florida, Jessica R. Powell and Randall S. Wells

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Time to Evolve? Potential Evolutionary Responses of Fraser River Sockeye Salmon to Climate Change and Effects on Persistence, Thomas E. Reed, Daniel E. Schindler, Merran J. Hague, David A. Patterson, Eli Meir, Robin Waples, and Scott G. Hinch

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A simple photograph-based approach for discriminating between free-ranging long-finned (Globicephala melas) and short-finned (G. macrorhynchus) pilot whales off the east coast of the United States, Brenda K. Rone and Richard M. Pace III

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Revisiting the lower stratospheric water vapour trend from the 1950s to 1970s, H. K. Roscoe and K. H. Rosenlof

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Evidence of susceptibility to morbillivirus infection in cetaceans from the United States, T. K. Rowles, L. S. Schwacke, R. S. Wells, J. T. Saliki, L. Hansen, A. Hohn, F. Townsend, R. A. Sayre, and A. J. Hall

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Effects of vertical wind shear and cloud radiative processes on responses of rainfall to the large-scale forcing during pre-summer heavy rainfall over southern China, Xinyong Shen, Yi Wang, and Xiaofan Li

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Tropospheric temperature trends: history of an ongoing controversy, Peter W. Thorne, John R. Lanzante, Thomas C. Peterson, Dian J. Seidel, and Keith P. Shine

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Defining bottlenose dolphin (Tursiops truncatus) stocks based on environmental, physical, and behavioral characteristics, Jacalyn L. Toth, Aleta A. Hohn, Kenneth W. Able, and Antoinette M. Gorgone

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Genetic Monitoring Reveals Genetic Stability within and among Threatened Chinook Salmon Populations in the Salmon River, Idaho, Donald M. Van Doornik, Robin Waples, Melissa C. Baird, Paul Moran, and Ewann A. Berntson

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Individual variation in pup vocalizations and absence of behavioral signs of maternal vocal recognition in Weddell seals (Leptonychotes weddellii), Ilse C. Van Opzeeland, Sofie M. Van Parijs, Stephan Frickenhaus, Cornelia M. Kreiss, and Olaf Boebel

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Evaluating the utility of cox1 for cetacean species identification, A. Viricel and P. E. Rosel

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Interplay of individual interactions and turbidity affects the functional response of three-spined sticklebacks Gasterosteus aculeatus, K. W. Vollset and K. M, Bailey

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Can evidence for spatial and/or temporal genetic heterogeneity of North Pacific minke whales be explained by different mixture fractions of the same two core stocks, or is it necessary to postulate an additional stock (s)?, Robin Waples

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Population Genetic Structure and Life History Variability in Oncorhynchus nerka from the Snake River Basin, Robin Waples, Paul B. Aebersold, and Gary A. Winans

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Calculating Ne and Ne/N in age-structured populations: a hybrid Felsenstein-Hill approach, Robin Waples, Chi Do, and Julien Chopelet

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Estimating Contemporary Effective Population Size on the Basis of Linkage Disequilibrium in the Face of Migration, Robin Waples and Phillip R. England

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Inbreeding effective population size and parentage analysis without parents, Robin S. Waples and Ryan K. Waples

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Oceanographic coupling across three trophic levels shapes source–sink dynamics in marine metacommunities, J. Wilson White and Jameal F. Samhouri

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Recovery of logbooks and international marine data: the RECLAIM project, Clive Wilkinson, Scott D. Woodruff, Philip Brohan, Stefan Claesson, Eric Freeman, Frits Koek, Sandra J. Lubker, Catherine Marzin, and Dennis Wheeler

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Chilean Blue Whales as a Case Study to Illustrate Methods to Estimate Abundance and Evaluate Conservation Status of Rare Species, Rob Williams, Sharon L. Hedley, Trevor A. Branch, Mark B. Bravington, Alexandre N. Zerbini, and Ken P. Findlay

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The evolutionary origins of Syngnathidae: pipefishes and seahorses, A. B. Wilson and J. W. Orr

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ICOADS Release 2.5: extensions and enhancements to the surface marine meteorological archive, Scott D. Woodruff, Steven J. Worley, Sandra J. Lubker, Zaihua Ji, J. Eric Freeman, David I. Berry, Philip Brohan, Elizabeth C. Kent, Richard W. Reynolds, Shawn R. Smith, and Clive Wilkinson

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Eddies as offshore foraging grounds for melon-headed whales (Peponocephala electra), Phoebe A. Woodworth, Gregory S. Schorr, Robin W. Baird, Daniel L. Webster, Daniel J. McSweeney, M. Bradley Hanson, Russel D. Andrews, and Jeffrey J. Polovina

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Measuring information content from observations for data assimilations: utilities of spectral formulations demonstrated with radar observations, Qin Xu and Li Wei

2010

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Can bottom-up ocean CO2 fluxes be reconciled with atmospheric 13C observations?, Caroline B. Alden, John B. Miller, and James W. C. White

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The traceability/trackability of illegal trade in whale products: a proposal to evaluate the technical functionality of DNA registers, C. Scott Baker and R. L. Brownell Jr.

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Genetic evidence of illegal trade in protected whales links Japan with the US and South Korea, C. Scott Baker; Debbie Steel; Yeyong Choi; Hang Lee; Kyung Seok Kim; Sung Kyoung Choi; Yong-Un Ma; Charles Hambleton; Louie Psihoyos; R. L. Brownell Jr,; and Naoko Funahashi

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Validation of a homologous canine relaxin radioimmunoassay and application with pregnant and non-pregnant Northern fur seals (Callorhinus ursinus), Don R. Bergfelt, Bernard G. Steinetz, J. Lawrence Dunn, Shannon Atkinson, J. Ward Testa, and Gregg P. Adams

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Comparing Observations of Age at First Reproduction in Western Gray Whales to Estimates of Age at Sexual Maturity in Eastern Gray Whales, Amanda L. Bradford, David W. Weller, Aimée R. Lang, Grigory A. Tsidulko, Alexander M. Burdin, and Robert L. Brownell Jr.

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Double-Observer Line Transect Methods: Levels of Independence, Stephen T. Buckland, Jeffrey L. Laake, and David L. Borchers

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Genetic Assessment of the Mating System and Patterns of Egg Cannibalism in Atka Mackerel, M. F. Canino, I. B. Spies, J. L. Guthridge, and M. M. Hollowed

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Highly Discordant Nuclear and Mitochondrial DNA Diversities in Atka Mackerel, M. F. Canino, I. B. Spies, S. A. Lowe, and W. S. Grant

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Hierarchical Bayesian Spatial Models for Multispecies Conservation Planning and Monitoring, Carlos Carroll, Devin S. Johnson, Jeffrey R. Dunk, and William J. Zielinski

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A note on the unprecedented strandings of 56 deep-diving whales along the UK and Irish coast, Sarah J. Dolman, Eunice Pinn, Robert J. Reid, Jason P. Barley, Rob Deaville, Paul D. Jepson, Mick O’Connell, Simon Berrow, Rod S. Penrose, Peter T. Stevick, Susannah Calderan, Kevin P. Robinson, Robert L. Brownell Jr., and Mark P. Simmonds

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Photographic mark-recapture analysis of clustered mammal-eating killer whales around the Aleutian Islands and Gulf of Alaska, J. Durban, D. Ellifrit, M. Dahlheim, J. Waite, C. Matkin, L. Barrett-Lennard, G. Ellis, R. Pitman, R. LeDuc, and P. Wade

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Geographic Variation of Persistent Organic Pollutant Levels in Humpback Whale (Megaptera novaeangliae) Feeding Areas of the North Pacific and North Atlantic, Cristiane T. Elfes, Glenn R. Vanblaricom, Daryle Boyd, John Calambokidis, Phillip J. Clapham, Ronald W. Pearce, Jooke Robbins, Juan Carlos Salinas, Janice M. Straley, Paul R. Wade, and Margaret M. Krahn

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Early detection of population fragmentation using linkage disequilibrium estimation of effective population size, Phillip R. England, Gordon Luikart, and Robin Waples

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Crucial Role of Mechanisms and Modes of Toxic Action for Understanding Tissue Residue Toxicity and Internal Effect Concentrations of Organic Chemicals, Beate I. Escher, Roman Ashauer, Scott Dyer, Joop L. M. Hermens, Jong-Hyeon Lee, Heather A. Leslie, Philipp Mayer, James P. Meador, and Michael S. J. Warne

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Lake Michigan lower food web: Long-term observations and Dreissena impact, G. Fahnenstiel, T. Nalepa, S. Pothoven, H. Carrick, and D. Scavia

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International Geomagnetic Reference Field: the eleventh generation, C. C. Finlay, S. Maus, C. D. Beggan, T. N. Bondar, A. Chambodut, T. A. Chernova, A. Chulliat, V. P. Golovkov, B. Hamilton, M. Hamoudi, R. Holme, G. Hulot, W. Kuang, B. Langlais, V. Lesur, F. J. Lowes, H. Lühr, S. Macmillan, M. Mandea, S. McLean, C. Manoj, M. Menvielle, I. Michaelis, N. Olsen, J. Rauberg, M. Rother, T. J. Sabaka, A. Tangborn, L. Tøffner-Clausen, E. Thébault, A. W. P. Thomson, I. Wardinski, Z. Wei, and T. I. Zvereva

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Hydrological connectivity for riverine fish: measurement challenges and research opportunities, A. H. Fullerton, K. M. Burnett, E. A. Steel, R. L. Flitcroft, G. R. Pess, B. E. Feist, C. E. Torgersen, D. J. Miller, and B. L. Sanderson

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Effects of Spatial Pattern and Economic Uncertainties on Freshwater Habitat Restoration Planning: A Simulation Exercise, Aimee H. Fullerton, E. Ashley Steel, Ian Lange, and Yuko Caras

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Movements of satellite-monitored humpback whales from New Caledonia, Claire Garrigue, Alexandre N. Zerbini, Ygor Geyer, Mads-Peter Heide-Jørgensen, Wakao Hanaoka, and Phil Clapham

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Vertical profiles of CO2 above eastern Amazonia suggest a net carbon flux to the atmosphere and balanced biosphere between 2000 and 2009, L. V. Gatti, J. B. Miller, M. T. S. D'Amelio, A. Martinewski, L. S. Basso, M. E. Gloor, S. Wofsy, and P. Tans

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History and fate of a small isolated population of Weddell seals at White Island, Antarctica, Thomas S. Gelatt, Corey S. Davis, Ian Stirling, Donald B. Siniff, Curtis Strobeck, and Isabelle Delisle

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An Empirical Latent Heat Flux Parameterization for the Noah Land Surface Model, Christopher M. Godfrey and David J. Stensrud

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Dynamics of Strongly Nonlinear Kinks and Solitons in a Two-Layer Fluid, K. Gorshkov, L. A. Ostrovsky, and I. Soustova

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Meridional patterns in the deep scattering layers and top predator distribution in the central equatorial Pacific, Elliott L. Hazen and David W. Johnston

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A Model-Based Approach for Making Ecological Inference from Distance Sampling Data, Devin S. Johnson, Jeffrey L. Laake, and Jay M. Ver Hoef

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Long-term recovery patterns of arctic tundra after winter seismic exploration, Janet C. Jorgenson, Jay M. Ver Hoef, and M. T. Jorgenson

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Seasonal home ranges and fidelity to breeding sites among ringed seals, Brendan P. Kelly, Oriana H. Badajos, Mervi Kunnasranta, John R. Moran, Micaela Martinez-Bakker, Peter Boveng, and Douglas Wartzok

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System Dynamics Modeling of Corn Ethanol as a Bio Transportation Fuel in the United States, Deogratias Kibira, Guodong Shao, and Stephen Nowak

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ADVERSE OUTCOME PATHWAYS AND ECOLOGICAL RISK ASSESSMENT: BRIDGING TO POPULATION-LEVEL EFFECTS, Vincent J. Kramer, Matthew A. Etterson, Markus Hecker, Cheryl A. Murphy, Guritno Roesijadi, Daniel J. Spade, Julann A. Spromberg, Magnus Wang, and Gerald T. Ankley

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Compromising genetic diversity in the wild: unmonitored large-scale release of plants and animals, Linda Laikre, Michael K. Schwartz, Robin Waples, Nils Ryman, and GeM Working Group

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Foraging effort of juvenile Steller sea lions Eumetopias jubatus with respect to heterogeneity of sea surface temperature, Michelle E. Lander, Thomas R. Loughlin, Miles G. Logsdon, Glenn R. VanBlaricom, and Brian Fadely

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Genetic Differentiation Between Western and Eastern (Eschrichtius robustus) Gray Whale Populations Using Microsatellite Markers, Aimee R. Lang, David W. Weller, Richard G. Leduc, Alexander M. Burdin, and Robert L. Brownell Jr.

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Dreissenid mussels are not a “dead end” in Great Lakes food webs, Charles P. Madenjian, Steven A. Pothoven, Philip J. Schneeberger, Mark P. Ebener, Lloyd C. Mohr, Thomas F. Nalepa, and James R. Bence

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Long-term survival of humpback whales radio-tagged in Alaska from 1976 through 1978, Sally Mizroch, Michael F. Tillman, Susan Jurasz, Janice Straley, Olga von Ziegesar, Louis Herman, Adam Pack, Scott Baker, Jim Darling, Debbie Glockner-Ferrari, Mark Ferrari, Dan Salden, and P J. Clapham

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Adapting MODIS-derived LAI and fractional cover into the RAMS in East Africa, Nathan Moore, Nathan Torbick, Brent Lofgren, Jing Wang, Bryan Pijanowski, Jeffrey Andresen, Dong-Yun Kim, and Jennifer Olson

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Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species, Phillip A. Morin, Frederick I. Archer, Andrew D. Foote, Julia Vilstrup, Eric E. Allen, Paul Wade, John Durban, Kim Parsons, Robert Pitman, Lewyn Li, Pascal Bouffard, Sandra C. Abel Nielsen, Morten Rasmussen, Eske Willerslev, M. Thomas P. Gilbert, and Timothy Harkins

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Predicting the occurrence of Atlantic bluefin tuna (Thunnus thynnus) larvae in the northern Gulf of Mexico: building a classification model from archival data, Barbara A. Muhling, John T. Lamkin, and Mitchell A. Roffer

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An Overview of the Spread, Distribution, and Ecological Impacts of the Quagga Mussel, Dreissena rostriformis bugensis, with Possible Implications to the Colorado River System, Thomas F. Nalepa

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Recent changes in density, biomass, recruitment, size structure, and nutritional state of Dreissena populations in southern Lake Michigan, Thomas F. Nalepa, David L. Fanslow, and Steven A. Pothoven

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Mandibular fractures in short-finned pilot whales, Globicephala macrorhynchus, Mollie Sue Oremland, Bernadette Allen, P J. Clapham, Michael Moore, Charley Potter, and James G. Mead

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A mixed-model moving-average approach to geostatistical modeling in stream networks, Erin E. Peterson and Jay M. Ver Hoef

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Social cohesion among kin, gene flow without dispersal and the evolution of population genetic structure in the killer whale (Orcinus orca), M. Pilot, M. E. Dahlheim, and A. R. Hoelzel

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Interacting Effects of Phenotypic Plasticity and Evolution on Population Persistence in a Changing Climate, Thomas E. Reed, Daniel E. Schindler, and Robin Waples

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Phenotypic plasticity and population viability: the importance of environmental predictability, Thomas E. Reed, Robin Waples, Daniel E. Schindler, Jeffrey J. Hard, and Michael T. Kinnison

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Results from the April 2009 Gulf of Alaska Line Transect Survey (GOALS) in the Navy Training Exercise Area, B. K. Rone, A. B. Douglas, A. N. Zerbini, L. Morse, A. Martinez, P. J. Clapham, and J. Calambokidis

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Regional seismicity of the Mid-Atlantic Ridge: observations from autonomous hydrophone arrays, N. Simão, J. Escartín, J. Goslin, J. Haxel, M. Cannat, and R. Dziak

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Fisheries buybacks: a review and guidelines, Dale Squires

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When are genetic methods useful for estimating contemporary abundance and detecting population trends?, David A. Tallmon, Dave Gregovich, Robin Waples, C. Scott Baker, Jennifer Jackson, Barbara L. Taylor, Eric Archer, Karen K. Martien, Fred W. Allendorf, and Michael K. Schwartz

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Distance software: design and analysis of distance sampling surveys for estimating population size, Len Thomas, Stephen T. Buckland, Eric A. Rexstad, Jeff L. Laake, Samantha Strindberg, Sharon L. Hedley, Jon R.B. Bishop, Tiago A. Marques, and Kenneth P. Burnham

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Dreissena and the disappearance of the spring phytoplankton bloom in Lake Michigan, Henry A. Vanderploeg, James R. Liebig, Thomas F. Nalepa, Gary L. Fahnenstiel, and Steven A. Pothoven

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Fast computing of some generalized linear mixed pseudo-models with temporal autocorrelation, Jay M. Ver Hoef, Josh M. London, and Peter L. Boveng

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High-grading bias: subtle problems with assessing power of selected subsets of loci for population assignment, Robin Waples

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Spatial-temporal stratifications in natural populations and how they affect understanding and estimation of effective population size, Robin Waples

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Linkage disequilibrium estimates of contemporary Ne using highly variable genetic markers: a largely untapped resource for applied conservation and evolution, Robin Waples and Chi Do

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Eco-evolutionary dynamics: fluctuations in population growth rate reduce effective population size in chinook salmon, Robin Waples, David Jensen, and Michelle McClure

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Stabilization of Fragments to Enhance Asexual Recruitment in Acropora Palmata, a Threatened Caribbean Coral, Dana E. Williams and Margaret W. Miller

2009

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Alaska Marine Mammal Stock Assessments, 2008, R. P. Angliss and B. M. Allen

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Population Structure of Island-Associated Dolphins: Evidence from Photo-Identification of Common Bottlenose Dolphins (Tursiops truncates) in the Main Hawaiian Islands, Robin Baird, Antoinette Gorgone, Daniel McSweeney, Allan Ligon, Mark Deakos, Daniel Webster, Gregory Schorr, Karen Martien, Dan Salden, and Sabre Mahaffy

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MOVEMENTS OF SATELLITE-TAGGED CUVIER’S AND BLAINVILLE’S BEAKED WHALES IN HAWAI‘I: EVIDENCE FOR AN OFFSHORE POPULATION OF BLAINVILLE’S BEAKED WHALES, Robin W. Baird, Gregory S. Schorr, Daniel L. Webster, Sabre D. Mahaffy, Daniel J. McSweeney, M. Bradley Hanson, and Russel D. Andrews

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A fish of many scales: extrapolating sublethal pesticide exposures to the productivity of wild salmon populations, David H. Baldwin, Julann A. Spromberg, Tracy K. Collier, and Nathaniel L. Scholz

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Anthropogenic Scarring of Western Gray Whales (Eschrichtius robustus), Amanda Bradford, David Weller, Yulia Ivaschenko, Alexander Burdin, and Robert L. Brownell Jr.

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Behavior of Melon-Headed Whales, Peponocephala electra, Near Oceanic Islands, Robert L. Brownell Jr., Katherine Ralls, Simone Baumann-Pickering, and M. Michael Poole

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Worldwide Review Of Pygmy Killer Whales, Feresa attenuate, Mass Strandings Reveals Taiwan Hot Spot, Robert L. Brownell Jr., C.-J. Yao, Chia-Shan Lee, and Ming-Chih Wang

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Status of western gray whales off northeastern Sakhalin Island, Russia, in 2008, Alexander M. Burdin, Grigory A. Tsidulko, Maxim Sidorenko, Amanda L. Bradford, David W. Weller, and Robert L. Brownell Jr.

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Insights into the population structure of blue whales in the Eastern North Pacific from recent sightings and photographic identification, John Calambokidis, Jay Barlow, John K. B. Ford, Todd E. Chandler, and Annie B. Douglas

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Draft U.S. Pacific Marine Mammal Stock Assessments: 2009, James V. Carretta, Karin A. Forney, Mark S. Lowry, Jay Barlow, Jason Baker, Dave Johnston, Brad Hanson, Robert L. Brownell Jr., Jooke Robbins, David K. Mattila, Katherine Ralls, Marcia M. Muto, Deanna Lynch, and Lilian Carswell

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U.S. Pacific Marine Mammal Stock Assessments: 2009, James V. Carretta, Karin A. Forney, Mark S. Lowry, Jay Barlow, Jason Baker, Dave Johnston, Brad Hanson, Robert L. Brownell Jr., Jooke Robbins, David K. Mattila, Katherine Ralls, Marcia M. Muto, Deanna Lynch, and Lilian Carswell

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Sex change and the genetic structure of marine fish populations, Julien Chopelet, Robin Waples, and Stefano Mariani

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Catches of Humpback Whales, Megaptera novaeangliae, by the Soviet Union and Other Nations in the Southern Ocean, 1947–1973, Phil Clapham, Yuri Mikhalev, Wally Franklin, David Paton, C. Scott Baker, Yulia V. Ivashchenko, and Robert L. Brownell Jr.

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Accounting for uncertainty in ecological analysis: the strengths and limitations of hierarchical statistical modeling, Noel Cressie, Catherine A. Calder, James S. Clark, Jay M. Ver Hoef, and Christopher K. Wikle

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Cetaceans of Southeast Alaska: Distribution and Seasonal Occurrence, Marilyn E. Dahlheim, Janice M. Waite, and Paula A. White

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Treatment of Northern Fur Seal (Callorhinus ursinus) Pups with Ivermectin Reduces Hookworm-Induced Mortality, Robert Delong, Anthony Orr, Ryan Jenkinson, and Eugene T. Lyons

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Harvesting Young-of-the-Year from Large Mammal Populations: An Application of Systemic Management, C. W. Fowler, T. E. Jewell, and M.V. Lee

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Spatial modelling and prediction on river networks: up model, down model or hybrid?, Vincent Garreta, Pascal Monestiez, and Jay M. Ver Hoef

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Contrasting patterns of genetic diversity at three different genetic markers in a marine mammal metapopulation, J. I. Hoffman, K. K. Dasmahapatra, W. Amos, C. D. Phillips, T. S. Gelatt, and J . W. Bickham