The Department of Plant Pathology at the University of Nebraska-Lincoln (UNL) has a long tradition of excellence in research and service to the state,the nation, and internationally. Our mission is to provide solutions to plant disease and health issues, develop new knowledge of plant-pathogenic and plant-associated microorganisms, and provide quality, relevant education.

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2009

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The Majority of the Type III Effector Inventory of Pseudomonas syringae pv. tomato DC3000 Can Suppress Plant Immunity, Ming Guo, Fang Tian, Yashitola Wamboldt, and James R. Alfano

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Effects of increased pCO2 and temperature on the North Atlantic spring bloom. III. Dimethylsulfoniopropionate, Peter A. Lee, Jamie R. Rudisill, Aimee R. Neeley, Jennifer M. Maucher, David A. Hutchins, Yuanyuan Feng, Clinton E. Hare, Karine Leblanc, Julie M. Rose, Steven W. Wilhelm, Janet M. Rowe, and Giacomo R. DiTullio

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Education in Plant Pathology Present Status and Future Challenges, James MacDonald, Caitilyn Allen, David Gadoury, William Jacobi, Segenet Kelemu, James Moyer, Tim Murray, Kevin Ong, Charles Pearson, John Sherwood, and Ann Vidaver

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First Report of Columbia Root-Knot Nematode (Meloidogyne chitwoodi) in Potato in Turkey, A. Ozarslandan, Z. Devran, N. Mutlu, and I. H. Elekcioglu

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Rathayibacter iranicus isolated from symptomless wheat seeds in Turkey, E. Postnikova, Irina V. Agarkova, S. Altundag, F. Eskandari, A. Sechler, A. Karahan, A. K. Vidaver, W. Schneider, M. Ozakman, and N. W. Schaad

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A Nonsense Mutation in a Cinnamyl Alcohol Dehydrogenase Gene Is Responsible for the Sorghum brown midrib6 Phenotype1[W][OA], Scott E. Sattler, Aaron J. Saathoff, Eric J. Haas, Nathan A. Palmer, Deanna L. Funnell-Harris, Gautam Sarath, and Jeffrey F. Pedersen

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CHOLINE-UTILIZING MICROBLAL STRAINS FOR BIOLOGICALLY CONTROLLING FUSARIUM HEAD BLIGHT, David A. Schisler, Naseem I. Khan, Michael J. Boehm, and Patricia J. Slininger

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Characterization of the 5′- and 3′-Terminal Subgenomic RNAs Produced by a Capillovirus: Evidence for a CP Subgenomic RNA, Satyanarayana Tatineni, Mohammad R. Afunian, Siddarame Gowda, Mark E. Hilf, Moshe Bar-Joseph, and William O. Dawson

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Molecular Characterization of Citrus tatter leaf virus Historically Associated with Meyer Lemon Trees: Complete Genome Sequence and Development of Biologically Active In Vitro Transcripts, Satyanarayana Tatineni, Mohammad R. Afunian, Mark E. Hilf, Siddarame Gowda, William O. Dawson, and Stephen M. Garnsey

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Triticum mosaic virus: A Distinct Member of the Family Potyviridae with an Unusually Long Leader Sequence, Satyanarayana Tatineni, Amy D. Ziems, Stephen N. Wegulo, and Roy French

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Preface to Lesser Known Large dsDNA Viruses. Current Topics in Microbiology and Immunology 328, James L. Van Etten

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Dollar Spot Fungus Sclerotinla homoeocarpa Produces Oxalic Acid, R. C. Venu, Robert A. Beaulieu, Terrance L. Graham, Ainhoa Martinez Medina, and Michael J. Boehm

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Effect of Growth Stage on the Relationship Between Tan Spot and Spot Blotch Severity and Yield in Winter Wheat, Stephen N. Wegulo, Julie A. Breathnach, and P. Stephen Baenziger

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The Phycodnaviridae: The Story of How Tiny Giants Rule the World, W. H. Wilson, James L. Van Etten, and M. J. Allen

2008

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Comparison of Plant Growth-Promotion with Pseudomonas aeruginosa and Bacillus subtilis in Three Vegetables, A. O. Adesemoye, M. Obini, and E. O. Ugoji

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Enhanced Plant Nutrient Use Efficiency with PGPR and AMF in an Integrated Nutrient Management System, A. O. Adesemoye, H. A. Torbert, and J. W. Kloepper

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Chlorovirus-Mediated Membrane Depolarization of Chlorella Alters Secondary Active Transport of Solutes, Irina V. Agarkova, David Dunigan, James R. Gurnon, Timo Greiner, Julia Barres, Gerhard Thiel, and James L. Van Etten

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USES OF THE PSEUDOMONAS SYRINGAE EFFECTOR PROTEIN HOPU1 RELATED TO ITSABILITY TO ADP-RBOSYLATE EUKARYOTC RNA BINDING PROTENS, James R. Alfano, Zheng Qing Fu, and Thomas E. Elthon

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Transmembrane domain length of viral K+ channels is a signal for mitochondria targeting, Jorg Balss, Panagiotis Papatheodorou, Mario Mehmel, Dirk Baumeister, Brigitte Hertel, Nicolas Delaroque, Frank C. Chatelain, Daniel L. Minor Jr., James L. Van Etten, Joachim Rassow, Anna Moroni, and Gerhard Thiel

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An Immunofluorescence Assay to Detect Urediniospores of Phakopsora pachyrhizi, Fulya Baysal-Gurel, Melanie L. Lewis Ivey, Anne E. Dorrance, Douglas Luster, Reid Frederick, Jill Czarnecki, Michael J. Boehm, and Sally A. Miller

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Integrated Management Strategies for Phytophthora sojae Combining Host Resistance and Seed Treatments, A. E. Dorrance, A. E. Robertson, S. Cianzo, L. J. Giesler, C. R. Grau, M. A. Draper, A. U. Tenuta, and T. R. Anderson

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Putative Gene Promoter Sequences in the Chlorella Viruses, Lisa A. Fitzgerald, Philip Boucher, Giane Yanai-Balser, Karsten Suhre, Michael Graves, and James L. Van Etten

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Citrus Tristeza Virus: Survival at the Edge of the Movement Continuum, Svetlana Y. Folimonova, Alexey S. Folimonov, Satyanarayana Tatineni, and William O. Dawson

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Inoculation strategies to assess biological interactions between Fusarium and Alternaria species infecting sorghum, Deanna L. Funnell-Harris and Jeffrey F. Pedersen

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Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems, Steven D. Harris

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Virulence Diversity of the Common Bean Rust Pathogen Within and Among Individual Bean Fields and Development of Sampling Strategies, C. Jochua, M. I. V. Amane, J. R. Steadman, X. Xue, and K. M. Eskidge

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Rapid Development of Fungicide Resistance by Sclerotinia homoeocarpa on Turfgrass, Young-Ki Jo, Seog Won Chang, Michael J. Boehm, and Geunhwa Jung

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First Report of Annual Bluegrass Weevil, Listronotus maculicollis, Damage in Ohio, John L. Koenig, David J. Shetlar, Joseph W. Rimelspach, and Michael J. Boehm

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A DGGE-cloning method to characterize arbuscular mycorrhizal community structure in soil, Zhanbei Liang, Rhae A. Drijber, Donald J. Lee, Ismail M. Dwiekat, Steven D. Harris, and David A. Wedin

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An Antibiotic Complex from Lysobacter enzymogenes Strain C3: Antimicrobial Activity and Role in Plant Disease Control, S. Li, C. C. Jochum, F. Yu, K. Zaleta-Rivera, L. Du, Steven D. Harris, and Gary Y. Yuen

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METHOD FOR EFFICIENT POST TRANSCRIPTIONAL GENE SLENCING USING INTRINSIC DIRECT REPEAT SEQUENCES AND UTILIZATION THEREOF INFUNCTIONAL GENOMICS, Amitava Mitra and Chonglie Ma

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Epigenetic transcriptional repression of cellular genes by a viral SET protein, Shiraz Mujtaba, Karishma L. Manzur, James Gurnon, Ming Kang, James L. Van Etten, and Ming-Ming Zhou

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Differential Pathogenicity of Xanthomonas campestris pv. phaseoli and X. fuscans subsp. fuscans Strains on Bean Genotypes with Common Blight Resistance, N. Mutlu; A. K. Vidaver; D. P. Coyne; J. R. Steadman; P. A, Lambrecht; and J. Reiser

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Reclassification of Subspecies of Acidovorax avenae as A. Avenae (Manns 1905) emend., A. cattleyae (Pavarino, 1911)comb.nov., A. citrulli Schaad et al.,1978)comb.nov., and proposal of A. oryzae sp. nov., Norman Schaad, Elena Postnikova, Aaron Sechler, Larry E. Claflin, Anne K. Vidaver, Jeffrey B. Jones, Irina V. Agarkova, Alexander Ignatov, Ellen Dickstein, and Bruce A. Ramundo

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Myron Kendall Brakke: 1921 to 2007, Karen-Beth G. Scholthof, Andrew O. Jackson, and James L. Van Etten

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Regulation of Apical Dominance in Aspergillus nidulans Hyphae by Reactive Oxygen Species, Camile P. Semighini and Steven D. Harris

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Complete nucleotide sequence of a maize chlorotic mottle virus isolate from Nebraska, Drake Stenger and Roy C. French

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Three genes of Citrus tristeza virus are dispensable for infection and movement throughout some varieties of citrus trees, Satyanarayana Tatineni, Cecile J. Robertson, Stephen M. Garnsey, Moshe Bar-Joseph, Siddarame Gowda, and William O. Dawson

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In Planta Distribution of ‘Candidatus Liberibacter asiaticus’ as Revealed by Polymerase Chain Reaction (PCR) and Real-Time PCR, Satyanarayana Tatineni, Uma Shankar Sagaram, Siddarame Gowda, Cecile J. Robertson, William O. Dawson, Toru Iwanami, and Nian Wang

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First Report of Soybean Rust Caused by Phakopsora pachyrhizi in Nebraska, S. R. Watson, L. J. Giesler, A. D. Ziems, and T. E. Brovont

2007

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PSEUDOMONAS AVR AND HOP PROTEINS, THEIR ENCODING NUCLEIC ACIDS, AND USE THEREOF, James R. Alfano, Alan Collmer, Samuel W. Cartinhour, and David J. Schneider

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Association of ergot alkaloids with conidiation in Aspergillus fumigatus, Christine M. Coyle, Shawn C. Kenaley, William R. Rittenour, and Daniel G. Panaccione

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Functional characterization of the Aspergillus fumigatus calcineurin, Márcia Eliana da Silva Ferreira, Thorsten Heinekamp, Albert Hartl, Axel A. Brakhage, Camile P. Semighini, Steven D. Harris, Marcela Savoldi, Paula Fagundes de Gouvêa, Maria Helena de Souza Goldman, and Gustavo H. Goldman

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FREE-LIVING DORYLAIMID NEMATODES FROM NATURE RESERVES IN COSTA RICA. THE GENUS PACHYDORYLAIMUS SIDDIQI, 1983, A. Esquivel, P. Guerrero, R. Peña-Santiago, and Thomas O. Powers

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Sequence and annotation of the 288-kb ATCV-1 virus that infects an endosymbiotic chlorella strain of the heliozoon Acanthocystis turfacea, Lisa A. Fitzgerald, Michael V. Graves, Xiao Li, James Hartigan, Artur J.P. Pfitzner, Ella Hoffart, and James L. Van Etten

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Genetic Diversity in Populations of Xanthomonas campestris pv. campestris in Cruciferous Weeds in Central Coastal California, A. Ignatov, A. Sechler, E. L. Schuenzel, I. Agarkova, B. Oliver, A. K. Vidaver, and N. W. Schaad

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Genetic Diversity in Populations of Xanthomonas campestris pv. campestris in Cruciferous Weeds in Central Coastal California, A. Ignatov, A. Sechler, E. L. Schuenzel, Irina V. Agarkova, B. Oliver, A. K. Vidaver, and N. W. Schaad

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Expression Analysis of Rice Defense-Related Genes in Turfgrass in Response to Magnaporthe grisea, Young-Ki Jo, Guo-Liang Wang, and Michael J. Boehm

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basA Regulates Cell Wall Organization and Asexual/Sexual Sporulation Ratio in Aspergillus nidulans, Shaojie Li, Dapeng Bao, Gary Yuen, Steven D. Harris, and Ana M. Calvo

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SOYBEAN FGAM SYNTHASE PROMOTERS USEFUL IN NEMATODE CONTROL: U.S. Patent No. US 7,223,901 B2, Sally Ann MacKenzie and Zarir Vaghchhipawala

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Genetic analysis of a novel Alaska barley yellow dwarf virus in the family Luteoviridae, N.L. Robertson and Roy C. French

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Genetic structure in natural populations of barley/cereal yellow dwarf virus isolates from Alaska, N.L. Robertson and Roy C. French

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Wheat streak mosaic virus Lacking Helper Component-Proteinase Is Competent to Produce Disease Synergism in Double Infections with Maize chlorotic mottle virus, Drake C. Stenger, Brock A. Young, Feng Qu, Thomas Jack Morris, and Roy French

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Regulation of hyphal morphogenesis by cdc42 and rac1 homologues in Aspergillus nidulans, Aleksandra Virag, Maurice P. Lee, Haoyu Si, and Steven D. Harris

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Structure and Biosynthesis of Heat-Stable Antifungal Factor (HSAF), a Broad-Spectrum Antimycotic with a Novel Mode of Action, Fengan Yu, Kathia Zaleta-Rivera, Xiangcheng Zhu, Justin Huffman, Jeffrey C. Millet, Steven D. Harris, Gary Yuen, Xing-Cong Li, and Liangcheng Du

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Response of Soybean Cultivars to Bean pod mottle virus Infection, Amy D. Ziems, Loren J. Giesler, George L. Graef, Margaret G. Redinbaugh, Jean L. Vacha, SueAnn Berry, Laurence V. Madden, and Anne E. Dorrance

2006

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A Position Paper on the Electronic Publication of Nematode Taxonomic Manuscripts, Eyualem Abebe, James G. Baldwin, Byron Adams, Duane Hope, Scott Gardner, Robin Huettel, Peter Mullin, Thomas O. Powers, Jyotsna Sharma, Weimin Ye, and William K. Thomas

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Microbial Content of Abattoir Wastewater and Its Contaminated Soil in Lagos, Nigeria, A. O. Adesemoye, B. O. Opere, and S. C. O. Makinde

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Genetic Characterization and Diversity of Rathayibacter toxicus, Irina V. Agarkova, A. K. Vidaver, E. N. Postnikova, I. T. Riley, and N. W. Schaad

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Cloning of Nt.CviQII Nicking Endonuclease and Its Cognate Methyltransferase: M.CviQII Methylates AG Sequence, Siu-Hong Chan, Zhenyu Zhu, David Dunigan, James L. Van Etten, and Shuang-yong Xu

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Influence of Lysobacter enzymogenes Strain C3 on Nematodes, J. Chen, W. H. Moore, Gary Yuen, D. Kobayashi, and E.P. Caswell-Chen

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DNA MOLECULES AND POLYPEPTIDES OF PSEUDOMONAS SYRINGAE HRP PATHOGENICITY ISLAND AND THEIR USES: U.S. Patent No. US 7,102,059 B2, Alan Collmer, James R. Alfano, and Amy O. Charkowski

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NUCLEC ACDS ENCODING PSEUDOMONAS HOP PROTEINS AND USE THEREOF, Alan Collmer, James R. Alfano, Xiaoyan Tang, C. Robin Buell, and Gregory B. Martin

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Assessing Heterodera glycines-Resistant and Susceptible Cultivar Yield Response, P. A. Donald; P. E. Pierson; S. K. St. Martin; P. R. Sellers; G. R. Noel; A. E. MacGuidwin; J. Faghihi; V. R. Ferris; C. R. Grau; D. J. Jardine; H, Melakeberhan; T. L. Niblack; W. C. Stienstra; G. L. Tylka; T. A. Wheeler; and D. S. Wysong

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Phycodnaviruses: A peek at genetic diversity, David Dunigan, Lisa A. Fitzgerald, and James L. Van Etten

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First Report of Leaf Spot of Smooth Bromegrass Caused by Pithomyces chartarum in Nebraska, C. Eken, C. C. Jochum, and G. Y. Yuen

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Whole-Genome Expression Profiling Defines the HrpL Regulon of Pseudomonas syringae pv. tomato DC3000, Allows de novo Reconstruction of the Hrp cis Element, and Identifies Novel Coregulated Genes, Adriana O. Ferreira, Christopher R. Myers, Jeffrey S. Gordon, Gregory B. Martin, Monica Vencato, Alan Collmer, Misty D. Wehling, James R. Alfano, Gabriel Moreno-Hagelsieb, Warren F. Lamboy, Geneviene DeClerck, David J. Schneider, and Samuel W. Cartinhour

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Potassium Ion Channels of Chlorella Viruses Cause Rapid Depolarization of Host Cells during Infection, Florian Frohns, Anja Kasmann, Detlef Kramer, Britta Schafer, Mario Mehmel, Ming Kang, James L. Van Etten, Sabrina Gazzarrini, Ana Morino, and Gerhard Thiel

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Association of Plant Color and Pericarp Color with Colonization of Grain by Members of Fusarium and Alternaria in Near-Isogenic Sorghum Lines, Deanna L. Funnell and Jeffrey F. Pedersen

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Reaction of Sorghum Lines Genetically Modified for Reduced Lignin Content to Infection by Fusarium and Alternaria spp., Deanna L. Funnell and Jeffrey F. Pedersen

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Interactions Between the Soybean Cyst Nematode and Fusarium solani f. sp. glycines Based on Greenhouse Factorial Experiments, X. Gao, T. A. Jackson, G. L. Hartman, and T. L. Niblack

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Inducible Yeast System for Viral RNA Recombination Reveals Requirement for an RNA Replication Signal on Both Parental RNAs, Hernan Garcia-Ruiz and Paul Ahlquist

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Chlorella virus MT325 encodes water and potassium channels that interact synergistically, Sabrina Gazzarrini, Ming Kang, Svetlana Epimashko, James L. Van Etten, Jack Dainty, Gerhard Thiel, and Anna Moroni

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Polarity in Plants - Annual Plant Reviews, Volume 12, Steven D. Harris

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New Outbreaks of Bacterial Wilt of Dry Bean in Nebraska Observed from Field Infections, R. M. Harveson, H. F. Schwartz, A. K. Vidaver, Patricia A. Lambrecht, and K. L. Otto

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Fungicide Sensitivity of Sclerotinia homoeocarpa from Golf Courses in Ohio, Young-Ki Jo, Amy L. Niver, Joseph W. Rimelspach, and Michael J. Boehm

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Regulation of Hyphal Morphogenesis and the DNA Damage Response by the Aspergillus nidulans ATM Homolog AtmA, Iran Malavazi, Camile P. Semighini, Marcia Regina von Zeska Kress, Steven D. Harris, and Gustavo H. Goldman

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Transcriptome Analysis of Aspergillus nidulans Exposed to Camptothecin-Induced DNA Damage, Iran Malazavi, Marcela Savoldi, Sonia Marla Zingaretti Di Mauro, Carlos Frederico Martins Menck, Steven D. Harris, Maria Helena de Souza Goldman, and Gustavo Henrique Goldman

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Registration of ‘Atlas bmr-12’ Forage Sorghum, Jeffrey F. Pedersen, Deanna L. Funnell, John J. Toy, A.L. Oliver, and R.J. Grant

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Registration of Seven Forage Sorghum Genetic Stocks Near-Isogenic for the Brown Midrib Genes bmr-6 and bmr-12, Jeffrey F. Pedersen, Deanna L. Funnell, John J. Toy, A.L. Oliver, and R.J. Grant

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Registration of Twelve Grain Sorghum Genetic Stocks Near-isogenic for the Brown Midrib Genes bmr-6 and bmr-12, Jeffrey F. Pedersen, Deanna L. Funnell, John J. Toy, A.L. Oliver, and R.J. Grant

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Emended classification of xanthomonad pathogens on citrus, Norman W. Schaad, Elena Postnikova, George Lacy, Aaron Sechler, Irina V. Agarkova, Paul E. Stromberg, Verlyn K. Stromberg, and Anne K. Vidaver

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An Assessment Model for Rating High-Threat Crop Pathogens, N. W. Schaad, J. Abrams, L. V. Madden, R. D. Frederick, D. G. Luster, V. D. Damsteegt, and A. K. Vidaver

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BACILLUS SPECIES NRRL B-30212 FOR REDUCING FUSARIUM HEAD BLIGHT IN CEREALS, David A. Schisler, Naseem L. Khan, and Michael J. Boehm

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Farnesol-induced apoptosis in Aspergillus nidulans reveals a possible mechanism for antagonistic interactions between fungi, Camile P. Semighini, Jacob M. Hornby, Raluca Dumitru, Kenneth W. Nickerson, and Steven D. Harris

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Nested deletion analysis of Wheat streak mosaic virus HC-Pro: Mapping of domains affecting polyprotein processing and eriophyid mite transmission, Drake C. Stenger, Gary L. Hein, and Roy C. French

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Divergence and Mosaicism among Virulent Soil Phages of the Burkholderia cepacia Complex, Elizabeth J. Summer, Carlos F. Gonzalez, Morgan Bomer, Thomas Carlile, Addie Embry, Amalie M. Kucherka, Jonte Lee, Leslie Mebane, William C. Morrison, Louise Mark, Maria D. King, John J. LiPuma, Anne K. Vidaver, and Ry Young

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Avenacin Production in Creeping Bentgrass (Agrostis stolonifera) and Its Influence on the Host Range of Gaeumannomyces graminis, S. L. Thomas, P. Bonello, P. E. Lipps, and Michael J. Boehm

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Sentinel Nematodes of Land-Use Change and Restoration in Tallgrass Prairie, T. C. Todd, T. O. Powers, and P.G. Mullin

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Bioinformatics-Enabled Identification of the HrpL Regulon and Type III Secretion System Effector Proteins of Pseudomonas syringae pv. phaseolicola 1448A, Monica Vencato, Fang Tian, James R. Alfano, C. Robin Buell, Samuel Cartinhour, Genevieve A. DeClerck, David S. Guttman, John Stavrinides, Vinita Joardar, Magdalen Lindeberg, Philip A. Bronstein, John W. Mansfield, Christopher R. Myers, Alan Collmer, and David J. Schneider

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Functional Characterization of Aspergillus nidulans Homologues of Saccharomyces cerevisiae Spa2 and Bud6, Aleksandra Virag and Steven D. Harris

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Chlorella Viruses, Takashi Yamada, Hideki Onimatsu, and James L. Van Etten

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Carbon-to-Nitrogen Ratio and Carbon Loading of Production Media Influence Freeze-Drying Survival and Biocontrol Efficacy of Cryptococcus nodaensis OH 182.9, Shouan Zhang, David A. Schisler, Michael J. Boehm, and Patricia J. Slininger

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First Report of Sudden Death Syndrome of Soybean Caused by Fusarium solani f. sp. glycines in Nebraska, A. D. Ziems, L. J. Giesler, and G. Y. Yuen

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First Report of Sudden Death Syndrome of Soybean Caused by Fusarium solani f. sp. glycines in Nebraska, A. D. Ziems, L. J. Giesler, and G. Y. Yuen

2005

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Genetic and Phenotypic Variation of the Pepper golden mosaic virus Complex, J. K. Brown, A. M. Idris, K. M. Ostrow, N. Goldberg, R. French, and D. C. Stenger

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Proline suppresses apoptosis in the fungal pathogen Colletotrichum trifolii, Changbin Chen and Martin B. Dickman

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DNA MOLECULES AND POLYPEPTIDES OF PSEUDOMONAS SIRINGAE HRP PATHOGENICITY ISLAND AND THEIR USES: U.S. Patent No. US 6,852,835 B2, Alan Collmer, James R. Alfano, and Amy O. Charkowski

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Chlorella Virus Marburg Topoisomerase II: High DNA Cleavage Activity as a Characteristic of Chlorella Virus Type II Enzymes, Jennifer S. Dickey, Tae-Jin Choi, James L. Van Etten, and Neil Osheroff

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First Report of Crown and Stem Rot of Orchid (Orchis palustris) Caused by Sclerotinia minor, C. Eken, S. Ercişli, A. Eşitken, E. Demirci, and G. Y. Yuen