The Department of Plant Pathology at the University of Nebraska-Lincoln (UNL) has a long tradition of excellence in research and service to the state,the nation, and internationally. Our mission is to provide solutions to plant disease and health issues, develop new knowledge of plant-pathogenic and plant-associated microorganisms, and provide quality, relevant education.

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2010

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The spatial influence of aboveground diversity on belowground communities, T. Bliss, Thomas O. Powers, and Chad Brassil

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MELOIDOGYNE SPP. INFECTING ORNAMENTAL PLANTS IN FLORIDA, J. A. Brito, R. Kaur, R. Cetintas, J. D. Stanley, M. L. Mendes, Thomas O. Powers, and D. W. Dickson

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Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.), Shiaoman Chao, Jorge Dubcovsky, Jan Dvorak, Ming-Cheng Luo, P. Stephen Baenziger, Rustam Matnyazov, Dale R. Clark, Luther E. Talbert, James A. Anderson, Susanne Dreisigacker, Karl Glover, Jianli Chen, Kim Campbell, Phil L. Bruckner, Jackie C. Rudd, Scott Haley, Brett F. Carver, Sid Perry, Mark E. Sorrells, and Eduard D. Akhunov

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Unique Functionality of 22 nt miRNAs in Triggering RDR6-Dependent siRNA Biogenesis from Target Transcripts in Arabidopsis, Josh T. Cuperus, Alberto Carbonell, Noah Fahlgren, Hernan Garcia-Ruiz, Russell T. Burke, Atsushi Takeda, Christopher M. Sullivan, Sunny D. Gilbert, Taiowa A. Montgomery, and James C. Carrington

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Upper Canopy Collection and Identification of Grapevines (Vitis) from Selected Forests in the Southeastern United States, Sydney E. Everhart

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Isolation of the phycodnavirus PBCV-1 by biological laser printing, Lisa A. Fitzgerald, Peter K. Wu, James Gurnon, Justin C. Biffinger, Bradley R. Ringeisen, and James L. Van Etten

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Isolation of the phycodnavirus PBCV-1 by biological laser printing, Lisa A. Fitzgerald, Peter K. Wu, James R. Gurnon, Justin C. Biffinger, Bradley R. Ringeisen, and James L. Van Etten

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Alteration in Lignin Biosynthesis Restricts Growth of Fusarium spp. in Brown Midrib Sorghum, Deanna L. Funnell-Harris, Jeffrey F. Pedersen, and Scott E. Sattler

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Soil and root populations of fluorescent Pseudomonas spp. associated with seedlings and field-grown plants are affected by sorghum genotype, Deanna L. Funnell-Harris, Jeffrey F. Pedersen, and Scott E. Sattler

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Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection, Hernan Garcia-Ruiz, Atsushi Takeda, Elisabeth J. Chapman, Christopher M. Sullivan, Noah Fahlgren, Katherine J. Brempelis, and James C. Carrington

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Importance of Myxomycetes in Biological Research and Teaching, Harold W. Keller and Sydney E. Everhart

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Morphological and Molecular Characterization of Discocriconemella inarata, an Endemic Nematode from North American Native Tallgrass Prairies, Thomas O. Powers, Timothy Harris, Rebecca Higgins, Lisa Sutton, and Kirsten S. Powers

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Brown midrib mutations and their importance to the utilization of maize, sorghum, and pearl millet lignocellulosic tissues, Scott E. Sattler, Deanna L. Funnell-Harris, and Jeffrey F. Pedersen

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Regulation of Septum Formation by the Bud3–Rho4 GTPase Module in Aspergillus nidulans, Haoyu Si, Daniela Justa-Schuch, Stephan Seiler, and Steven D. Harris

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Heterologous minor coat proteins of Citrus tristeza virus strains affect encapsidation, but the coexpression of HSP70h and p61 restores encapsidation to wild-type levels, Satyanarayana Tatineni, Siddarame Gowda, and William O. Dawson

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Wheat Cultivar-Specific Disease Synergism and Alteration of Virus Accumulation During Co-Infection with Wheat streak mosaic virus and Triticum mosaic virus, Satyanarayana Tatineni, Robert A. Graybosch, Gary L. Hein, Stephen N. Wegulo, and Roy French

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Initial Events Associated with Virus PBCV-1 Infection of Chlorella NC64A, Gerhard Thiel, Anna Moroni, David Dunigan, and James L. Van Etten

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DNA Viruses: The Really Big Ones (Giruses), James L. Van Etten, Leslie C. Lane, and David Dunigan

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Deep and Comparative Transcriptome Analysis of Rice Plants Infested by the Beet Armyworm (Spodoptera exigua) and Water Weevil (Lissorhoptrus oryzophilus), R. C. Venu, M. Sheshu Madhav, M. V. Sreerekha, Kan Nobuta, Yuan Zhang, Peter Carswell, Michael J. Boehm, B C. Meyers, Kenneth L. Korth, and Guo-Liang Wang

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Microarray Analysis of Paramecium bursaria Chlorella Virus 1 Transcription, Giane M. Yanai-Balser, Garry A. Duncan, James D. Eudy, Dong Wang, Xiao Li, Irina V. Agarkova, David Dunigan, and James L. Van Etten

2009

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Plant-Microbes Interactions in Enhanced Fertilizer-Use Efficiency, Anthony O. Adesemoye and Joseph W. Kloepper

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Plant Growth-Promoting Rhizobacteria Allow Reduced Application Rates of Chemical Fertilizers, A. O. Adesemoye, H. A. Torbert, and J. W. Kloepper

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An icosahedral algal virus has a complex unique vertex decorated by a spike, Mickaël V. Cherrier, Victor A. Kostyuchenko, Chuan Xiao, Valorie D. Bowman, Anthony J. Battisti, Xiaodong Yan, Paul R. Chipman, Timothy S. Baker, James L. Van Etten, and Michael G. Rossmann

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Chlorella virus ATCV-1 encodes a functional potassium channel of 82 amino acids, Sabrina Gazzarrini, Ming Kang, Alessandra Abenavoli, Giulia Romani, Claudio Olivari, Daniele Gaslini, Giuseppina Ferrara, James L. Van Etten, Michael Kreim, Stefan M. Kast, Gerhard Thiel, and Anna Moroni

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Accumulation of a 5′ proximal subgenomic RNA of Citrus tristeza virus is correlated with encapsidation by the minor coat protein, Siddarame Gowda, Satyanarayana Tatineni, Svetlana Y. Folimonova, Mark E. Hilf, and William O. Dawson

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Chlorella viruses prevent multiple infections by depolarizing the host membrane, Timo Greiner, Florian Frohns, Ming Kang, James L. Van Etten, Anja Käsmann, Anna Moroni, Brigitte Hertel, and Gerhard Thiel

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The Majority of the Type III Effector Inventory of Pseudomonas syringae pv. tomato DC3000 Can Suppress Plant Immunity, Ming Guo, Fang Tian, Yashitola Wamboldt, and James R. Alfano

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Education in Plant Pathology Present Status and Future Challenges, James MacDonald, Caitilyn Allen, David Gadoury, William Jacobi, Segenet Kelemu, James Moyer, Tim Murray, Kevin Ong, Charles Pearson, John Sherwood, and Ann Vidaver

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First Report of Columbia Root-Knot Nematode (Meloidogyne chitwoodi) in Potato in Turkey, A. Ozarslandan, Z. Devran, N. Mutlu, and I. H. Elekcioglu

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Rathayibacter iranicus isolated from symptomless wheat seeds in Turkey, E. Postnikova, Irina V. Agarkova, S. Altundag, F. Eskandari, A. Sechler, A. Karahan, A. K. Vidaver, W. Schneider, M. Ozakman, and N. W. Schaad

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A Nonsense Mutation in a Cinnamyl Alcohol Dehydrogenase Gene Is Responsible for the Sorghum brown midrib6 Phenotype1[W][OA], Scott E. Sattler, Aaron J. Saathoff, Eric J. Haas, Nathan A. Palmer, Deanna L. Funnell-Harris, Gautam Sarath, and Jeffrey F. Pedersen

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CHOLINE-UTILIZING MICROBLAL STRAINS FOR BIOLOGICALLY CONTROLLING FUSARIUM HEAD BLIGHT, David A. Schisler, Naseem I. Khan, Michael J. Boehm, and Patricia J. Slininger

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Characterization of the 5′- and 3′-Terminal Subgenomic RNAs Produced by a Capillovirus: Evidence for a CP Subgenomic RNA, Satyanarayana Tatineni, Mohammad R. Afunian, Siddarame Gowda, Mark E. Hilf, Moshe Bar-Joseph, and William O. Dawson

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Molecular Characterization of Citrus tatter leaf virus Historically Associated with Meyer Lemon Trees: Complete Genome Sequence and Development of Biologically Active In Vitro Transcripts, Satyanarayana Tatineni, Mohammad R. Afunian, Mark E. Hilf, Siddarame Gowda, William O. Dawson, and Stephen M. Garnsey

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Triticum mosaic virus: A Distinct Member of the Family Potyviridae with an Unusually Long Leader Sequence, Satyanarayana Tatineni, Amy D. Ziems, Stephen N. Wegulo, and Roy French

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Preface to Lesser Known Large dsDNA Viruses. Current Topics in Microbiology and Immunology 328, James L. Van Etten

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Dollar Spot Fungus Sclerotinla homoeocarpa Produces Oxalic Acid, R. C. Venu, Robert A. Beaulieu, Terrance L. Graham, Ainhoa Martinez Medina, and Michael J. Boehm

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Effect of Growth Stage on the Relationship Between Tan Spot and Spot Blotch Severity and Yield in Winter Wheat, Stephen N. Wegulo, Julie A. Breathnach, and P. Stephen Baenziger

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The Phycodnaviridae: The Story of How Tiny Giants Rule the World, W. H. Wilson, James L. Van Etten, and M. J. Allen

2008

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Comparison of Plant Growth-Promotion with Pseudomonas aeruginosa and Bacillus subtilis in Three Vegetables, A. O. Adesemoye, M. Obini, and E. O. Ugoji

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Enhanced Plant Nutrient Use Efficiency with PGPR and AMF in an Integrated Nutrient Management System, A. O. Adesemoye, H. A. Torbert, and J. W. Kloepper

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Chlorovirus-Mediated Membrane Depolarization of Chlorella Alters Secondary Active Transport of Solutes, Irina V. Agarkova, David Dunigan, James R. Gurnon, Timo Greiner, Julia Barres, Gerhard Thiel, and James L. Van Etten

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An Immunofluorescence Assay to Detect Urediniospores of Phakopsora pachyrhizi, Fulya Baysal-Gurel, Melanie L. Lewis Ivey, Anne Dorrance, Douglas Luster, Reid Frederick, Jill Czarnecki, Michael J. Boehm, and Sally A. Miller

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Integrated Management Strategies for Phytophthora sojae Combining Host Resistance and Seed Treatments, A. E. Dorrance, A. E. Robertson, S. Cianzo, L. J. Giesler, C. R. Grau, M. A. Draper, A. U. Tenuta, and T. R. Anderson

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Putative Gene Promoter Sequences in the Chlorella Viruses, Lisa Fitzgerald, Philip Boucher, Giane Yanai-Balser, Karsten Suhre, Michael Graves, and James L. Van Etten

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Citrus Tristeza Virus: Survival at the Edge of the Movement Continuum, Svetlana Y. Folimonova, Alexey S. Folimonov, Satyanarayana Tatineni, and William O. Dawson

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Inoculation strategies to assess biological interactions between Fusarium and Alternaria species infecting sorghum, Deanna L. Funnell-Harris and Jeffrey F. Pedersen

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Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems, Steven D. Harris

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Virulence Diversity of the Common Bean Rust Pathogen Within and Among Individual Bean Fields and Development of Sampling Strategies, C. Jochua, M. I. V. Amane, J. R. Steadman, X. Xue, and K. M. Eskidge

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Rapid Development of Fungicide Resistance by Sclerotinia homoeocarpa on Turfgrass, Young-Ki Jo, Seog Won Chang, Michael J. Boehm, and Geunhwa Jung

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First Report of Annual Bluegrass Weevil, Listronotus maculicollis, Damage in Ohio, John L. Koenig, David J. Shetlar, Joseph W. Rimelspach, and Michael J. Boehm

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A DGGE-cloning method to characterize arbuscular mycorrhizal community structure in soil, Zhanbei Liang, Rhae A. Drijber, Donald J. Lee, Ismail M. Dwiekat, Steven D. Harris, and David A. Wedin

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An Antibiotic Complex from Lysobacter enzymogenes Strain C3: Antimicrobial Activity and Role in Plant Disease Control, S. Li, C. C. Jochum, F. Yu, K. Zaleta-Rivera, L. Du, Steven D. Harris, and Gary Y. Yuen

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Epigenetic transcriptional repression of cellular genes by a viral SET protein, Shiraz Mujtaba, Karishma L. Manzur, James Gurnon, Ming Kang, James L. Van Etten, and Ming-Ming Zhou

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Differential Pathogenicity of Xanthomonas campestris pv. phaseoli and X. fuscans subsp. fuscans Strains on Bean Genotypes with Common Blight Resistance, N. Mutlu; A. K. Vidaver; D. P. Coyne; J. R. Steadman; P. A, Lambrecht; and J. Reiser

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Reclassification of Subspecies of Acidovorax avenae as A. Avenae (Manns 1905) emend., A. cattleyae (Pavarino, 1911)comb.nov., A. citrulli Schaad et al.,1978)comb.nov., and proposal of A. oryzae sp. nov., Norman Schaad, Elena Postnikova, Aaron Sechler, Larry E. Claflin, Anne K. Vidaver, Jeffrey B. Jones, Irina V. Agarkova, Alexander Ignatov, Ellen Dickstein, and Bruce A. Ramundo

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Myron Kendall Brakke: 1921 to 2007, Karen-Beth G. Scholthof, Andrew O. Jackson, and James L. Van Etten

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Regulation of Apical Dominance in Aspergillus nidulans Hyphae by Reactive Oxygen Species, Camile P. Semighini and Steven D. Harris

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Complete nucleotide sequence of a maize chlorotic mottle virus isolate from Nebraska, Drake Stenger and Roy C. French

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Three genes of Citrus tristeza virus are dispensable for infection and movement throughout some varieties of citrus trees, Satyanarayana Tatineni, Cecile J. Robertson, Stephen M. Garnsey, Moshe Bar-Joseph, Siddarame Gowda, and William O. Dawson

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In Planta Distribution of ‘Candidatus Liberibacter asiaticus’ as Revealed by Polymerase Chain Reaction (PCR) and Real-Time PCR, Satyanarayana Tatineni, Uma Shankar Sagaram, Siddarame Gowda, Cecile J. Robertson, William O. Dawson, Toru Iwanami, and Nian Wang

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First Report of Soybean Rust Caused by Phakopsora pachyrhizi in Nebraska, S. R. Watson, L. J. Giesler, A. D. Ziems, and T. E. Brovont

2007

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Association of ergot alkaloids with conidiation in Aspergillus fumigatus, Christine M. Coyle, Shawn C. Kenaley, William R. Rittenour, and Daniel G. Panaccione

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Functional characterization of the Aspergillus fumigatus calcineurin, Márcia Eliana da Silva Ferreira, Thorsten Heinekamp, Albert Hartl, Axel A. Brakhage, Camile P. Semighini, Steven D. Harris, Marcela Savoldi, Paula Fagundes de Gouvêa, Maria Helena de Souza Goldman, and Gustavo H. Goldman

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FREE-LIVING DORYLAIMID NEMATODES FROM NATURE RESERVES IN COSTA RICA. THE GENUS PACHYDORYLAIMUS SIDDIQI, 1983, A. Esquivel, P. Guerrero, R. Peña-Santiago, and Thomas O. Powers

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Genetic Diversity in Populations of Xanthomonas campestris pv. campestris in Cruciferous Weeds in Central Coastal California, A. Ignatov, A. Sechler, E. L. Schuenzel, I. Agarkova, B. Oliver, A. K. Vidaver, and N. W. Schaad

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Genetic Diversity in Populations of Xanthomonas campestris pv. campestris in Cruciferous Weeds in Central Coastal California, A. Ignatov, A. Sechler, E. L. Schuenzel, Irina V. Agarkova, B. Oliver, A. K. Vidaver, and N. W. Schaad

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Expression Analysis of Rice Defense-Related Genes in Turfgrass in Response to Magnaporthe grisea, Young-Ki Jo, Guo-Liang Wang, and Michael J. Boehm

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basA Regulates Cell Wall Organization and Asexual/Sexual Sporulation Ratio in Aspergillus nidulans, Shaojie Li, Dapeng Bao, Gary Yuen, Steven D. Harris, and Ana M. Calvo

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SOYBEAN FGAM SYNTHASE PROMOTERS USEFUL IN NEMATODE CONTROL: U.S. Patent No. US 7,223,901 B2, Sally Ann MacKenzie and Zarir Vaghchhipawala

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Genetic analysis of a novel Alaska barley yellow dwarf virus in the family Luteoviridae, N.L. Robertson and Roy C. French

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Genetic structure in natural populations of barley/cereal yellow dwarf virus isolates from Alaska, N.L. Robertson and Roy C. French

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Wheat streak mosaic virus Lacking Helper Component-Proteinase Is Competent to Produce Disease Synergism in Double Infections with Maize chlorotic mottle virus, Drake C. Stenger, Brock A. Young, Feng Qu, Thomas Jack Morris, and Roy French

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Regulation of hyphal morphogenesis by cdc42 and rac1 homologues in Aspergillus nidulans, Aleksandra Virag, Maurice P. Lee, Haoyu Si, and Steven D. Harris

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Structure and Biosynthesis of Heat-Stable Antifungal Factor (HSAF), a Broad-Spectrum Antimycotic with a Novel Mode of Action, Fengan Yu, Kathia Zaleta-Rivera, Xiangcheng Zhu, Justin Huffman, Jeffrey C. Millet, Steven D. Harris, Gary Yuen, Xing-Cong Li, and Liangcheng Du

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Response of Soybean Cultivars to Bean pod mottle virus Infection, Amy D. Ziems, Loren J. Giesler, George L. Graef, Margaret G. Redinbaugh, Jean L. Vacha, SueAnn Berry, Laurence V. Madden, and Anne E. Dorrance

2006

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A Position Paper on the Electronic Publication of Nematode Taxonomic Manuscripts, Eyualem Abebe, James G. Baldwin, Byron Adams, Duane Hope, Scott Gardner, Robin Huettel, Peter Mullin, Thomas O. Powers, Jyotsna Sharma, Weimin Ye, and William K. Thomas

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Microbial Content of Abattoir Wastewater and Its Contaminated Soil in Lagos, Nigeria, A. O. Adesemoye, B. O. Opere, and S. C. O. Makinde

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Genetic Characterization and Diversity of Rathayibacter toxicus, Irina V. Agarkova, A. K. Vidaver, E. N. Postnikova, I. T. Riley, and N. W. Schaad

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Cloning of Nt.CviQII Nicking Endonuclease and Its Cognate Methyltransferase: M.CviQII Methylates AG Sequence, Siu-Hong Chan, Zhenyu Zhu, David Dunigan, James L. Van Etten, and Shuang-yong Xu

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Influence of Lysobacter enzymogenes Strain C3 on Nematodes, J. Chen, W. H. Moore, Gary Yuen, D. Kobayashi, and E.P. Caswell-Chen

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DNA MOLECULES AND POLYPEPTIDES OF PSEUDOMONAS SYRINGAE HRP PATHOGENICITY ISLAND AND THEIR USES: U.S. Patent No. US 7,102,059 B2, Alan Collmer, James R. Alfano, and Amy O. Charkowski

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Assessing Heterodera glycines-Resistant and Susceptible Cultivar Yield Response, P. A. Donald; P. E. Pierson; S. K. St. Martin; P. R. Sellers; G. R. Noel; A. E. MacGuidwin; J. Faghihi; V. R. Ferris; C. R. Grau; D. J. Jardine; H, Melakeberhan; T. L. Niblack; W. C. Stienstra; G. L. Tylka; T. A. Wheeler; and D. S. Wysong

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Phycodnaviruses: A peek at genetic diversity, David Dunigan, Lisa Fitzgerald, and James L. Van Etten

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First Report of Leaf Spot of Smooth Bromegrass Caused by Pithomyces chartarum in Nebraska, C. Eken, C. C. Jochum, and G. Y. Yuen

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Whole-Genome Expression Profiling Defines the HrpL Regulon of Pseudomonas syringae pv. tomato DC3000, Allows de novo Reconstruction of the Hrp cis Element, and Identifies Novel Coregulated Genes, Adriana O. Ferreira, Christopher R. Myers, Jeffrey S. Gordon, Gregory B. Martin, Monica Vencato, Alan Collmer, Misty D. Wehling, James R. Alfano, Gabriel Moreno-Hagelsieb, Warren F. Lamboy, Geneviene DeClerck, David J. Schneider, and Samuel W. Cartinhour

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Potassium Ion Channels of Chlorella Viruses Cause Rapid Depolarization of Host Cells during Infection, Florian Frohns, Anja Kasmann, Detlef Kramer, Britta Schafer, Mario Mehmel, Ming Kang, James L. Van Etten, Sabrina Gazzarrini, Ana Morino, and Gerhard Thiel

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Association of Plant Color and Pericarp Color with Colonization of Grain by Members of Fusarium and Alternaria in Near-Isogenic Sorghum Lines, Deanna L. Funnell and Jeffrey F. Pedersen

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Reaction of Sorghum Lines Genetically Modified for Reduced Lignin Content to Infection by Fusarium and Alternaria spp., Deanna L. Funnell and Jeffrey F. Pedersen

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Interactions Between the Soybean Cyst Nematode and Fusarium solani f. sp. glycines Based on Greenhouse Factorial Experiments, X. Gao, T. A. Jackson, G. L. Hartman, and T. L. Niblack

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Inducible Yeast System for Viral RNA Recombination Reveals Requirement for an RNA Replication Signal on Both Parental RNAs, Hernan Garcia-Ruiz and Paul Ahlquist

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Polarity in Plants - Annual Plant Reviews, Volume 12, Steven D. Harris

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New Outbreaks of Bacterial Wilt of Dry Bean in Nebraska Observed from Field Infections, R. M. Harveson, H. F. Schwartz, A. K. Vidaver, Patricia A. Lambrecht, and K. L. Otto

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Fungicide Sensitivity of Sclerotinia homoeocarpa from Golf Courses in Ohio, Young-Ki Jo, Amy L. Niver, Joseph W. Rimelspach, and Michael J. Boehm

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Regulation of Hyphal Morphogenesis and the DNA Damage Response by the Aspergillus nidulans ATM Homolog AtmA, Iran Malavazi, Camile P. Semighini, Marcia Regina von Zeska Kress, Steven D. Harris, and Gustavo H. Goldman

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Transcriptome Analysis of Aspergillus nidulans Exposed to Camptothecin-Induced DNA Damage, Iran Malazavi, Marcela Savoldi, Sonia Marla Zingaretti Di Mauro, Carlos Frederico Martins Menck, Steven D. Harris, Maria Helena de Souza Goldman, and Gustavo Henrique Goldman

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Registration of ‘Atlas bmr-12’ Forage Sorghum, Jeffrey F. Pedersen, Deanna L. Funnell, John J. Toy, A.L. Oliver, and R.J. Grant

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Registration of Seven Forage Sorghum Genetic Stocks Near-Isogenic for the Brown Midrib Genes bmr-6 and bmr-12, Jeffrey F. Pedersen, Deanna L. Funnell, John J. Toy, A.L. Oliver, and R.J. Grant

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Registration of Twelve Grain Sorghum Genetic Stocks Near-isogenic for the Brown Midrib Genes bmr-6 and bmr-12, Jeffrey F. Pedersen, Deanna L. Funnell, John J. Toy, A.L. Oliver, and R.J. Grant

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Emended classification of xanthomonad pathogens on citrus, Norman W. Schaad, Elena Postnikova, George Lacy, Aaron Sechler, Irina V. Agarkova, Paul E. Stromberg, Verlyn K. Stromberg, and Anne K. Vidaver