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2020

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Insights from the Inclusive Environments and Metrics in Biology Education and Research Network: Our Experience Organizing Inclusive Biology Education Research Events, Rebecca A. Campbell-Montalvo, Natalia Caporale, Gary S. McDowell, Candice Idlebird, Katie M. Wiens, Kimberly M. Jackson, Jana D. Marcette, and Michael E. Moore

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Healthy pregnancies and essential fats: focus group discussions with Zambian women on dietary need and acceptability of a novel RUSF containing fish oil DHA, Catherine Chunda-Liyoka, Mwansa Ketty Lubeya, Mercy Imakando, Sophia Kisling, Sonoor Majid, Mary Willis, Charles Wood, Chipepo Kankasa, and Concetta C. DiRusso

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Role of the Hyaluronan Receptor, Stabilin-2/HARE, in Health and Disease, Edward N. Harris and Erika Baker

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Connecting Theory to Practice: Using Self-Determination Theory To Better Understand Inclusion in STEM, Michael E. Moore, Dulce M. Vega, Katie M. Wiens, and Natalia Caporale

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Transcriptome analysis-identified long noncoding RNA CRNDE in maintaining endothelial cell proliferation, migration, and tube formation, Matthew Moran, Xiao Cheng Zeng, Mohamed Sham Shihabudeen Haider Ali, Nishikant Wase, Nghi Nguyen, Weilong Yang, Chi Zhang, Concetta C. DiRusso, and Xinghui Sun

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From Synthesis to Utilization: The Ins and Outs of Mitochondrial Heme, Samantha A. Swenson, Courtney M. Moore, Jason R. Marcero, Amy E. Medlock, Amit R. Reddi, and Oleh Khalimonchuk

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The genome evolution and domestication of tropical fruit mango, Peng Wang, Yingfeng Luo, Jianfeng Huang, Shenghan Gao, Guopeng Zhu, Zhiguo Dang, Jiangtao Gai, Meng Yang, Min Zhu, Huangkai Zhang, Xiuxu Ye, Aiping Gao, Xinyu Tan, Sen Wang, Shuangyang Wu, Edgar B. Cahoon, Beibei Bai, Zhichang Zhao, Qian Li, Junya Wei, Huarui Chen, Ruixiong Luo, Deyong Gong, Kexuan Tang, Bing Zhang, Zhangguang Ni, Guodi Huang, Songnian Hu, and Yeyuan Chen

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Systematic age-, organ-, and diet-associated ionome remodeling and the development of ionomic aging clocks, Bohan Zhang, Dmitriy I. Podolskiy, Marco Mariotti, Javier Seravalli, and Vadim N. Gladyshev

2019

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An Arabidopsis protoplast isolation method reduces cytosolic acidification and activation of the chloroplast stress sensor SENSITIVE TO FREEZING 2, Allison C. Barnes, Christian G. Elowsky, and Rebecca Roston

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ACYLTRANSFERASES AND METHODS OF USING, Edgar Cahoon, Umidjon Iskandarov, Hae Jin Kim, and Jillian Collins-Silva

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Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential, Lindsay V. Clark, Maria S. Dwiyanti, Kossonou G. Anzoua, Joe E. Brummer, Bimal Kumar Ghimire, Katarzyna Glowacka, Megan Hall, Kweon Heo, Xiaoli Jin, Alexander E. Lipka, Junhua Peng, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, and Erik J. Sacks

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Genome‐wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America, Lindsay V. Clark, Maria S. Dwiyanti, Kossonou G. Anzoua, Joe E. Brummer, Bimal Kumar Ghimire, Katarzyna Glowacka, Megan Hall, Kweon Heo, Xiaoli Jin, Alexander E. Lipka, Junhua Peng, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, and Erik J. Sacks

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Winter hardiness of Miscanthus (III): Genome‐wide association and genomic prediction for overwintering ability in Miscanthus sinensis, Hongxu Dong, Lindsay V. Clark, Alexander E. Lipka, Joe E. Brummer, Katarzyna Glowacka, Megan C. Hall, Kweon Heo, Xiaoli Jin, Junhua Peng, Toshihiko Yamada, Bimal Kumar Ghimire, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, and Erik J. Sacks

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Ligand Binding and Signaling of HARE/Stabilin-2, Edward N. Harris and Fatima Cabral

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Reintegrating Biology Through the Nexus of Information and Energy, Kim L. Hoke, Sara L. Zimmer, Mary Jo Ondrechen, Amedee des Georges, Adam B. Roddy, Nicole R. Buan, and Craig E. Williamson

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Student Understanding of DNA Structure–Function Relationships Improves from Using 3D Learning Modules with Dynamic 3D Printed Models, Michelle E. Howell, Christine S. Booth, Sharmin M. Sikich, Tomáš Helikar, Rebecca Roston, Brain A. Couch, and Karin van Dijk

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Visualizing the Invisible: A Guide to Designing, Printing, and Incorporating Dynamic 3D Molecular Models to Teach Structure–Function Relationships, Michelle Howell, Karin van Dijk, Christine S. Booth, Tomáš Helikar, Brain A. Couch, and Rebecca Roston

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Comparison of montage with conventional stereoscopic seven‑field photographs for assessment of ETDRS diabetic retinopathy severity, Nam V. Nguyen, Erin M. Vigil, Muhammad Hassan, Muhammad S. Halim, Sean C. Baluyot, Hugo A. Guzman, Rubbia Afridi, Diana V. Do, and Yasir J. Sepah

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DNA Uptake by Type IV Filaments, Kurt H. Piepenbrink

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Downregulation of a CYP74 Rubber Particle Protein Increases Natural Rubber Production in Parthenium argentatum, Dante F. Placido, Niu Dong, Chen Dong, Von Mark V. Cruz, David A. Dierig, Rebecca E. Cahoon, Byung-guk Kang, Trinh Huynh, Maureen Whalen, Grisel Ponciano, and Colleen McMahan

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Chronic alcohol exposure alters circulating insulin and ghrelin levels: role of ghrelin in hepatic steatosis, Karuna Rasineni, Paul G. Thomes, Jacy L. Kubik, Edward N. Harris, Kusum K. Kharbanda, and Carol A. Casey

Autophagy in Adipocyte Browning: Emerging Drug Target for Intervention in Obesity, Seung-Hyun Ro, Yura Jang, Jiyoung Bae, Isaac M. Kim, Cameron Schaecher, and Zachery D. Shomo

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Autophagy in Adipocyte Browning: Emerging Drug Target for Intervention in Obesity, Seung-Hyun Ro, Yura Jang, Jiyoung Bae, Isaac M. Kim, Cameron Schaecher, and Zachery D. Shomo

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The mitochondrial NAD+ transporter (NDT1) plays important roles in cellular NAD+ homeostasis in Arabidopsis thaliana, Izabel de Souza Chaves, Elias Feitosa-Araujo, Alexandra Florian, David B. Medeiros, Paula da Fonseca-Pereira, Lennart Charton, Elmien Heyneke, Jorge A. C. Apfata, Marcel V. Pires, Tabea Mettler-Altmann, Wagner L. Arajuo, H. Ekkehard Neuhaus, Ferdinando Palmieri, Toshihiro Obata, Andreas P. M. Weber, Nicole Linka, Alisdair R. Femie, and Adriano Nunes-Nesi

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High-Throughput Nano-Scale Characterization of Membrane Proteins Using Fluorescence-Detection Size-Exclusion Chromatography, Alex J. Vecchio and Robert M. Stroud

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Fatty acid transporter 2 reprograms neutrophils in cancer, Filippo Veglia; Vladimir A. Tyurin; Maria Blasi; Alessandra De Leo; Andrew Kossenkov; Laxminarasimha Donthireddy; To Tsun Ki Jerrick; Zach Schug; Subhasree Basu; Fang Wang; Emanuela Ricciotti; Concetta C. DiRusso; Maureen E. Murphy; Robert H. Vonderheide; Paul M. Lieberman; Charles Mulligan; Brian Nam; Neil Hockstein; Gregory Masters; Michael Guarino; Cindy Lin; Yulia Nefedova; Paul N. Black; Valerian E, Kagan; and Dmitry Gabrilovich

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Structural basis of non-canonical transcriptional regulation by the A-bound iron-sulfur protein WhiB1 in M. tuberculosis, Tao Wan, Shanren Li, Daisy Guiza Beltran, Andrew Schacht, Lu Zhang, Donald F. Becker, and Limei Zhang

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Remodeling of Chlamydomonas Metabolism Using Synthetic Inducers Results in Lipid Storage during Growth, Nishikant Wase, Boqiang Tu, Girish Kumar Rasineni, Ronald Cerny, Ryan Grove, Jiri Adamec, Paul N. Black, and Concetta DiRusso

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Charting a new frontier of science by integrating mathematical modeling to understand and predict complex biological systems, Katharine White, Kira McEntire, Nicole R. Buan, Kingshuk Ghosh, Lecia Robinson, and Elisar Barbar

2018

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Induction of oil accumulation by heat stress is metabolically distinct from N stress in the green microalgae Coccomyxa subellipsoidea C169, James W. Allen, Rahul Tevatia, Yaşar Demirel, Concetta C. DiRusso, and Paul N. Black

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Single-Molecule Unbinding Forces between the Polysaccharide Hyaluronan and Its Binding Proteins, Fouzia Bano, Markku I. Tammi, David W. Kang, Edward N. Harris, and Ralf P. Richter

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Towards the synthetic design of camelina oil enriched in tailored acetyl-triacylglycerols with medium-chain fatty acids, Sunil Bansal, Hae Jin Kim, GunNam Na, Megan E. Hamilton, Edgar B. Cahoon, Chaofu Lu, and Timothy P. Durrett

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Simulation of Stimulation: Cytokine Dosage and Cell Cycle Crosstalk Driving Timing-Dependent T Cell Differentiation, Matteo Barberis, Tomáš Helikar, and Paul Verbruggen

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Combining Mass Spectrometry and NMR Improves Metabolite Detection and Annotation, Fatema Bhinderwala, Nishikant Wase, Concetta DiRusso, and Robert Powers

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Reactive Oxygen Species in Chronic Obstructive Pulmonary Disease, Samia Boukhenouna, Mark A. Wilson, Karim Bahmed, and Beata Kosmider

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Methanogens: pushing the boundaries of biology, Nicole R. Buan

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Identification of Genes Encoding Enzymes Catalyzing the Early Steps of Carrot Polyacetylene Biosynthesis, Lucas Busta, Won Cheol Yim, Evan William LaBrant, Peng Wang, Lindsey Grimes, Kiah Malyszka, John C. Cushman, Patricia Santos, Dylan K. Kosma, and Edgar B. Cahoon

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Purification of Hepatocytes and Sinusoidal Endothelial Cells from Mouse Liver Perfusion, Fatima Cabral, Colton M. Miller, Katrina M. Kudrna, Blake E. Hass, Jocelyn G. Daubendiek, Brianna M. Kellar, and Edward N. Harris

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Total Mercury Determination in Muscle and Liver Tissue Samples from Brazilian Amazon Fish Using Slurry Sampling, João Vitor de Queiroz, José Cavalcante Souza Vieira, Izabela da Cunha Bataglioli, Alis Correia Bittarello, Camila Pereira Braga, Grasieli de Oliveira, Cilene do Carmo Federici Padilha, and Pedro de Magalhães Padilha

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Structural Determinants for the Interactions of Chemically Modified Nucleic Acids with the Stabilin‑2 Clearance Receptor, Hans Gaus, Colton M. Miller, Punit P. Seth, and Edward N. Harris

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Photosystem II Subunit S overexpression increases the efficiency of water use in a field-grown crop, Katarzyna Glowacka, Johannes Kromdijk, Katherine Kucera, Jiayang Xie, Amanda P. Cavanagh, Lauriebeth Leonelli, Andrew D. B. Leakey, Donald R. Ort, Krishna K. Niyogi, and Stephen P. Long

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Visualizing the Invisible: A Guide to Designing, Printing, and Incorporating Dynamic 3D Molecular Models to Teach Structure–Function Relationships, Michelle E. Howell, Karin V. van Dijk, Christine S. Booth, Tomáš Helikar, Brian A. Couch, and Rebecca Roston

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Characterization of a recurrent missense mutation in the forkhead DNA-binding domain of FOXP1, Tyler B. Johnson, Keegan Mechels, Ruth Ellen Anderson, Jacob T. Cain, David A. Sturdevant, Stephen Braddock, Hailey Pinz, Mark A. Wilson, Megan Landsverk, Kyle J. Roux, and Jill M. Weimer

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Dietary Omega-3 and Omega-6 Polyunsaturated Fatty Acids Modulate Hepatic Pathology, Saraswoti Khadge, J. Graham Sharp, Geoffrey M. Thiele, Timothy R. McGuire, Lynell W. Klassen, Michael J. Duryee, Holly C. Britton, Jordan Beck, Paul N. Black, Concetta DiRusso, and James Talmadge

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Long-Chain Omega-3 Polyunsaturated Fatty Acids Modulate Mammary Gland Composition and Inflammation, Saraswoti Khadge, Geoffrey M. Thiele, J. Graham Sharp, Timothy R. McGuire, Lynell W. Klassen, Paul N. Black, Concetta DiRusso, and James Talmadge

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Structural Basis for the Substrate Inhibition of Proline Utilization A by Proline, David A. Korasick, Travis A. Pemberton, Benjamin W. Arentson, Donald F. Becker, and John J. Tanner

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Lipid transport required to make lipids of photosynthetic membranes, Evan LaBrant, Allison C. Barnes, and Rebecca Roston

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REVERSIBLE HEPARIN MOLECULES AND METHODS OF MAKING AND USING THE SAME, Jian Liu, Yongmei Xu, Robert J. Linhardt, and Edward Harris

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Endosomal Escape of Antisense Oligonucleotides Internalized by Stabilin Receptors Is Regulated by Rab5C and EEA1 During Endosomal Maturation, Colton M. Miller, W. Brad Wan, Punit P. Seth, and Edward N. Harris

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3-O sulfation of heparin leads to hepatotropism and longer circulatory half-life, Colton M. Miller, Yongmei Xu, Katrina M. Kudrna, Blake E. Hass, Brianna M. Kellar, Andrew W. Egger, Jian Liu, and Edward N. Harris

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CancerDiscover: an integrative pipeline for cancer biomarker and cancer class prediction from high-throughput sequencing data, Akram Mohammed, Greyson Biegert, Jiri Adamec, and Tomáš Helikar

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The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks, Aurelien Naldi, Celine Hernandez, Nicolas Levy, Gautier Stoll, Pedro T. Monteiro, Claudine Chaouiya, Tomáš Helikar, Andrei Zinovyev, Laurence Calzone, Sarah Cohen-Boulakia, Denis Thieffry, and Loic Pauleve

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Identification of Biologically Essential Nodes via Determinative Power in Logical Models of Cellular Processes, Trevor Pentzien, Bhanwar L. Puniya, Tomas Helikar, and Mihaela T. Matache

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Mouse genome-wide association studies and systems genetics uncover the genetic architecture associated with hepatic pharmacokinetic and pharmacodynamic properties of a constrained ethyl antisense oligonucleotide targeting Malat1, Elaine Pirie, Shayoni Ray, Calvin Pan, Wuxia Fu, Andrew F. Powers, Danielle Polikoff, Colton M. Miller, Katrina M. Kudrna, Edward N. Harris, Aldons J. Lusis, Rosanne M. Crooke, and Richard G. Lee

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A Mechanistic Computational Model Reveals That Plasticity of CD4+ T Cell Differentiation Is a Function of Cytokine Composition and Dosage, Bhanwar Lal Puniya, Robert G. Todd, Akram Mohammed, Deborah M. Brown, Matteo Barberis, and Tomáš Helikar

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Editorial: Structure and Function of Chloroplasts, Rebecca L. Roston, Juliette Jouhet, Fei Yu, and Hongbo Gao

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Intraperitoneal Nanotherapy for Metastatic Ovarian Cancer Based on siRNA-Mediated Suppression of DJ-1 Protein Combined with a Low Dose of Cisplatin, Canan Schumann, Stephanie Chan, Jess A. Miller, Yuliya Bortnyak, Katherine Carey, Alex Fedchyk, Leon Wong, Tetiana Korzun, Abraham S. Moses, Anna Lorenz, Delany Shea, Olena Taratula, Oleh Khalimonchuk, and Oleh Taratula

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LncRNA Meg3 protects endothelial function by regulating the DNA damage response, Mohamed Sham Shihabudeen Haider Ali, Xiao Cheng, Matthew Moran, Stefan Haemmig, Michael J. Naldrett, Sophie Alvarez, Mark W. Feinberg, and Xinghui Sun

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Computational Systems Biology Approach for the Study of Rheumatoid Arthritis: From a Molecular Map to a Dynamical Model, Vidisha Singh, Marek Ostaszewski, George D. Kalliolias, Gilles Chiocchia, Robert Olaso, Elisabeth Petit-Teixeira, Tomáš Helikar, and Anna Niarakis

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A TLR/AKT/FoxO3 immune tolerance–like pathway disrupts the repair capacity of oligodendrocyte progenitors, Taasin Srivastava, Parham Diba, Justin M. Dean, Fatima Banine, Daniel Shaver, Matthew Hagen, Xi Gong, Weiping Su, Ben Emery, Daniel L. Marks, Edward N. Harris, Bruce Baggentoss, Paul H. Weigel, Larry S. Sherman, and Stephen A. Back

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Role of Selenof as a Gatekeeper of Secreted Disulfide-Rich Glycoproteins, Sun Hee Yim, Robert A. Everley, Frank A. Schildberg, Sang-Goo Lee, Andrea Orsi, Zachary R. Barbati, Kutay Karatepe, Dmitry E. Fomenko, Petra A. Tsuji, Hongbo R. Luo, Steven P. Gygi, Roberto Sitia, Arlene H. Sharpe, Dolph L. Hatfield, and Vadim N. Gladyshev

2017

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Carbon and Acyl Chain Flux during Stress-induced Triglyceride Accumulation by Stable Isotopic Labeling of the Polar Microalga Coccomyxa subellipsoidea C169, James W. Allen, Concetta C. DiRusso, and Paul N. Black

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Quantification of Cell Signaling Networks Using Kinase Activity Chemosensors, Jon R. Beck, Edward N. Harris, and Cliff I. Stains

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Oxidative stress, metabolomics profiling, and mechanism of local anesthetic induced cell death in yeast, Cory Honsinger Thomas Boone, Ryan A. Grove, Dana Adamcova, Javier Seravalli, and Jiri Adamec

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BioSIMP: Using Software Testing Techniques for Sampling and Inference in Biological Organisms, Mikaela Cashman, Jennie L. Catlett, Myra B. Cohen, Nicole R. Buan, Zahmeeth Sakkaff, Massimiliano Pierobon, and Christine A. Kelley

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Toxoplasma DJ-1 Regulates Organelle Secretion by a Direct Interaction with Calcium-Dependent Protein Kinase 1, Matthew A. Child, Megan Garland, Ian Foe, Peter Madzelan, Moritz Treeck, Wouter A. van der Linden, Kristina Oresic Bender, Evanthie Weerapana, Mark A. Wilson, John C. Boothroyd, and Michael L. Reese

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Organ-specific regulation of ATP7A abundance is coordinated with systemic copper homeostasis, Haarin Chun, Tracy Catterson, Heejeong Kim, Jaekwon Lee, and Byung-Eun Kim

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Physiological Evidence for Isopotential Tunneling in the Electron Transport Chain of Methane-Producing Archaea, Nikolas Duszenko and Nicole R. Buan

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Significant enhancement of fatty acid composition in seeds of the allohexaploid, Camelina sativa, using CRISPR/Cas9 gene editing, Wen Zhi Jhang, Isabelle M. Henry, Peter G. Lynagh, Lucia Comai, Edgar B. Cahoon, and Donald P. Weeks

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Metalloproteases of the inner mitochondrial membrane, Roman M. Levytskyy, Iryna Bohovych, and Oleh Khalimonchuk

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Short Carboxylic Acid-Carboxylate Hydrogen Bonds Can Have Fully Localized Protons, Jiusheng Lin, Edwin Pozharski, and Mark A. Wilson

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Gene duplication and neo-functionalization in the evolutionary and functional divergence of the metazoan copper transporters Ctr1 and Ctr2, Brandon L. Logeman, L. Kent Wood, Jaekwoon Lee, and Dennis J. Thiele

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Identification of potential tissue-specific cancer biomarkers and development of cancer versus normal genomic classifiers, Akram Mohammed, Greyson Biegert, Jiri Adamec, and Tomáš Helikar

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SECs (Sinusoidal Endothelial Cells), Liver Microenvironment, and Fibrosis, Vaishaali Natarajan, Edward N. Harris, and Srivatsan Kidambi

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Metabolic Investigations of the Molecular Mechanisms Associated with Parkinson’s Disease, Robert Powers, Shulei Lei, Annadurai Anandhan, Darrell D. Marshall, Bradley Worley, Ronald Cerny, Eric D. Dodds, Yuting Huang, Mihalis I. Panayiotidis, Aglaia Pappa, and Rodrigo Franco

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End-to-end Molecular Communication Channels in Cell Metabolism: an Information Theoretic Study, Zahmeeth Sakkaff, Massimiliano Pierobon, Jennie L. Catlett, Nicole R. Buan, Christine A. Kelley, Mikaela Cashman, and Myra B. Cohen

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End-to-end Molecular Communication Channels in Cell Metabolism: an Information Theoretic Study, Zahmeeth Sayed Sakkaff, Jennie L. Catlett, Mikaela Cashman, Massimiliano Pierobon, Nicole R. Buan, Myra B. Cohen, and Christine A. Kelley

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pNEB193-derived suicide plasmids for gene deletion and protein expression in the methane-producing archaeon, Methanosarcina acetivorans, Mitchell T. Shea, Mary E. Walter, Nikolas Duszenko, Anne-Lise Ducluzeau, Jared Aldridge, Shannon K. King, and Nicole R. Buan

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Seasonal switchgrass ecotype contributions to soil organic carbon, deep soil microbial community composition and rhizodeposit uptake during an extreme drought, Catherine E. Stewart, Damaris Roosendaal, Karolien Denef, Elizabeth Pruessner, Louise H. Comas, Gautam Sarath, Virginia L. Jin, Marty R. Schmer, and Madhavan Soundararajan

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The role of interactions of long non-coding RNAs and heterogeneous nuclear ribonucleoproteins in regulating cellular functions, Xinghui Sun, Mohamed Sham Shihabudeen Haider Ali, and Matthew Moran

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The Assembly Factor Pet117 Couples Heme a Synthase Activity to Cytochrome Oxidase Assembly, Nicholas G. Taylor, Samantha Swenson, Nicholas J. Harris, Edward M. Germany, Jennifer L. Fox, and Oleh Khalimonchuk

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Mitochondrial Reactive Oxygen Species in Lipotoxic Hearts Induces Post-Translational Modifications of AKAP121, DRP1 and OPA1 That Promote Mitochondrial Fission, Kensuke Tsushima, Heiko Bugger, Adam R. Wende, Jamie Soto, Gregory A. Jenson, Austin R. Tor, Rose McGlauflin, Helena C. Kenny, Yuan Zhang, Rhonda Souvenir, Xiao X. Hu, Crystal L. Sloan, Renata O. Pereira, Vitor A. Lira, Kenneth W. Spitzer, Terry L. Sharp, Kooresh I. Shoghi, Genevieve C. Sparagna, Eva A. Rog-Zielinska, Peter Kohl, Oleh Khalimonchuk, Jean E. Schaffer, and E. Dale Abel

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Structural and Mechanistic Insights into Hemoglobincatalyzed Hydrogen Sulfide Oxidation and the Fate of Polysulfide Products, Victor Vitvitsky, Pramod K. Yadav, Sojin An, Javier Seravalli, Uhn-Soo Cho, and Ruma V. Banerjee

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Identification and Metabolite Profiling of Chemical Activators of Lipid Accumulation in Green Algae, Nishikant Wase, Boqiang Tu, James Allen, Paul N. Black, and Concetta DiRusso

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Ydj1 governs fungal morphogenesis and stress response, and facilitates mitochondrial protein import via Mas1 and Mas2, Jinglin L. Xie, Iryna Bohovych, Erin O.Y. Wong, Jean-Philippe Lambert, Anne-Claude Gingras, Oleh Khalimonchuk, Leah E. Cowen, and Michelle D. Leach

2016

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Logical Modeling and Dynamical Analysis of Cellular Networks, Wassim Abou-Jaoudé, Pauline Traynard, Pedro T. Monteiro, Julio Saez-Rodriguez, Tomáš Helikar, Denis Thieffry, and Claudine Chaouiya

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Methods for Detecting Microbial Methane Production and Consumption by Gas Chromatography, Jared T. Aldridge, Jennie L. Catlett, Megan L. Smith, and Nicole R. Buan

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Engineering a trifunctional proline utilization A chimaera by fusing a DNA-binding domain to a bifunctional PutA, Benjamin W. Arentson, Erin L. Hayes, Weidong Zhu, John J. Tanner, and Donald F. Becker

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Chloroplast membrane remodeling during freezing stress is accompanied by cytoplasmic acidification activating SENSITIVE TO FREEZING 2, Allison C. Barnes, Christoph Benning, and Rebecca Roston

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Fatty acid transport proteins: targeting FATP2 as a gatekeeper involved in the transport of exogenous fatty acids, Paul N. Black, Constance Ahowesso, David Montefusco, Nipun Saini, and Concetta C. DiRusso

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Oma1 Links Mitochondrial Protein Quality Control and TOR Signaling To Modulate Physiological Plasticity and Cellular Stress Responses, Iryna Bohovych, Stavroula Kastora, Sara Christianson, Danelle Topil, Heejeong Kim, Teresa Fangman, You J. Zhou, Antoni Barrientos, Jaekwon Lee, Alistair J.P. Brown, and Oleh Khalimonchuk

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Sending Out an SOS: Mitochondria as a Signaling Hub, Iryna Bohovych and Oleh Khalimonchuk

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NOVEL ACYLTRANSERASES AND METHODS OF USING, Edgar B. Cahoon, Umidjon Iskandarov, Hae Jin Kim, and Jillian Collins-Silva

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The Intestinal Copper Exporter CUA-1 Is Required for Systemic Copper Homeostasis in Caenorhabditis elegans, Haarin Chun, Anuj Kumar Sharma, Jaekwon Lee, Jefferson Chan, Shang Jia, and Byung-Eun Kim

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Polyglycine Acts as a Rejection Signal for Protein Transport at the Chloroplast Envelope, Joshua K. Endow, Agostinho Gomes Rocha, Amy J. Baldwin, Rebecca L. Roston, Toshio Yamaguchi, Hironari Kamikubo, and Kentaro Inoue

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Role of apoptotic hepatocytes in HCV dissemination: regulation by acetaldehyde, Murali Ganesan, Sathish Kumar Natarajan, Jinjin Zhang, Justin L. Mott, Larisa I. Poluektova, Benita L. McVicker, Kusum K. Kharbanda, Dean J. Tuma, and Natalie A. Osna

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Can chilling tolerance of C4 photosynthesis in Miscanthus be transferred to sugarcane?, Katarzyna Glowacka, Aasifuddin Ahmed, Shailendra Sharma, Tom Abbott, Jack C. Comstock, Stephen P. Long, and Erik J. Sacks

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An evaluation of new and established methods to determine T-DNA copy number and homozygosity in transgenic plants, Katarzyna Glowacka, Johannes Kromdijk, Lauriebeth Leonelli, Krishna K. Niyogi, Tom E. Clemente, and Stephen P. Long

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Inhibiting hexamer disassembly of human UDP-glucose dehydrogenase by photoactivated amino acid crosslinking, George Grady, Ashley Thelen, Jaleen Albers, Tong Ju, Jiantao Guo, Joseph J. Barycki, and Melanie A. Simpson

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Regulation of DJ-1 by glutaredoxin 1 in vivo – implications for Parkinson’s disease, William M. Johnson, Marcin Golczak, Kyonghwan Choe, Pierce L. Curran, Olga Gorelenkova Miller, Chen Yao, Wenzhang Wang, Jiusheng Lin, Nicole M. Milkovic, Ajit Ray, Vijayalakshmi Ravindranath, Xiongwei Zhu, Mark A. Wilson, Amy L. Wilson-Delfosse, Shu G. Chen, and John J. Mieyal