Biological Sciences, School of
School of Biological Sciences: Faculty Publications
2011
Survival Rates of Planidial Larvae of the Parasitoid Fly Ormia ochracea (Diptera: Tachinidae), Oliver M. Beckers, Cassandra M. Martin, and William E. Wagner Jr.
Male Field Crickets Infested by Parasitoid Flies Express Phenotypes that May Benefit the Parasitoids, Oliver M. Beckers and William E. Wagner
Composite Effects of Polymorphisms near Multiple Regulatory Elements Create a Major-Effect QTL, Ryan D. Bickel, Artyom Kopp, and Sergey V. Nuzhdin
Morphine potentiates neuropathogenesis of SIV infection in rhesus macaques, Sirosh M. Bokhari, Ramakrishna Hedge, Shannon Callen, Honghong Yao, Istvan Adany, Qingsheng Li, Zhuang Li, David Pinson, Hung-Wen Yeh, Paul D. Cheney, and Shilpa Buch
EFFECTS OF POSTMORTEM INTERVAL AND PRESERVATION METHOD ON RNA ISOLATED FROM FIELD-PRESERVED AVIAN TISSUES Efectos del Intervalo Post-Mortem y del Método de Preservación en el ARN Aislado de Tejidos de Aves Preservados en el Campo, Zachary A. Cheviron, Matthew D. Carling, and Robb T. Brumfield
Normalization and centering of array-based heterologous genome hybridization based on divergent control probes, Brian J. Darby, Kenneth L. Jones, David Wheeler, and Michael A. Herman
Copper Tolerance of Saccharomyces cerevisiae Nonsense-Mediated mRNA Decay Mutants, Rafael Deliz-Aguirre, Audrey L. Atkin, and Bessie W. Kebaara
Variations on a theme: diversification of cuticular hydrocarbons in a clade of cactophilic Drosophila, Cássia C. de Oliveira, Maura H. Manfrin, Fábio de M Sene, Larry L. Jackson, and William J. Etges
The Arabidopsis Trithorax-like Factor ATX1 Functions in Dehydration Stress Responses via ABA-Dependent and ABA-Independent Pathways, Yong Ding, Zoya Avramova, and Michael Fromm
More Ornamented Males Exhibit Increased Predation Risk and Antipredatory Escapes, but not Greater Mortality, Kasey D. Fowler-Finn and Eileen Hebets
The degree of response to increased predation risk corresponds to male secondary sexual traits, Kasey Fowler-Finn and Eileen Hebets
Zap1 Control of Cell-Cell Signaling in Candida albicans Biofilms, Shantanu Ganguly, Andrew C. Bishop, Wenjie Xu, Suman Ghosh, Kenneth W. Nickerson, Frederick Lanni, Jana Patton-Vogt, and Aaron P. Mitchell
Some Laelapine Mites (Acari: Laelapidae) Ectoparasitic on Small Mammals in the Galapagos Islands, including a New Species of Gigantolaelaps from Aegialomys galapagoensis, Donald D. Gettinger, Fernanda Martins-Hatano, and Scott Lyell Gardner
Environmental and genetic perturbations reveal different networks of metabolic regulation, Anthony J. Greenberg, Sean R. Hacket, Lawrence G. Harshman, and Andrew G. Clark
Current Status and Future Directions of Research in Complex Signaling, Eileen Hebets
Chemical Communication in a Multimodal Context, Eileen A. Hebets and Aaron S. Rundus
Enigmatic Ornamentation Eases Male Reliance on Courtship Performance for Mating Success, Eileen Hebets, Jay A. Stafstrom, Rafael L. Rodriguez, and Dustin J. Wilgers
The Effects of Belowground Resources on Aboveground Allometric Growth in Bornean Tree Species, Katherine D. Heineman, Ethan Jensen, Autumn Shapland, Brett Bogenrief, Sylvester Tan, Richard Rebarber, and Sabrina E. Russo
Real-Time Dynamic Imaging of Virus Distribution In Vivo, Sean E. Hofherr, Kristen E. Adams, Christopher Y. Chen, Shannon May, Eric A. Weaver, and Michael A. Barry
Raptors of Nebraska, Paul A. Johnsgard
Increased transsulfuration mediates longevity and dietary restriction in Drosophila, Hadise Kabil, Omer Kabil, Ruma Banerjee, Lawrence G. Harshman, and Scott D. Pletcher
Population Dynamics of the Western Prickly Pear, Opuntia macrorhiza (Cactaceae), Kathleen H. Keeler and Brigitte Tenhumberg
Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis, Karsten Klopffleisch, Nguyen Phan, Kelsey Augustin, Robert S. Bayne, Katherine S. Booker, Jose R. Botella, Nicholas C. Carpita, Tyrell Carr, Jin-Gui Chen, Thomas Ryan Cooke, Arwen Frick-Cheng, Erin J. Friedman, Brandon Fulk, Michael G. Hahn, Kun Jiang, Lucia Jorda, Lydia Kruppe, Chenggang Liu, Justine Lorek, Maureen C. McCann, Antonio Molina, Etsuko N. Moriyama, M. Shahid Mukhtar, Yashwanti Mudgil, Sivakumar Pattathil, John Schwarz, Steven Seta, Matthew Tan, Ulrike Temp, Yuri Trusov, Daisuke Urano, Bastian Welter, Jing Yang, Ralph Panstruga, Joachim F. Uhrig, and Alan M. Jones
Characterization of a Dipartite Iron Uptake System from Uropathogenic Escherichia coli Strain, Doreen Koch, Anson C. K. Chan, Michael E.P. Murphy, Hauke Lilie, Gregor Grass, and Dietrich H. Nies
Maize cellulosic biofuels: soil carbon loss can be a hidden cost of residue removal, Amy Kochsiek and Johannes Knops
Phylogenetic diversity of Fe(III)-reducing microorganisms in rice paddy soil: Enrichment cultures with different short-chain fatty acids as electron donors, Huijuan Li, Jingjing Peng, Karrie A. Weber, and Yongguan Zhu
Morphologic Clues to the Origins of Iron Oxide–Cemented Spheroids, Boxworks, and Pipelike Concretions, Navajo Sandstone of South-Central Utah, U.S.A., David B. Loope, Richard M. Kettler, and Karrie A. Weber
Priority resource access mediates competitive intensity between an invasive weevil and native floral herbivores, Svata M. Louda, Tatyana A. Rand, A. A. R. Kula, A. E. Arnett, N. M. West, and Brigitte Tenhumberg
VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricus, Yukari Maezato, Amanda Daugherty, Karl Dana, Edith Soo, Charlotte Cooper, Sabrina Tachdjian, Robert M. Kelly, and Paul H. Blum
Sex Chromosome-Specific Regulation in the Drosophila Male Germline But Little Evidence for Chromosomal Dosage Compensation or Meiotic Inactivation, Colin D. Meiklejohn, Emily L. Landeen, Jodi M. Cook, Sarah B. Kingan, and Daven C. Presgraves
Dur3 is the major urea transporter in Candida albicans and is co-regulated with the urea amidolyase Dur1,2, Dhammika H. M. L. P Navarathna, Aditi Das, Joachim Morschhauser, Kenneth W. Nickerson, and David D. Roberts
A cytoplasm-specific activity encoded by the Trithorax-like ATX1 gene, Ivan Ndamukong, Hanna Lapko, Ronald L. Cerny, and Zoya Avramova
Integral projection model of insect herbivore effects on Cirsium altissimum populations along productivity gradients, Karen E. Rose, F. Leland Russell, and Svata M. Louda
Genomic and Resistance Gene Homolog Diversity of the Dominant Tallgrass Prairie Species across the U.S. Great Plains Precipitation Gradient, Matthew N. Rouse, Amgad A. Saleh, Amadou Seck, Kathleen H. Keeler, Steven E. Travers, Scot H. Hulbert, and Karen A. Garrett
Females Are Choosier in the Dark: Environment-Dependent Reliance on Courtship Components and Its Impact on Fitness, Aaron S. Rundus, Laura Sullivan-Beckers, Dustin J. Wilgers, and Eileen Hebets
Evidence for Air Movement Signals in the Agonistic Behaviour of a Nocturnal Arachnid (Order Amblypygi), Roger D. Santer and Eileen A. Hebets
Comparative genomics of proteins involved in RNA nucleocytoplasmic export, Mariana Serpeloni, Newton M. Vidal, Samuel Goldenberg, Andréa R. Ávila, and Federico G. Hoffmann
Analyses of Fruit Flies That Do Not Express Selenoproteins or Express the Mouse Selenoprotein, Methionine Sulfoxide Reductase B1, Reveal a Role of Selenoproteins in Stress Resistance, Valentina A. Shchedrina, Hadise Kabil, Gerd Vorbruggen, Byung Cheon Lee, Anton A. Turanov, Mitsuko Hirosawa- Takamori, Hwa- Young Kim, Lawrence G. Harshman, Dolph L. Hatfield, and Vadim N. Gladyshev
Hosts Improve the Reliability of Chick Recognition by Delaying the Hatching of Brood Parasitic Eggs, Daizaburo Shizuka and Bruce E. Lyon
Aphids: A Model for Polyphenism and Epigenetics, Dayalan G. Srinivasan and Jennifer A. Brisson
Molecular evolution of urea amidolyase and urea carboxylase in fungi, Pooja K. Strope, Kenneth W. Nickerson, Steven D. Harris, and Etsuko N. Moriyama
Humic Acid-Oxidizing, Nitrate-Reducing Bacteria in Agricultural Soils, J. Ian Van Trump, Kelly C. Wrighton, J. Cameron Thrash, Karrie A. Weber, Gary L. Andersen, and John D. Coates
dtorsin, the Drosophila Ortholog of the Early-Onset Dystonia TOR1A (DYT1), Plays a Novel Role in Dopamine Metabolism, Noriko Wakabayashi-Ito, Olugbenga M. Doherty, Hideaki Moriyama, Xandra O. Breakefield, James F. Gusella, Janis M. O’Donnell, and Naoto Ito
Protection against Divergent Influenza H1N1 Virus by a Centralized Influenza Hemagglutinin, Eric A. Weaver, Adam M. Rubrum, Richard J. Webby, and Michael A. Barry
Environmental and Taxonomic Bacterial Diversity of Anaerobic Uranium(IV) Bio-Oxidation, Karrie A. Weber, J. Cameron Thrash, J. Ian Van Trump, Laurie A. Achenbach, and John D. Coates
Complex courtship displays facilitate male reproductive success and plasticity in signaling across variable environments, Dustin Wilgers and Eileen Hebets
A sticky situation: Solifugids (Arachnida, Solifugae) use adhesive organs on their pedipalps for prey capture, Rodrigo H. Willemart, Roger D. Santer, Andrew J. Spence, and Eileen Hebets
Interferon Regulatory Factor 4 (IRF-4) Targets IRF-5 to Regulate Epstein-Barr Virus Transformation, Dongsheng Xu, Florencia Meyer, Erica Ehlers, Laura Blasnitz, and Luwen Zhang
2010
Association of rs780094 in GCKR with Metabolic Traits and Incident Diabetes and Cardiovascular Disease: The ARIC Study, Mark Bi, Wen Hong Linda Kao, Eric Boerwinkle, Ron C. Hoogeveen, Laura J. Rasmussen-Torvik, Brad C. Astor, Kari E. North, Joseph Coresh, and Anna Kottgen
The spatial influence of aboveground diversity on belowground communities, T. Bliss, Tom Powers, and Chad Brassil
Cognitive Representation in Transitive Inference: A Comparison of Four Corvid Species, Alan B. Bond, Cynthia A. Wei, and Alan C. Kamil
Structured Population Dynamics: An Introduction to Integral Modeling, Joseph Briggs, Kathryn Dabbs, Michael Holm, Joan Lubben, Richard Rebarber, Brigitte Tenhumberg, and Daniel Riser-Espinoza
Genome Sequence of the Pea Aphid Acyrthosiphon pisum, Jennifer A. Brisson, Stephen Richards, and International Aphid Genomics Consortium
Female mate choice based upon male motor performance, John Byers, Eileen Hebets, and Jeffrey Podos
Completed Genome Sequence of the Anaerobic Iron-Oxidizing Bacterium Acidovorax ebreus Strain TPSY, Kathryne G. Byrne-Bailey, Karrie A. Weber, Antinea H. Chair, Saumyaditya Bose, Traci Knox, Trisha L. Spanbauer, Olga Chertkov, and John D. Coates
The Capsid Protein of Turnip Crinkle Virus Overcomes Two Separate Defense Barriers to Facilitate Systemic Movement of the Virus in Arabidopsis, Mingxia Cao, Xiaohong Yi, Kristen Willie, Junyan Lin, Xiuchun Zhang, Margaret G. Redinbaugh, Anne E. Simon, Thomas Jack Morris, and Feng Qu
Nm23-H1 can induce cell cycle arrest and apoptosis in B cells, Tathagata Choudhuri, Masanao Murakami, Rajeev Kaul, Sushil K. Sahu, Suchitra Mohanty, Subhash C. Verma, Pankaj Kumar, and Erle S. Robertson
Increased Dendrite Branching in AβPP/PS1 Mice and Elongation of Dendrite Arbors by Fasudil Administration, Brian A. Couch, George J. DeMarco, Shannon L. Gourley, and Anthony J. Koleske
A signal-substrate match in the substrate-borne component of a multimodal courtship display, Damian O. Elias, Andrew C. Mason, and Eileen Hebets
Glycopeptidome of a Heavily N-Glycosylated Cell Surface Glycoprotein of Dictyostelium Implicated in Cell Adhesion, Christa L. Feasley, Jennifer M. Johnson, Christopher M. West, and Catherine P. Chia
Locomotion in Response to Shifting Climate Zones: Not So Fast, Martin E. Feder, Theodore Garland Jr., James H. Marden, and Anthony J. Zera
AIDS and optic neuritis in a rhesus monkey infected with the R5 clade C SHIV-1157ipd3N4, Anapatricia Garcίa, Nagadenahalli B. Siddappa, Qingsheng Li, Ashley T. Haase, Katherine Paul, Fawn Stroud, Xiaodong Zhang, Jack A. Fountain, François Villinger, Francis J. Novembre, James G. Else, W. Evan Secor, and Ruth M. Ruprecht
Candida albicans cellwall components and farnesol stimulate the expression of both inflammatory and regulatory cytokines in the murine RAW264.7 macrophage cell line, Suman Ghosh, Nina Howe, Katie Volk, Swetha Tati, Kenneth W. Nickerson, and Thomas M. Petro
What scatter-hoarding animals have taught us about small-scale navigation, Kristy L. Gould, Debbie M. Kelly, and Alan Kamil
Bioassays of Compounds with Potential Juvenoid Activity on Drosophila melanogaster: Juvenile Hormone III, Bisepoxide Juvenile Hormone III, and Methyl Farnesoates, Lawrence G. Harshman, Ki-Duck Song, Josephina Casas, A. Schuurmans, Eichii Kuwano, Stephen D. Kachman, Lynn M. Riddiford, and Bruce D. Hammock
The polypeptide Syn67 interacts physically with human holocarboxylase synthetase, but is not a target for biotinylation, Yousef I. Hassan, Hideaki Moriyama, and Janos Zempleni
New Species in the Genus Monoecocesuts (Cestoda: Anoplocephalidae) from Neotropical Rodents (Caviidae and Sigmodontidae), Terry R. Haverkost and Scott Lyell Gardner
Mate Choice and Learning, Eileen Hebets and Laura Sullivan-Beckers
Ducks, Geese, and Swans of the World, Revised Edition [complete work], Paul A. Johnsgard
Waterfowl of North America, Revised Edition [complete work], Paul A. Johnsgard
Effects of Plant Sex on Range Distributions and Allocation to Reproduction, Marc T.J. Johnson, Stacey DeWitt Smith, and Mark D. Rausher
The Role of Litter Quality Feedbacks in Terrestrial Nitrogen and Phosphorus Cycling, Johannes M.H. Knops, David A. Wedin, and Shahid Naeem
Activity and Toxicity of Farnesol towards Candida albicans Are Dependent on Growth Conditions, Melanie L. Langford, Sahar Hasim, Kenneth W. Nickerson, and Audrey L. Atkin
EPSVR and EPMeta: Prediction of Antigenic Epitopes Using Support Vector Regression and Multiple Server Results, Shide Liang, Dandan Zheng, Daron M. Standley, Bo Yao, Martin Zacharias, and Chi Zhang
Challenges and counter challenges in HIV/AIDS, Qingsheng Li and Charles Wood
Agmatidine, a modified cytidine in the anticodon of archaeal tRNAIle, base pairs with adenosine but not with guanosine, Debabrata Mandal, Caroline Köhrer, Dan Su, Susan P. Russell, Kady Krivos, Colette M. Castleberry, Paul H. Blum, Patrick A. Limbach, Dieter Söll, and Uttam L. RajBhandary
Female Field Crickets Incur Increased Parasitism Risk When Near Preferred Song, Cassandra M. Martin and William E. Wagner Jr.
Genetic conflict and sex chromosome evolution, Colin D. Meiklejohn and Yun Tao
Contributions of demography and dispersal parameters to the spatial spread of a stage-structured insect invasion, Tom E. X. Miller and Brigitte Tenhumberg
Mitochondrial-nuclear epistasis affects fitness within species but does not contribute to fixed incompatibilities between species of Drosophila, Kristi L. Montooth, Colin D. Meiklejohn, Dawn N. Abt, and David M. Rand
Evolutionary aspects of urea utilization by fungi, Dhammika H. M. L. P Navarathna, Steven D. Harris, David D. Roberts, and Kenneth W. Nickerson
Phosphatidylinositol 5-Phosphate Links Dehydration Stress to the Activity of Arabidopsis Trithorax-Like Factor ATX1, Ivan Ndamukong, David R. Jones, Hanna Lapko, Nullin Divecha, and Zoya V. Avramova
Evolution of the Kdo2-lipid A Biosynthesis in Bacteria, Stephen O. Opiyo, Rosevelt L. Pardy, Hideaki Moriyama, and Etsuko N. Moriyama
The Abl and Arg non-receptor tyrosine kinases regulate different zones of stress fiber, focal adhesion, and contractile network localization in spreading fibroblasts, Justin G. Peacock, Brian A. Couch, and Anthony J. Koleske
Synaptic Clustering of PSD-95 Is Regulated by c-Abl through Tyrosine Phosphorylation, Karen Perez de Arce, Lorena Varela-Nallar, Olivia Farias, Alejandra Cifuentes, Paulina Bull, Brian A. Couch, Anthony J. Koleske, Nibaldo C. Inestrosa, and Alejandra R. Alvarez
Viral trans-Factor Independent Replication of Human Papillomavirus Genomes, Daraporn Pittayakhajonwut and Peter C. Angeletti
Multimodal courtship efficacy of Schizocosa retrorsa wolf spiders: Implications of an additional signal modality, Aaron S. Rundus, Roger D. Santer, and Eileen Hebets
Seed availability and insect herbivory limit recruitment and adult density of native tall thistle, F. Leland Russell, Karen E. Rose, and Svata M. Louda
Variation in Leaf Stomatal Traits of 28 Tree Species in Relation to Gas Exchange along an Edaphic Gradient in a Bornean Rain Forest, Sabrina E. Russo, Whitney Logan Cannon, Christian Elowsky, Sylvester Tan, and Stuart J. Davies
Interspecific Relationships among Growth, Mortality and Xylem Traits of Woody Species from New Zealand, Sabrina E. Russo, Kerry L. Jenkins, Susan K. Wiser, Maria Uriarte, Richard P. Duncan, and David A. Coomes
Positive Carotenoid Balance Correlates with Greater Reproductive Performance in a Wild Bird, Rebecca Safran, Kevin J. McGraw, Matt Wilkins, Joanna K. Hubbard, and Julie Marling
Isolation and Characterization of Bacteria Resistant to Metallic Copper Surfaces, Christophe Espírito Santo, Paula Vasconcelos Morais, and Gregor Grass
Host Genes Associated with HIV-1 Replication in Lymphatic Tissue, Anthony J. Smith, Qingsheng Li, Stephen W. Wietgrefe, Timothy W. Schacker, Cavan S. Reilly, and Ashley T. Haase
The Effects of Flower Color Transitions on Diversification Rates in Morning Glories (Ipomoea subg. Quamoclit, Convolvulaceae), Stacey DeWitt Smith, Richard E. Miller, Sarah P. Otto, Richard G. FitzJohn, and Mark D. Rausher
No interaction between competition and herbivory in limiting introduced Cirsium vulgare rosette growth and reproduction, Tomomi Suwa, Svata M. Louda, and F. Leland Russell
Ignoring Population Structure Can Lead to Erroneous Predictions of Future Population Size, Brigitte Tenhumberg
COMPOSITIONS AND METHODS FOR CONTROLLING PLANT PARASITIC NEMATODES, Harold N. Trick, Judith L. Roe, Timothy C. Todd, and Michael A. Herman
Dynamic Changes in Genome-Wide Histone H3 Changes Lysine 4 Methylation Patterns in Response to Dehydration Stress in Arabidopsis thaliana, Karin V. van Dijk, Yong Ding, Sridar Achary Malkaram, Jean-Jack Riethoven, Rong Liu, Jingyi Yang, Peter Laczko, Han Chen, Yuannan Xia, Istvan Ladunga, Zoya V. Avramova, and Michael E. Fromm
A Detailed Phylogenetic Analysis of FIV in the United States, Eric A. Weaver
Integrating spatial and temporal approaches to understanding species richness, Ethan P. White, S. K. Morgan Ernest, Peter B. Adler, Allen H. Hurlbert, and S. Kathleen Lyons