Computer Science and Engineering, Department of
Computer Science, Computer Engineering, and Bioinformatics: Faculty Publications
2020
Variability in the Effectiveness of Psychological Interventions based on Machine Learning in STEM Education, Mohammad Hasan and Bilal Khan
Resource Allocation and QoS Guarantees for Real World IP Traffic in Integrated XG-PON and IEEE802.11e EDCA Networks, Ravneet Kaur, Akshita Gupta, Anand Srivastava, Bijoy Chand Chatterjee, Abhijit Mitra, Byrav Ramamurthy, and Vivek Ashok Bohara
Global Technology Economic Analysis Paradigm, Iwasan D. Kejawa Ed.D
The Effects of Computer and Information Technology on Education, Iwasan D. Kejawa
Development and Validation of the Computational Thinking Concepts and Skills Test, Markeya S. Peteranetz, Patrick M. Morrow, and Leen-Kiat Soh
Development and Validation of the Computational Thinking Concepts and Skills Test, Markeya S. Peteranetz, Patrick M. Morrow, and Leen-Kiat Soh
A Multi-level Analysis of the Relationship between Instructional Practices and Retention in Computer Science, Markeya S. Peteranetz and Leen-Kiat Soh
A Multi-level Analysis of the Relationship between Instructional Practices and Retention in Computer Science, Markeya S. Peteranetz and Leen-Kiat Soh
ELECTROMAGNETIC POWER CONVERTER, Wei Qiao, Liyan Qu, and Haosen Wang
Estimating the maximum rise in temperature according to climate models using abstract interpretation, Peter Revesz and Robert J. Woodward
Paired Trial Classification: A Novel Deep Learning Technique for MVPA, Jacob M. Williams; Ashok Samal; Prahalada K. Rao; and Matthew R, Johnson
Platinum: Reusing Constraint Solutions in Bounded Analysis of Relational Logic, Guolong Zheng, Hamid Bagheri, Gregg Rothermel, and Jianghao Wang
2019
Microbiome-Gut-Brain Axis as a Biomolecular Communication Network for the Internet of Bio-NanoThings, Ian F. Akyildiz, Jiande Chen, Maysam Ghovanloo, Ulkuhan Guler, Tevhide Ozkaya-Ahmadov, Massimiliano Pierobon, A Faith Sarioglu, and Bige D. Unluturk
Intercomparison of Small Unmanned Aircraft System (sUAS) Measurements for Atmospheric Science during the LAPSE-RATE Campaign, Lindsay Barbieri, Stephan T. Kral, Sean C. C. Bailey, Amy E. Frazier, Jamey D. Jacob, Joachim Reuder, David Brus, Phillip B. Chilson, Christopher Crick, Carrick Detweiler, Abhiram Doddi, Jack Elston, Hosein Foroutan, Javier Gonzalez-Rocha, Brian R. Greene, Marcelo I. Guzman, Adam L. Houston, Ashraful Islam, Osku Kemppinen, Dale Lawrence, Elizabeth A. Pillar-Little, Shane D. Ross, Michael Sama, David G. Schmale III, Travis J. Schuyler, Ajay Shankar, Suzanne W. Smith, Sean Waugh, Cory Dixon, Steve Borenstein, and Gijs de Boer
Co-Regulated Consensus of Cyber-Physical Resources in Multi-Agent Unmanned Aircraft Systems, Chandima Fernando, Carrick Detweiler, and Justin Bradley
Design and Evaluation of Sensor Housing for Boundary Layer Profiling Using Multirotors, Ashraful Islam, Adam L. Houston, Ajay Shankar, and Carrick Detweiler
Automatic Nonnutritive Suck Waveform Discrimination and Feature Extraction in Preterm Infants, Chunxiao Liao, Austin O. Rosner, Jill L. Maron, Dongli Song, and Steven M. Barlow
ENFORCING PERSISTENCY FOR BATTERY - BACKED MOBILE DEVICES, Hao Luo, Hong Jiang, and Lei Tian
Secrecy Capacity and Secure Distance for Diffusion-Based Molecular Communication Systems, Lorenzo Mucchi, Alessio Martinelli, Sara Jayousi, Stefano Caputo, and Massimiliano Pierobon
A Data-Challenge Case Study of Analyte Detection and Identification with Comprehensive Two-Dimensional Gas Chromatography with Mass Spectrometry (GC-GC-MS), Stephen E. Reichenbach, Qingping Tao, Chiara Cordero, and Carlo Bicchi
Using Data Mining Algorithms to Discover Regular Sound Changes among Languages, Peter Revesz
Peacock Motifs in Rig Vedic Hymns and Hungarian Folksongs, Peter Z. Revesz
Applying Molecular Communication Theory to Multi-Scale Integrated Models of Biological Pathways, Zahmeeth Sakkaff, Bige Deniz Unluturk, and Massimiliano Pierobon
Applying Molecular Communication Theory to Multi-Scale Integrated Models of Biological Pathways, Zahmeeth Sakkaff, Bige Deniz Unluturk, and Massimiliano Pierobon
JITANA: A modern hybrid program analysis framework for android platforms, Yutaka Tsutano, Shakthi Bachala, Witawas Srisa-an, Gregg Rothermel, and Jackson Dinh
2018
RECTA: Regulon Identification Based on Comparative Genomics and Transcriptomics Analysis, Xin Chen, Anjun Ma, Adam McDermaid, Hanyuan Zhang, Chao Liu, Huansheng Cao, and Qin Ma
Holistic and component plant phenotyping using temporal image sequence, Sruti Das Choudhury, Srinidhi Bashyam, Yumou Qiu, Ashok Samal, and Tala Awada
Crop Height Estimation with Unmanned Aerial Vehicles, Carrick Detweiler, David Anthony, and Sebastian Elbaum
A systematic approach to RNA-associated motif discovery, Tian Gao, Jiang Shu, and Juan Cui
Genome-scale MicroRNA target prediction through clustering with Dirichlet process mixture model, Zeynep M. Hakguder, Jiang Shu, Chunxiao Liao, Kaiyue Pan, and Juan Cui
Astrocyte EV-Induced lincRNA-Cox2 Regulates Microglial Phagocytosis: Implications for Morphine-Mediated Neurodegeneration, Guoku Hu, Ke Liao, Fang Niu, Lu Yang, Blake W. Dallon, Shannon E. Callen, Changhai Tian, Jiang Shu, Juan Cui, Zhiqiang Sun, Yuri L. Lyubchenko, Minhan Ka, Xian-Ming Chen, and Shilpa Buch
THE RHETORIC OF SCIENCE EDUCATION AND TECHNOLOGY, Iwasan D. Kejawa
Modeling and Testing a Family of Surgical Robots: An Experience Report, Niloofar Mansoor, Jonathan A. Saddler, Bruno Silva, Hamid Bagheri, Myra B. Cohen, and Shane Farritor
A Comparative Analysis of Motifs from Minoan and Hungarian Folk Art, Peter Z. Revesz
Computational Linguistics Techniques for the Study of Ancient Languages, Peter Z. Revesz
Vehicle-to-barrier communication during real-world vehicle crash tests, Samil Temel, Mehmet C. Vuran, Mohammad M.R. Lunar, Zhongyuan Zhao, Abdul Salam, Ronald K. Faller, and Cody S. Stolle
Internet of underground things in precision agriculture: Architecture and technology aspects, Mehmet C. Vuran, Abdul Salam, Rigoberto Wong, and Suat Irmak
An Information-Theoretic Framework for Evaluating Edge Bundling Visualization, Jieting Wu, Feiyu Zhu, Xin Liu, and Hongfeng Yu
miRDis: a Web tool for endogenous and exogenous microRNA discovery based on deep-sequencing data analysis, Hanyuan Zhang, Bruno Vieira Resende e Silva, and Juan Cui
Expression of the microRNA-143/145 cluster is decreased in hepatitis B virus-associated hepatocellular carcinoma and may serve as a biomarker for tumorigenesis in patients with chronic hepatitis B, Qi Zhao, Xiangfei Sun, Chao Liu, Tao Li, Juan Cui, and Chengyong Qin
2017
ScienceSDS: A Novel Software Defined Security Framework for Large-scale Data-intensive Science, Deepak Nadig Anantha and Byrav Ramamurthy
A Survey on Automated Food Monitoring and Dietary Management Systems, Vieira Bruno, Silva Resende, and Juan Cui
Automated Stem Angle Determination for Temporal Plant Phenotyping Analysis, Sruti Das Choudhury, Saptarsi Goswami, Srinidhi Bashyam, Ashok Samal, and Tala Awada
Aerial Water Sampler, Carrick Detweiler, John-Paul Ore, Baoliang Zhao, and Sebastian Elbaum
Affine-Invariant Triangulation of Spatio-Temporal Data with an Application to Image Retrieval, Sofie Haesevoets, Bart Kuijpers, and Peter Z. Revesz
COMPUTER SCIENCE TECHNOLOGY EDUCATION: AN INCREDIBLE EXPLOSION, Iwasan D. Kejawa
A Dynamic Data Structure to Efficiently Find the Points below a Line and Estimate Their Number, Bart Kuijpers and Peter Z. Revesz
Extending Wireless Rechargeable Sensor Network Life without Full Knowledge, Najeeb W. Najeeb and Carrick Detweiler
Testing the independence hypothesis of accepted mutations for pairs of adjacent amino acids in protein sequences, Jyotsna Ramanan and Peter Revesz
A Translation of the Malia Altar Stone, Peter Z. Revesz
The Cretan Script Family Includes the Carian Alphabet, Peter Z. Revesz
Enabling Technologies towards 5G Mobile Networks, Jing Zhao, Yejun He, Jian Qiao, Ben Niu, and Qiben Yan
2016
The Importance of Computing Education Research, Steve Cooper, Armando Fox, Susanne Hambrusch, Andrew Ko, and Beth Simon
Converting Heterogeneous Statistical Tables on the Web to Searchable Databases, David W. Embley, Mukkai Krishnamoorthy, George Nagy, and Sharad C. Seth
Converting heterogeneous statistical tables on the web to searchable databases, David W. Embley, Mukkai S. Krishnamoorthy, George Nagy, and Sharad C. Seth
Enhancement of ELDA Tracker Based on CNN Features and Adaptive Model Update, Changxin Gao, Huizhang Shi, Jin-Gang Yu, and Nong Sang
Wireless Communication in Data Centers: A Survey, Abdelbaset S. Hamza, Jitender Deogun, and Dennis R. Alexander
An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes, Bingqiang Liu, Hanyuan Zhang, Chuan Zhou, Guojun Li, Anne Fennell, Guanghui Wang, Yu Kang, Qi Liu, and Qin Ma
Bacterial regulon modeling and prediction based on systematic cis regulatory motif analyses, Bingqiang Liu, Chuan Zhou, Guojun Li, Hanyuan Zhang, Erliang Zeng, Qi Liu, and Qin Ma
Cubic Spline Interpolation Reveals Different Evolutionary Trends of Various Species, Zhiqiang Li and Peter Z. Revesz
Use of a Small Unmanned Aerial System for the SR-530 Mudslide Incident near Oso, Washington, Robin Murphy, Brittany Duncan, Tyler Collins, Justin Kendrick, Patrick Lohman, Tamara Palmer, and Frank Sanborn
Modeling Changes in Measured Conductance of Thin Boron Carbide Semiconducting Films Under Irradiation, George G. Peterson, Yongqiang Wang, Natale J. Ianno, and Michael Nastasi
A mitochondrial DNA-based computational model of the spread of human populations, Peter Revesz
A Spatio-Temporal Analysis of Mitochondrial DNA Haplogroup I, Peter Revesz
Incremental phylogenetics by repeated insertions: An evolutionary tree algorithm, Peter Revesz and Zhiqiang Li
Dynamic and Modularized MicroRNA Regulation and Its Implication in Human Cancers, Jiang Shu, Bruno Vieira Resende e Silva, Tian Gao, Zheng Xu, and Juan Cui
ANTENNA FOR WIRELESS UNDERGROUND COMMUNICATION, Mehmet Vuran, Xin Dong, and David Anthony
2015
UAV Recharging Opportunities and Policies for Sensor Networks, Elizabeth Basha, Michael Eiskamp, Jennifer Johnson, and Carrick Detweiler
Optimization and Control of Cyber-Physical Vehicle Systems, Justin M. Bradley and Ella M. Atkins
Dietary MicroRNA Database (DMD): An Archive Database and Analytic Tool for Food-Borne microRNAs, Kevin Chiang, Jiang Shu, Janos Zempleni, and Juan Cui
SEARCHING CODE BY SPECIFYING ITS BEHAVIOR, Sebastian Elbaum and Kathryn Stolee
A Rayleigh Quotient-Based Recursive Total-Least-Squares Online Maximum Capacity Estimation for Lithium-Ion Batteries, Taesic Kim, Yebin Wang, Zafer Sahinoglu, Toshihiro Wada, Satoshi Hara, and Wei Qiao
A prototype on-line AOTF hyperspectral image acquisition system for tenderness assessment of beef carcasses, Govindarajan Konda Naganathan, Kim Cluff, Ashok Samal, Chris Calkins, David D. Jones, Carol Lorenzen, and Jeyamkondan Subbiah
Revisiting operons: an analysis of the landscape of transcriptional units in E. coli, Xizeng Mao, Qin Ma, Bingqiang Liu, Xin Chen, Hanyuan Zhang, and Ying Xu
Cluster-Based Boosting, L. Dee Miller and Leen-Kiat Soh
Computational Characterization of Exogenous MicroRNAs that Can Be Transferred into Human Circulation, Jiang Shu, Kevin Chiang, Janos Zempleni, and Juan Cui
Human Absorbable MicroRNA Prediction based on an Ensemble Manifold Ranking Model, Jiang Shu, Kevin Chiang, Dongyu Zhao, and Juan Cui
Integral Equation Analysis of EM Scattering from Multilayered Metallic Photonic Crystal Accelerated with Adaptive Cross Approximation, Jianxun Su, Zengrui Li, Xujin Yuan, Yaoqing Yang, and Junhong Wang
Development of ListeriaBase and comparative analysis of Listeria monocytogenes, Mui Fern Tan, Cheuk Chuen Siow, Avirup Dutta, Naresh V.R. Mutha, Wei Yee Wee, Hamed Heydari, Shi Yang Tan, Mia Yang Ang, Guat Jah Wong, and Siew Woh Choo
Development of ListeriaBase and comparative analysis of Listeria monocytogenes, Mui Fern Tan, Cheuk Chuen Siow, Avirup Dutta, Naresh VR Mutha, Wei Yee Wee, Hamed Heydari, Shi Yang Tan, Mia Yang Ang, Guat Jah Wong, and Siew Woh Choo
2014
Adaptive Decentralized Control of Mobile Underwater Sensor Networks and Robots for Modeling Underwater Phenomena, Carrick Detweiler, Sreeja Banerjee, Marek Doniec, Mingshun Jiang, Francesco Peri, Robert F. Chen, and Daniela Rus
Autonomous Capabilities for Small Unmanned Aerial Systems Conducting Radiological Response: Findings from a High-fidelity Discovery Experiment, Brittany Duncan and Robin Murphy
Network Innovation using OpenFlow: A Survey, Adrian Lara, Anisha Kolasani, and Byrav Ramamurthy
A phylogenetic model for understanding the effect of gene duplication on cancer progression, Qin Ma, Jaxk H. Reeves, David A. Liberles, Lili Yu, Zheng Chang, Jing Zhao, Juan Cui, Ying Xu, and Liang Liu
A Statistical–Physical Model of Interference in Diffusion-Based Molecular Nanonetworks, Massimiliano Pierobon and Ian F. Akyildiz
Balancing Cost and Reliability in the Design of Internet Protocol Backbone Using Agile Optical Networking, Byrav Ramamurthy, Rakesh K. Sinha, and K. K. Ramakrishnan
Cooperative Spectrum Sensing in Cognitive Radio Networks Using Multidimensional Correlations, Dongyue Xue, Eylem Ekici, and Mehmet C. Vuran
TCP Congestion Avoidance Algorithm Identification, Peng Yang, Juan Shao, Wen Luo, Lisong Xu, Jitender S. Deogun, and Ying Lu
2013
The endothelial lipase protein is promising urinary biomarker for diagnosis of gastric cancer, Xueyan Dong, Guoqing Wang, Guoqing Zhang, Zhaohui Ni, Jian Suo, Juan Cui, Ai Cui, Qing Yang, Ying Xu, and Fan Li
A Survey on Inter-Cell Interference Coordination Techniques in OFDMA-Based Cellular Networks, Abdelbaset S. Hamza, Shady S. Khalifa, Haitham S. Hamza, and Khaled Elsayed
Reliable Peak Selection for Multisample Analysis with Comprehensive Two-Dimensional Chromatography, Stephen E. Reichenbach, Xue Tian, Akwasi A. Boateng, Charles A. Mullen, Chiara Cordero, and Qingping Tao
Data mining the functional characterizations of proteins to predict their cancer-relatedness, Peter Revesz and Christopher Assi
Computational Prediction of Human Salivary Proteins from Blood Circulation and Application to Diagnostic Biomarker Identification, Jiaxin Wang, Yanchun Liang, Yan Wang, Juan Cui, Ming Liu, Wei Du, and Ying Xu
Articulatory Distinctiveness of Vowels and Consonants: A Data-Driven Approach, Jun Wang, Jordan R. Green, Ashok Samal, and Yana Yunusova
Exploring the Design Space of Multichannel Peer-to-Peer Live Video Streaming Systems, Miao Wang, Lisong Xu, and Byrav Ramamurthy
Elucidation of How Cancer Cells Avoid Acidosis through Comparative Transcriptomic Data Analysis, Kun Xu
Wireless Video Surveillance: A Survey, Yun Ye, Song Ci, Aggelos K. Katsaggelos, Yanwei Liu, and Yi Qian
2012
Systems biology in the frontier of cancer research: a report of the Second International Workshop of Cancer Systems Biology, Juan Cui, Yan-Chun Liang, and Ying Xu
Redistricting Using Constrained Polygonal Clustering, Deepti Joshi, Leen-Kiat Soh, and Ashok Samal
Conductive Concrete as an Electromagnetic Shield, Aaron Krause, Lim Nguyen, Christopher Tuan, John Bonsell, and Bing Chen