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2015

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Phenotypic screening identifies Brefeldin A/Ascotoxin as an inducer of lipid storage in the algae Chlamydomonas reinhardtii, Nishikant Wase, Boqiang Tu, Paul N. Black, and Concetta C. DiRusso

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Use of designer nucleases for targeted gene and genome editing in plants, Donald P. Weeks, Martin H. Spalding, and Bing Yang

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Overaccumulation of γ-Glutamylcysteine in a Jasmonate-Hypersensitive Arabidopsis Mutant Causes Jasmonate-Dependent Growth Inhibition, Hsin-Ho Wei, Martha Rowe, Jean-Jack M. Riethoven, Ryan Grove, Jiri Adamec, Yusuke Jikumaru, and Paul E. Staswick

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Proline Metabolism Increases katG Expression and Oxidative Stress Resistance in Escherichia coli, Lu Zhang, James R. Alfano, and Donald F. Becker

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Connecting proline metabolism and signaling pathways in plant senescence, Lu Zhang and Donald F. Becker

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A Multilaboratory Comparison of Calibration Accuracy and the Performance of External References in Analytical Ultracentrifugation, Huaying Zhao, Rodolfo Ghirlando, Carlos Alfonso, Fumio Arisaka, Ilan Attali, David L. Bain, et al. ..., Donald F. Becker, and Peter Schuck

2014

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Kinetic and Structural Characterization of Tunnel-Perturbing Mutants in Bradyrhizobium japonicum Proline Utilization A, Benjamin W. Arentson, Min Luo, Travis A. Pemberton, John J. Tanner, and Donald F. Becker

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Stress-triggered Activation of the Metalloprotease Oma1 Involves Its C-terminal Region and Is Important for Mitochondrial Stress Protection in Yeast, Iryna Bohovych, Garrett Donaldson, Sara Christianson, Nataliya Zahayko, and Oleh Khalimonchuk

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Stress adaptation in a pathogenic fungus, Alistair J. P. Brown, Susan Budge, Despoina Kaloriti, Anna Tillmann, Mette D. Jacobsen, Zhikang Yin, Iuliana V. Ene, Iryna Bohovych, Doblin Sandai, Stavroula Kastora, Joanna Potrykus, Elizabeth R. Ballou, Delma S. Childers, Shahida Shahana, and Michelle D. Leach

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Evaluation of three herbicide resistance genes for use in genetic transformations and for potential crop protection in algae production, Andrew J. Bruggeman, Daniel Kuehler, and Donald P. Weeks

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Design, assessment, and in vivo evaluation of a computational model illustrating the role of CAV1 in CD4+ T-lymphocytes, Brittany D. Conroy, Tyler A. Herek, Timonthy D. Shew, Matthew Latner, Joshua J. Larson, Laura Allen, Paul H. Davis, Tomáš Helikar, and Christine E. Cutucache

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The evolution of respiratory O2/NO reductases: An out-of-the-phylogenetic-box perspective, Anne-Lise Ducluzeau, Barbara Schoepp-Cothenet, Robert van Lis, Frauke Baymann, Michael J. Russell, and Wilfgang Nitschke

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Iron chaperones PCBP1 and PCBP2 mediate the metallation of the dinuclear iron enzyme deoxyhypusine hydroxylase, Avery Frey, Anjali Nandal, Jong Hwan Park, Pamela Smith, Toshiki Tabe, Moon-Suhn Ryu, Manik Ghosh, Jaekwon Lee, Tracey Rouault, Myung Hee Park, and Caroline Philpott

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Arabidopsis Cuticular Wax Biosynthesis Is Negatively Regulated by the DEWAX Gene Encoding an AP2/ERF-Type Transcription Factor, Young Sam Go, Hyojin Kim, Hae Jin Kim, and Mi Chung Suh

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A rapid live-cell ELISA for characterizing antibodies against cell surface antigens of Chlamydomonas reinhardtii and its use in isolating algae from natural environments with related cell wall components, Wenzhi Jiang, Sarah Cossey, Julian N. Rosenberg, George A. Oyler, Bradley J.S.C. Olson, and Donald P. Weeks

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Mechanisms Underlying the Exquisite Sensitivity of Candida albicans to Combinatorial Cationic and Oxidative Stress That Enhances the Potent Fungicidal Activity of Phagocytes, Despoina Kaloriti, Mette Jacobsen, Zhikang Yin, Miranda Patterson, Anna Tillmann, Deborah A. Smith, Emily Cook, Tao You, Melissa J. Grimm, Iryna Bohovych, Celso Grebogi, Brahm H. Segal, Neil A.R. Gow, Ken Haynes, Janet Quinn, and Alistair J.P. Brown

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Sensitivity analysis of biological Boolean networks using information fusion based on nonadditive set functions, Naomi Kochi, Tomáš Helikar, Laura Allen, Jim A. Rogers, Zhenyuan Wang, and Mihaela T. Matache

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Pharmacokinetic and Biodistribution Assessment of a Near Infrared-Labeled PSMA-Specific Small Molecule in Tumor-Bearing Mice, Joy L. Kovar, Lael L. Cheung, Melanie A. Simpson, and D. Michael Olive

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Plant Acyl-CoA:Lysophosphatidylcholine Acyltransferases (LPCATs) Have Different Specificities in Their Forward and Reverse Reactions, Ida Lager, Jenny Lindberg Yilmaz, Xue-Rong Zhou, Katarzyna Jasieniecka, Michael Kazachkov, Peng Wang, Jitao Zou, Randall Weselake, Mark A. Smith, Shen Bayon, John M. Dyer, Jay Shockey, Ernst Heinz, Allan Green, Antoni Banas, and Sten Stymne

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Proline Biosynthesis Is Required for Endoplasmic Reticulum Stress Tolerance in Saccharomyces cerevisiae, Xinwen Liang, M. B. Dickman, and Donald F. Becker

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A Multienzyme Complex Channels Substrates and Electrons through Acetyl-CoA and Methane Biosynthesis Pathways in Methanosarcina, Dillon J. Lieber, Jennifer Catlett, Nandu Madayiputhiya, Renu Nandakumar, Madeline M. Lopez, William W. Metcalf, and Nicole R. Buan

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Overexpression of patatin-related phospholipase AIIIβ altered the content and composition of sphingolipids in Arabidopsis, Maoyin Li, Jonathan E. Markham, and Xuemin Wang

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Emerging regulatory paradigms in glutathione metabolism, Yilin Liu, Annastasia S. Hyde, Melanie A. Simpson, and Joseph J. Barycki

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Evidence That the C‑Terminal Domain of a Type B PutA Protein Contributes to Aldehyde Dehydrogenase Activity and Substrate Channeling, Min Luo, Shelbi Christgen, Nikhilesh Sanyal, Benjamin W. Arentson, Donald F. Becker, and John J. Tanner

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Genome-wide RNAi ionomics screen reveals new genes and regulation of human trace element metabolism, Mikalai I. Malinouski, Nesrin M. Hasan, Yan Zhang, Javier Seravalli, Jie Lin, Andrei Avanesov, Svetlana Lutsenko, and Vadim N. Gladyshev

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Emerging roles for hyaluronidase in cancer metastasis and therapy, Caitlin O. McAtee, Joseph J. Barycki, and Melanie A. Simpson

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Evidence for Hysteretic Substrate Channeling in the Proline Dehydrogenaseand ∆1-Pyrroline-5-carboxylate Dehydrogenase Coupled Reaction of Proline UtilizationA(PutA), Michael A Moxley, Nikhilesh Sanyal, Navasona Krishnan, John J. Tanner, and Donald F. Becker

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Saturated Free Fatty Acids Induce Cholangiocyte Lipoapoptosis, Sathish Kumar Natarajan, Sally A. Ingham, Ashley M. Mohr, Cody J. Wehrkamp, Anuttoma Ray, Sohini Roy, Sophie C. Cazanave, Mary Anne Phillippi, and Justin L. Mott

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Oxidative Stress, Redox Signaling, and Autophagy: Cell Death Versus Survival, Juliana Navarro-Yepes, Michaela Burns, Anandhan Annadurai, Oleh Khalimonchuk, Luz Maria del Razo, Betzabet Quintanilla-Vega, Aglaia Pappa, Mihalis I. Panayiotidis, and Rodrigo Franco

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Hepatoprotective role of Sestrin2 against chronic ER stress, Hwan-Woo Park, Haeli Park, Seung-Hyun Ro, Insook Jang, Ian A. Semple, David N. Kim, Myungjin Kim, Myeongjin Nam, Deqiang Zhang, Lei Yin, and Jun Hee Lee

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Pharmacological correction of obesity-induced autophagy arrest using calcium channel blockers, Hwan-Woo Park, Haeli Park, Ian A. Semple, Insook Jang, Seung-Hyun Ro, Myungjin Kim, Victor A. Cazares, Edward L. Stuenkel, Jung-Jae Kim, Jeong Sig Kim, and Jun Hee Lee

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Use of cysteine-reactive crosslinkers to probe conformational flexibility of human DJ-1 demonstrates that Glu18 mutations are dimers, Janani Prahlad, David N. Hauser, Nicole M. Milkovic, Mark R. Cookson, and Mark A. Wilson

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Comparative Analyses of Three Chlorella Species in Response to Light and Sugar Reveal Distinctive Lipid Accumulation Patterns in the Microalga C. sorokiniana, Julian N. Rosenberg, Naoko Kobayashi, Austin Barnes, Eric A. Noel, Michael J. Betenbaugh, and George A. Oyler

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A Course-Based Research Experience: How Benefits Change with Increased Investment in Instructional Time, Christopher D. Shaffer, Cheryl Bailey, and Students and TAs in Genomics Education Partnership courses

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New Clox Systems for Rapid and Efficient Gene Disruption in Candida albicans, Shahida Shahana, Delma S. Childers, Elizabeth R. Ballou, Iryna Bohovych, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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Arabidopsis Accelerated Cell Death 11, ACD11, Is a Ceramide-1-Phosphate Transfer Protein and Intermediary Regulator of Phytoceramide Levels, Dhirendra K. Simanshu, Xiuhong Zhai, David Munch, Daniel Hofius, Jonathan E. Markham, Jacek Bielawski, Alicja Bielawska, Lucy Malinina, Julian G. Molotkovsky, John W. Mundy, Dinshaw J. Patel, and Rhoderick E. Brown

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Structures of the PutA peripheral membrane flavoenzyme reveal a dynamic substrate-channeling tunnel and the quinone-binding site, Harkewal Singh, Benjamin W. Arentson, Donald F. Becker, and John J. Tanner

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Protein/Protein Interactions in the Mammalian Heme Degradation Pathway HEME OXYGENASE-2, CYTOCHROME P450 REDUCTASE, AND BILIVERDIN REDUCTASE, Andrea L. M. Spencer, Ireena Bagai, Donald F. Becker, Erik R. P. Zuiderweg, and Stephen W. Ragsdale

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Protein/Protein Interactions in the Mammalian Heme Degradation Pathway: Heme Oxygenase-2, Cytochrome P450 Reductase, and Biliverdin Reductase, Andrea L. M. Spencer, Ireena Bagai, Donald F. Becker, Erik R. P. Zuiderweg, and Stephen W. Ragsdale

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Preliminary joint X-ray and neutron protein crystallographic studies of ecDHFR complexed with folate and NADP+, Qun Wan, Audrey Y. Kovalevsky, Mark A. Wilson, Brad C. Bennett, Paul Langan, and Chris Dealwis

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Efficient CRISPR/Cas9-Mediated Gene Editing in Arabidopsis thaliana and Inheritance of Modified Genes in the T2 and T3 Generations, Donald P. Weeks, Bing Yang, and WenZhi Jiang

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XIAP Antagonist Embelin Inhibited Proliferation of Cholangiocarcinoma Cells, Cody J. Wehrkamp, Ashley R. Gutwein, Sathish Kumar Natarajan, Mary Anne Phillippi, and Justin L. Mott

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YCF1-Mediated Cadmium Resistance in Yeast Is Dependent on Copper Metabolism and Antioxidant Enzymes, Wenzhong Wei, Nathan Smith, Xiaobin Wu, Heejeong Kim, Javier Seravalli, Oleh Khalimonchuk, and Jaekwon Lee

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Book Review of Dane Kennedy, The Last Blank Spaces: Exploring Africa and Australia, Adrian S. Wisnicki

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Homogeneous low-molecular-weight heparins with reversible anticoagulant activity, Yongmei Xu, Chao Cai, Kasemsiri Chandarajoti, Po-Hung Hsieh, Lingyun Li, Truong Q. Pham, Erica M. Sparkenbaugh, Juzheng Sheng, Nigel S. Key, Rafal Pawlinski, Edward N. Harris, Robert J. Linhardt, and Jian Liu

2013

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Comparative metabolic profiling of Haberlea rhodopensis, Thellungiella halophyla, and Arabidopsis thaliana exposed to low temperature, Maria Benina, Toshihiro Obata, Nikolay Mehterov, Ivan Ivanov, Veselin Petrov, Valentina Toneva, Alisdair R. Fernie, and Tsanko S. Gechev

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Effect of salts on the Co-fermentation of glucose and xylose by a genetically engineered strain of Saccharomyces cerevisiae, Elizabeth Casey, Nathan S. Mosier, Jiri Adamec, Zachary Stockdale, Nancy Ho, and Miroslav Sedlak

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SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools, Claudine Chaouiya, Duncan Bérenguier, Sarah M. Keating, Aurélien Naldi, Martijn P. van Iersel, Nicolas Rodriguez, Andreas Dräger, Finja Büchel, Thomas Cokelaer, Bryan Kowal, Benjamin Wicks, Emanuel Gonçalves, Julien Dorier, Michel Page, Pedro T. Monteiro, Axel von Kamp, Ioannis Xenarios, Hidde de Jong, Michael Hucka, Steffen Klamt, Denis Thieffry, Nicolas Le Novère, Julio Saez-Rodriguez, and Tomáš Helikar

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Functional convergence of structurally distinct thioesterases from cyanobacteria and plants involved in phylloquinone biosynthesis, Fabienne Furt, William J. Allen, Joshua R. Widhalm, Peter Madzelan, Robert C. Rizzo, Gilles J. Basset, and Mark A. Wilson

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A Comprehensive, Multi-Scale Dynamical Model of ErbB Receptor Signal Transduction in Human Mammary Epithelial Cells, Tomáš Helikar, Naomi Kochi, Bryan Kowal, Manjari Dimri, Mayumi Naramura, Srikumar M. Raja, Vimla Band, Hamid Band, and Jim A. Rogers

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A Cell Simulator Platform: The Cell Collective, Tomáš Helikar, B. Kowal, and J. A. Rogers

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UDP-glucose Dehydrogenase Activity and Optimal Downstream Cellular Function Require Dynamic Reorganization at the Dimer-Dimer Subunit Interfaces, Annastasia S. Hyde, Ashley M. Thelen, Joseph J. Barycki, and Melanie A. Simpson

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Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice, Wen Zhi Jiang, Huanbin Zhou, Honghao Bi, Michael E. Fromm, Bing Yang, and Donald P. Weeks

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Rapid Detection and Quantification of Triacylglycerol by HPLC–ELSD in Chlamydomonas reinhardtii and Chlorella Strains, Naoko Kobayashi, Eric A. Noel, Austin Barnes, Julian Rosenberg, Concetta C. DiRusso, Paul N. Black, and George A. Oyler

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Proline Mechanisms of Stress Survival, Xinwen Liang, Lu Zhang, Sathish Kumar Natarajan, and Donald F. Becker

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Elucidating Causes of Diporeia Decline in the Great Lakes via Metabolomics: Physiological Responses after Exposure to Different Stressors, Suman Maity, Amber Jannasch, Jiri Adamec, James M. Watkins, Thomas Nalepa, Tomas O. Höök, and Maria S. Sepúlveda

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Overexpression of Human Fatty Acid Transport Protein 2/Very Long Chain Acyl-CoA Synthetase 1 (FATP2/Acsvl1) Reveals Distinct Patterns of Trafficking of Exogenous Fatty Acids, Elaina M. Melton, Ronald Cerny, Concetta C. DiRusso, and Paul N. Black

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Probing Arabidopsis Chloroplast Diacylglycerol Pools by Selectively Targeting Bacterial Diacylglycerol Kinase to Suborganellar Membranes, Bagyalakshmi Muthan, Rebecca Roston, John E. Froehlich, and Christoph Benning

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MicroRNA Function in Human Diseases, Sathish Kumar Natarajan, Mary Anne Smith, Cody J. Wehrkamp, Ashley M. Mohr, and Justin L. Mott

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The Hyaluronan Receptor for Endocytosis (HARE) Activates NF-κB-mediated Gene Expression in Response to 40–400-kDa, but Not Smaller or Larger, Hyaluronans, Madhu S. Pandey, Bruce A. Baggenstoss, Jennifer Washburn, Edward N. Harris, and Paul H. Weigel

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The basis for limited specificity and MHC restriction in a T cell receptor interface, Kurt H. Piepenbrink, Sydney J. Blevins, Daniel R. Scott, and Brian M. Baker

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SelenoDB 2.0: annotation of selenoprotein genes in animals and their genetic diversity in humans, Frederic Romagne, Didac Santesmasses, Louise White, Gaurab K. Sarangi, Marco Mariotti, Ron Hübler, Antje Weihmann, Genis Parra, Vadim N. Gladyshev, Roderic Guigo, and Sergi Castellano

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Reporters for the analysis of N-glycosylation in Candida albicans, Shahida Shahana, Hector M. Mora-Montes, Luis Castillo, Iryna Bohovych, Chirag C. Sheth, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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Mushroom Ganoderma lucidum Prevents Colitis- Associated Carcinogenesis in Mice, Daniel Sliva, Jagadish Loganathan, Jiahua Jiang, Andrej Jedinak, John G. Lamb, Colin Terry, Lee Ann Baldridge, Jiri Adamec, George E. Sandusky, and Shailesh Dudhgaonkar

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Diversity of Plant Methionine Sulfoxide Reductases B and Evolution of a Form Specific for Free Methionine Sulfoxide, Dung Tien Le, Lionel Tarrago, Yasuko Watanabe, Alaattin Kaya, Byung Cheon Lee, Uyen Tran, Rie Nishiyama, Dmitri E. Fomenko, Vadim N. Gladyshev, and Lam-Son Phan Tran

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Cytochrome b5 Reductase Encoded by CBR1 Is Essential for a Functional Male Gametophyte in Arabidopsis, Laura L. Wayne, James G. Wallis, Rajesh Kumar, Jonathan E. Markham, and John Browse

2012

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Substrate channeling in proline metabolism, Benjamin W. Arentson, Nikhilesh Sanyal, and Donald F. Becker

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Activation of the Carbon Concentrating Mechanism by CO2 Deprivation Coincides with Massive Transcriptional Restructuring in Chlamydomonas reinhardtii, Andrew J. Brueggeman, Dayananda S. Gangadharaiah, Matyas F. Cserhati, David Casero, Donald P. Weeks, and Istvan Ladunga

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Late-Stage Maturation of the Rieske Fe/S Protein: Mzm1 Stabilizes Rip1 but Does Not Facilitate Its Translocation by the AAA ATPase Bcs1, Tie-Zhong Cui, Pamela M. Smith, Jennifer L. Fox, Oleh Khalimonchuk, and Dennis R. Winge

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A role for BELLRINGER in cell wall development is supported by loss-of-function phenotypes, J Peter Etchells, Lucy Moore, Wen Zhi Jiang, Helen Prescott, Richard Capper, Nigel J. Saunders, Anuj M. Bhatt, and Hugh G. Dickinson

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Urinary Copper Elevation in a Mouse Model of Wilson’s Disease Is a Regulated Process to Specifically Decrease the Hepatic Copper Load, Lawrence W. Gray, Fangyu Peng, Shannon A. Molloy, Venkata S. Pendyala, Abigael Muchenditsi, Otto Muzik, Jaekwon Lee, Jack H. Kaplan, and Svetlana Lutsenko

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Connections between Sphingosine Kinase and Phospholipase D in the Abscisic Acid Signaling Pathway in Arabidopsis, Liang Guo, Girish Mishra, Jonathan E. Markham, Maoyin Li, Amanda Tawfall, Ruth Welti, and Xuemin Wang

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Bio-Logic Builder: A Non-Technical Tool for Building Dynamical, Qualitative Models, Tomáš Helikar, Bryan Kowal, Alex Madrahimov, Manish Shrestha, Jay Pedersen, Kahani Limbu, Ishwor Thapa, Thaine Rowley, Rahul Satalkar, Naomi Kochi, John Konvalina, and Jim A. Rogers

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The Cell Collective: Toward an open and collaborative approach to systems biology, Tomáš Helikar, Bryan Kowal, Sean McClenathan, Mitchell Bruckner, Thaine Rowley, Alex Madrahimov, Ben Wicks, Manish Shrestha, Kahani Limbu, and Jim A. Rogers

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UDP-glucose Dehydrogenase Polymorphisms from Patients with Congenital Heart Valve Defects Disrupt Enzyme Stability and Quaternary Assembly, Annastasia S. Hyde, Erin L. Farmer, Katherine E. Easley, Kristy van Lammeren, Vincent M. Christoffels, Joseph J. Barycki, Jeroen Bakkers, and Melanie A. Simpson

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Cross Regulation of Sirtuin 1, AMPK, and PPARy in Conjugated Linoleic Acid Treated Adipocytes, Shan Jiang, Wei Wang, Jess Miner, and Michael E. Fromm

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Selective Oma1 Protease-mediated Proteolysis of Cox1 Subunit of Cytochrome Oxidase in Assembly Mutants, Oleh Khalimonchuk, Mi-Young Jeong, Talina Watts, Elliott Ferris, and Dennis R. Winge

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Oligomerization of Heme o Synthase in Cytochrome Oxidase Biogenesis Is Mediated by Cytochrome Oxidase Assembly Factor Coa2, Oleh Khalimonchuk, Hyung Kim, Talina Watts, Xochitl Perez-Martinez, and Dennis R. Winge

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Structure, function, and assembly of heme centers in mitochondrial respiratory complexes, Hyung J. Kim, Oleh Khalimonchuk, Pamela M. Smith, and Dennis R. Winge

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Conservation of oxidative protein stabilization in an insect homologue of the parkinsonism-associated protein DJ-1, Jiusheng Lin, Janani Prahlad, and Mark A. Wilson

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High-efficiency TALEN-based gene editing produces disease-resistant rice, Ting Li, Martin H. Spalding, Donald P. Weeks, and Bing Yang

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Crystal Structures and Kinetics of Monofunctional Proline Dehydrogenase Provide Insight into Substrate Recognition and Conformational Changes Associated With Flavin Reduction and Product Release, Min Luo, Benjamin W. Arentson, Dhiraj Srivastava, Donald F. Becker, and John J. Tanner

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Influence of Peptide Dipoles and Hydrogen Bonds on Reactive Cysteine pKa Values in Fission Yeast DJ-1, Peter Madzelan, Tetyana Labunksa, and Mark A. Wilson

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Composition and Evolution of the Vertebrate and Mammalian Selenoproteomes, Marco Mariotti, Perry G. Ridge, Yan Zhang, Alexei V. Lobanov, Thomas H. Pringle, Roderic Guigo, Dolph L. Hatfield, and Vadim N. Gladyshev

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Small but Crucial: The Novel Small Heat Shock Protein Hsp21 Mediates Stress Adaptation and Virulence in Candida albicans, Francois L. Mayer, Duncan Wilson, Ilse D. Jacobsen, Pedro Miramón, Silvia Slesiona, Iryna Bohovych, Alistair J.P. Brown, and Bernhard Hube

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Cellular Responses of Candida albicans to Phagocytosis and the Extracellular Activities of Neutrophils Are Critical to Counteract Carbohydrate Starvation, Oxidative and Nitrosative Stress, Pedro Miramón, Christine Dunker, Hanna Windecker, Iryna Bohovych, Alistair J.P. Brown, Oliver Kurzai, and Bernhard Hube

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Role of apoptosis-inducing factor, proline dehydrogenase, and NADPH oxidase in apoptosis and oxidative stress, Sathish Kumar Natarajan and Donald F. Becker

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Proline dehydrogenase is essential for proline protection against hydrogen peroxide induced cell death, Sathish Kumar Natarajan, Weidong Zhu, Xinwen Liang, Lu Zhang, Andrew Demers, Matthew C. Zimmerman, Melanie A. Simpson, and Donald F. Becker

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Probing Structural Selectivity of Synthetic Heparin Binding to Stabilin Protein Receptors, Elizabeth H. Pempe, Yongmei Xu, Sandhya Gopalakrishnan, Jian Liu, and Edward N. Harris

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Dengue Virus Infection Perturbs Lipid Homeostasis in Infected Mosquito Cells, Rushika Perera, Catherine Riley, Giorgis Isaac, Amber S. Hopf-Jannasch, Ronald J. Moore, Karl W. Weitz, Ljiljana Pasa-Tolic, Thomas O. Metz, Jiri Adamec, and Richard J. Kuhn

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Glutaredoxin 1 Protects Dopaminergic Cells by Increased Protein Glutathionylation in Experimental Parkinson's Disease, Humberto Rodriguez-Rocha, Aracely Garcia Garcia, Laura Zavala-Flores, Sumin Li, Nandakumar Madayiputhiya, and Rodrigo Franco

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TGD1, -2, and -3 Proteins Involved in Lipid Trafficking Form ATP-binding Cassette (ABC) Transporter with Multiple Substrate-binding Proteins, Rebecca Roston, Jinpeng Gao, Monika W. Murcha, James Whelan, and Christoph Benning

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The Evolutionary Rewiring of Ubiquitination Targets Has Reprogrammed the Regulation of Carbon Assimilation in the Pathogenic Yeast Candida albicans, Doblin Sandai, Zhikang Yin, Laura Selway, David Stead, Janet Walker, Michelle D. Leach, Iryna Bohovych, Iuliana V. Ene, Stavroula Kastora, Susan Budge, Carol A. Munro, Frank C. Odds, Neil A.R. Gow, and Alistair J.P. Brown

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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy, Kankshita Swaminathan, Won Byoung Chae, Therese Mitros, Kranthi Varala, Liang Xie, Adam Barling, Katarzyna Glowacka, Megan Hall, Stanislaw Jezowski, Ray Ming, Matthew Hudson, John A. Juvik, Daniel S. Rokhsar, and Stephen P. Moose

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Ergodic Sets as Cell Phenotype of Budding Yeast Cell Cycle, Robert G. Todd and Tomáš Helikar

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Knockout of the 15 kDa Selenoprotein Protects against Chemically-Induced Aberrant Crypt Formation in Mice, Petra A. Tsuji, Bradley A. Carlson, Salvador Naranjo-Suarez, Min-Hyuk Yoo, Xue-Ming Xu, Dmitri E. Fomenko, Vadim Gladyshev, Dolph L. Hatfield, and Cindy D. Davis

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Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779, Astrid Vieler, Guangxi Wu, Chia-Hong Tsai, Blair Bullard, Adam J. Cornish, Christopher Harvey, Ida-Barbara Reca, Chelsea Thornburg, Rujira Achawanantakun, Christopher J. Buehl, Michael S. Campbell, David Cavalier, Kevin L. Childs, Teresa J. Clark, Rahul Deshpande, Erika Erickson, Ann Armenia Ferguson, Witawas Handee, Que Kong, Xiaobo Li, Bensheng Liu, Steven Lundback, Cheng Peng, Rebecca Roston, Michigan State University, Jeffrey P. Simpson, Allan TerBush, Jaruswan Warakanont, Simone Zäuner, Eva M. Farre, Eric L. Hegg, Ning Jiang, Min-Hao Kuo, Yan Lu, Krishna K. Niyogi, John Ohlrogge, Katherine W. Osteryoung, Yair Shachar-Hill, Barbara B. Sears, Yanni Sun, Hideki Takahashi, Mark Yandell, Shin-Han Shiu, and Christoph Benning

2011

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Development and optimization of an LC-MS/MS-based method for simultaneous quantification of vitamin D2, vitamin D3, 25- hydroxyvitamin D2 and 25-hydroxyvitamin D3, Jiri Adamec, Amber Jannasch, Jianjie Huang, Emily Hohman, James C. Fleet, Munro Peacock, Mario G. Ferruzzi, Berdine Martin, and Connie M. Weaver

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The LYR Protein Mzm1 Functions in the Insertion of the Rieske Fe/S Protein in Yeast Mitochondria, Aaron Atkinson, Pamela Smith, Jennifer L. Fox, Tie-Shong Cui, Oleh Khalimonchuk, and Dennis R. Winge

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Sphingolipids in the Root Play an Important Role in Regulating the Leaf Ionome in Arabidopsis thaliana, Dai-Yin Chao, Kenneth Gable, Ming Chen, Ivan Baxter, Charles R. Dietrich, Edgar B. Cahoon, Mary Lou Guerinot, Brett Lahner, Shiyu Lu, Jonathan E. Markham, Joe Morrissey, Gongshe Han, Sita Gupta, Jeffrey M. Harmon, Jan G. Jaworski, Teresa M. Dunn, and David E. Salt