2007
Molecular dynamics of homogeneous nucleation in the vapor phase of Lennard-Jones. III. Effect of carrier gas pressure, Kenji Yasuoka and Xiao Cheng Zeng
Structure and Biosynthesis of Heat-Stable Antifungal Factor (HSAF), a Broad-Spectrum Antimycotic with a Novel Mode of Action, Fengan Yu, Kathia Zaleta-River, Xiangcheng Zhu, Justin Huffman, Jeffrey C. Millet, Steven D. Harris, Gary Y. Yuen, Xing-Cong Li, and Liangcheng Du
A Strategy to Protect and Sensitize Near-Infrared Luminescent Nd3+ and Yb3+: Organic Tropolonate Ligands for the Sensitization of Ln3+-Doped NaYF4 Nanocrystals, Jian Zhang, Chad M. Shade, Demetra A. Chengelis, and Stéphane Petoud
2006
The Arabidopsis homolog of trithorax, ATX1, binds phosphatidylinositol 5-phosphate, and the two regulate a common set of target genes, Raul Alvarez-Venegas, Monther Sadder, Andrej Hlavacka, Frantisek Baluska, Yuannan Xia, Guoqing Lu, Alexey Firsov, Gautam Sarath, Hideaki Moriyama, Joseph G. Dubrovsky, and Zoya V. Avramova
Relative stability of planar versus double-ring tubular isomers of neutral and anionic boron cluster B20 and B20-, Wei An, Satya S. Bulusu, Yi Gao, and Xiao Cheng Zeng
Multiwalled ice helixes and ice nanotubes, Jaeil Bai, Jun Wang, and Xiao Cheng Zeng
Nonextensivity in magnetic nanoparticle ensembles, Christian Binek, Srinivas Polisetty, Xi He, Tathagata Mukherjee, Rajasekaran Rajesh, and Jody G. Redepenning
Evidence of hollow golden cages, Satya S. Bulusu, Xi Li, Lai-Sheng Wang, and Xiao Cheng Zeng
Evidence of hollow golden cages: Supplementary Materials and Supporting Information, Satya S. Bulusu, Xi Li, Lai-Sheng Wang, and Xiao Cheng Zeng
Structures and relative stability of neutral gold clusters: Aun (n=15–19), Satya S. Bulusu and Xiao Cheng Zeng
Homogeneous nucleation at high supersaturation and heterogeneous nucleation on microscopic wettable particles: A hybrid thermodynamic/density-functional theory, T. V. Bykov and Xiao Cheng Zeng
Protein Structure Similarity Clustering: Dynamic Treatment of PDB Structures Facilitates Clustering, Bradley D. Charette, Richard G. MacDonald, Stefan Wetzel, David B. Berkowitz, and Herbert Waldmann
Hybrid atomistic-coarse-grained treatment of multiscale processes in heterogeneous materials: A self-consistent-field approach, Dennis J. Diestler, H. Zhou, Ruqiang Feng, and Xiao Cheng Zeng
Kinetics of the DNA polymerase pyrococcus kodakaraensis, Mark A. Griep, Casey A. Kotera, R.M. Nelson, and Hendrik J. Viljoen
Negative impact of noise on the principal component analysis of NMR data, Steven M. Halouska and Robert Powers
Single-crystal, polarized, Raman scattering study of the molecular and lattice vibrations for the energetic material cyclotrimethylene trinitramine, James C. Haycraft, Lewis L. Stevens, and Craig J. Eckhardt
The elastic constants and related properties of the energetic material cyclotrimethylene trinitramine (RDX) determined by Brillouin scattering, James J. Haycraft, Lewis L. Stevens, and Craig J. Eckhardt
A topology-constrained distance network algorithm for protein structure determination from NOESY data, Yuanpeng Janet Huang, Roberto Tejero, Robert Powers, and Gaetano T. Montelione
Global characterization of porcine intrauterine proteins during early pregnancy, Jean-Patrick R. Kayser, Jong G. Kim, Ronald Cerny, and Jeffrey L. Vallet
Distinct Ceramide Synthases Regulate Polarized Growth in the Filamentous Fungus Aspergillus nidulansD, Shaojie Li, Liangcheng Du, Gary Yuen, and Steven D. Harris
Supplemental Materials for "Distinct Ceramide Synthases Regulate Polarized Growth in the Filamentous Fungus Aspergillus nidulansD", Shaojie Li, Liangcheng Du, Gary Yuen, and Steven D. Harris
Stability of warfarin solutions for drug–protein binding measurements: Spectroscopic and chromatographic studies, Annette C. Moser, Charles A. Kingsbury, and David S. Hage
Acrosome reaction is subfamily specific in sea star fertilization, Mia Nakachi, Hideaki Moriyama, Motonori Hoshi, and Midori Matsumoto
Electronic structure and vibrational spectra of C2B10-based clusters and films, Kyungwha Park, M. R. Pederson, L. L. Boyer, Wai-Ning Mei, Renat F. Sabirianov, Xiao Cheng Zeng, Satya S. Bulusu, Seamus Curran, James Dewald, Ellen Day, Shireen Adenwalla, Manuel Diaz, Luis G. Rosa, Snjezana Balaz, and Peter A. Dowben
Comparison of Protein Active Site Structures for Functional Annotation of Proteins and Drug Design, Robert Powers, Jennifer C. Copeland, Katherine Germer, Kelly A. Mercier, Viswanathan Ramanathan, and Peter Revesz
ELECTROLYTIC DEPOSITION OF COATINGS FOR PROSTHETIC METALS AND ALLOYS, Jody G. Redepenning
A Minimum-Impact Method for Measuring Corrosion Rate of Steel-Hulled Shipwrecks in Seawater, Matthew A. Russell, David L. Conlin, Larry E. Murphy, Donald L. Johnson, Brent M. Wilson, and James D. Carr
“Reductive ozonolysis” via a new fragmentation of carbonyl oxides, Chris Schwartz, Joseph Raible, Kyle Mott, and Patrick Dussault
Rhodium-catalyzed asymmetric hydrogenation using self-assembled chiral bidentate ligands, James M. Takacs, Kittichai Chaiseeda, Shin A. Moteki, D. Sahadeva Reddy, Di Wu, and Kusumlata Chandra
Molecular simulations of solid-liquid interfacial tension of silicon, Yuk Wai Tang, Jun Wang, and Xiao Cheng Zeng
DNA Polymerase Chain Reaction: A Model of Error Frequencies and Extension Rates, Hendrik J. Viljoen, Mark A. Griep, Scott Whitney, and Michael Nelson
Changes in DNA bending and flexing due to tethered cations detected by fluorescence resonance energy transfer, Sarah L. Williams, Laura K. Parkhurst, and Lawrence J. Parkhurst
Adsorption of hydrogen molecules on the platinum-doped boron nitride nanotubes, Xiaojun Wu, J.L. Yang, and Xiao Cheng Zeng
Adsorption of transition-metal atoms on boron nitride nanotube: A density-functional study, Xiaojun Wu and Xiao Cheng Zeng
Structures and relative stability of medium-sized silicon clusters. V. Low-lying endohedral fullerenelike clusters Si31–Si40 and Si45, Soohaeng Yoo, N. Shao, C. Koehler, T. Fraunhaum, and Xiao Cheng Zeng
Structures and relative stability of medium-sized silicon clusters. IV. Motif based low-lying clusters Si21–Si30, Soohaeng Yoo and Xiao Cheng Zeng
Search for global-minimum geometries of medium-sized germanium clusters. II. Motif-based low-lying clusters Ge21–Ge29, S. Yoo and Xiao Cheng Zeng
2005
Stereoselective allylation of chiral monoperoxyacetals, Aqeel Ahmed and Patrick Dussault
Ab initio calculation of bowl, cage, and ring isomers of C20 and C20-, Wei An, Yi Gao, Satya S. Bulusu, and Xiao Cheng Zeng
In Situ Screening To Optimize Variables in Organic Reactions, David Berkowitz, Mohua Bose, and Sungjo Choi
Search for global minimum geometries for medium sized germanium clusters: Ge12–Ge20, Satya S. Bulusu, S. Yoo, and Xiao Cheng Zeng
The anomalous "stiffness" of biphenydimethyldithiol, D.Q. Feng, Peter A. Dowben, R. Rajesh, and Jody G. Redepenning
M4@Si28 (M=Al,Ga) Metal-encapsulated tetrahedral silicon fullerene, Yi Gao and Xiao Cheng Zeng
Large-scale molecular-dynamics simulation of nanoscale hydrophobic interaction and nanobubble formation, Takahiro Koishi, Kenji Yasuoka, Toshikazu Ebisuzaki, S. Yoo, and Xiao Cheng Zeng
Orientation of single crystals using linear approximations to NMR transits, Young-Sik Kye, Xingang Zhao, and Gerard S. Harbison
Deconvolution of the Co3O4(110) Fuchs–Kliewer phonon spectrum, E.M. Marsh, S.C. Petitto, G.S. Harbison, K.W. Wulser, and Marjorie Langell
Determining the optimal size of small molecule mixtures for high throughput NMR screening, Kelly A. Mercier and Robert Powers
Cooperative effects in two-dimensional ring-like networks of three-center hydrogen bonding interactions, Ruben D. Parra, Satya S. Bulusu, and Xiao Cheng Zeng
Solution structure of Archaeglobus fulgidis peptidyl-tRNA hydrolase (Pth2) provides evidence for an extensive conserved family of Pth2 enzymes in archea, bacteria, and eukaryotes, Robert Powers, Nebojsa Mirkovic, Sharon Goldsmith-Fischman, Thomas B. Acton, Yi-wen Chiang, Yuanpeng J. Huang, LiChung Ma, P. K. Rajan, John R. Cort, Michael A. Kennedy, Jinfeng Liu, Burkhard Rost, Barry Honig, Diana Murray, and Gaetano T. Montelione
Using Databases and Computational Techniques to Infer the Function of Novel Proteins, Viswanathan Ramanathan, Kelly A. Mercier, Robert Powers, and Peter Revesz
Dissociative electron attachment to uracil deuterated at the N1 and N3 positions, A. M. Scheer, C. Silvernail, John A. Belot Jr., Gordon A. Gallup, and Paul Burrow
Biologically Active Fluorescent Farnesol Analogs, Roman Shchepin, Razvan Dumitru, Kenneth W. Nickerson, Miranda Lund, and Patrick Dussault
The elastic constants and related properties of β-HMX determined by Brillouin scattering, Lewis L. Stevens and Craig J. Eckhardt
A macroscopic kinetic model for DNA polymerase elongation and high-fidelity nucleotide election, Steve Viljoen, Mark A. Griep, Michael Nelson, and Hendrik J. Viljoen
Melting temperature of ice Ih calculated from coexisting solid-liquid phases, J. Wang, S. Yoo, Jaeil Bai, James R. Morris, and Xiao Cheng Zeng
Structures and stability of medium-sized silicon clusters. III. Reexamination of motif transition in growth pattern from Si15 to Si20, Soohaeng Yoo and Xiao Cheng Zeng
Chlorella Virus-Encoded Deoxyuridine Triphosphatases Exhibit Different Temperature Optima, Yuanzheng Zhang, Hideaki Moriyama, Kohei Homma, and James L. Van Etten
Coarse-grained free-energy-functional treatment of quasistatic multiscale processes in heterogeneous materials, H. Zhou, Ruqiang Feng, Dennis J. Diestler, and Xiao Cheng Zeng
2004
In situ enzymatic screening (ISES) of P,N-ligands for Ni(0)- mediated asymmetric intramolecular allylic amination, David B. Berkowitz, Weijun Shen, and Gourhari Maiti
Orientation and bonding of biphenyldimethyldithiol, A. N. Caruso, R. Rajesh, Gordon A. Gallup, Jody G. Redepenning, and Peter A. Dowben
Magnesium/Methanol: An Effective Reducing Agent for Peroxides , Peng Dai, Patrick Dussault, and Tony K. Trullinger
An extension of the quasicontinuum treatment of multiscale solid systems to nonzero temperature, Dennis J. Diestler, Z.-B. Wu, and Xiao Cheng Zeng
Curtius rearrangement and Wolff homologation of functionalized peroxides, Patrick Dussault and Chunping Xu
Analysis of free analyte fractions by rapid affinity chromatography, David S. Hage and William A. Clarke
Nanoscale Hydrophobic Interaction and Nanobubble Nucleation, T. Koishi, S. Yoo, K. Yasuoka, Xiao Cheng Zeng, T. Narumi, R. Susukita, A. Kawai, H. Furusawa, A. Suenaga, N. Okimoto, N. Futatsugi, and T. Ebisuzaki
Melting points and thermal expansivities of proton-disordered hexagonal ice with several model potentials, Yuji Koyama, Hideki Tanaka, Guangtu Gao, and Xiao Cheng Zeng
Surface composition and structure of Co3O4(110) and the effect of impurity segregation, S.C. Petitto and Marjorie Langell
1H, 13C, and 15N assignments for the Archaeglobus fulgidis protein AF2095, Robert Powers, Thomas B. Acton, Yi-wen Chiang, P. K. Rajan, John R. Cort, Michael A. Kennedy, Jinfeng Liu, LiChung Ma, Burkhard Rost, and Gaetano T. Montelione
Optimization of Conditions for Studies of Protein Unfolding by Hydrogen Exchange/Mass Spectrometry, A.S. Raza and David L. Smith
Hybrid atomistic-coarse-grained treatment of thin-film lubrication. I, Z.-B. Wu, Dennis J. Diestler, Ruqiang Feng, and Xiao Cheng Zeng
Hybrid atomistic-coarse-grained treatment of thin-film lubrication. II, Z.-B. Wu, Dennis J. Diestler, and Xiao Cheng Zeng
In situ magnetoresistance of Ni nanocontacts, C-S Yang, Chunjuan Zhang, Jody G. Redepenning, and Bernard Doudin
Evidence that hsp90 Is Involved in the Altered Interactions of Acanthamoeba castellanii Variants with Bacteria, Ling Yan, Ronald Cerny, and Jeffrey D. Cirillo
The melting lines of model silicon calculated from coexisting solid–liquid phases, S. Yoo, Xiao Cheng Zeng, and James R. Morris
Structures and stability of medium silicon clusters. II. Ab initio molecular orbital calculations of Si12–Si20, X.-L. Zhu, Xiao Cheng Zeng, Y.A. Lei, and B. Pan
2003
Ab initio studies of quasi-one-dimensional pentagon and hexagon ice nanotubes, Jaeil Bai, C.-R. Su, R. D. Parra, Xiao Cheng Zeng, H. Tanaka, K. Koga, and J.-M. Li
Targeting Methanopterin Biosynthesis To Inhibit Methanogenesis, Razvan Dumitru, Hector Palencia, Scott D. Schroeder, Bree A. DeMontigny, James M. Takacs, Madeline E. Rasche, Jess L. Miner, and Stephen W. Ragsdale
Manufacturing of Novel Continuous Nanocrystalline Ceramic Nanofibers with Superior Mechanical Properties, Yuris A. Dzenis, Ruqiang Feng, Gustavo F. Larsen, Joseph Turner, and Xiao Cheng Zeng
Cooperative effects in one-dimensional chains of three-center hydrogen bonding interactions, Ruben D. Parra, Satya S. Bulusu, and Xiao Cheng Zeng
Oligothiophenes and Synthesis Thereof, Andrzej Rajca
Electrochemical preparation of chitosan/hydroxyapatite composite coatings on titanium substrates, Jody G. Redepenning, Guhanand Venkataraman, Jun Chen, and Nathan Stafford
Resonant tunneling in magnetoresistive Ni/NiO/Co nanowire junctions, Andrei Sokolov, Ildar F. Sabiryanov, Evgeny Y. Tsymbal, Bernard Doudin, Xingzhong Li, and Jody G. Redepenning
Bulk and interfacial properties of a dipolar-quadrupolar fluid in a uniform electric field: A density-functional approach, V.B. Warshavsky and Xiao Cheng Zeng
Effect of external electric field on the bulk and interfacial properties of weakly dipolar fluid in slab-shaped and sphere-shaped systems, V.B. Warshavsky and Xiao Cheng Zeng
Coarse-graining description of solid systems at nonzero temperature, Z.-B. Wu, Dennis J. Diestler, Ruqiang Feng, and Xiao Cheng Zeng
Effect of polarizability of halide anions on the ionic salvation in water clusters, S. Yoo, Y.A. Lei, and Xiao Cheng Zeng
Global geometry optimization of silicon clusters described by three empirical potentials, S. Yoo and Xiao Cheng Zeng
Structures and stabilities of small silicon clusters: Ab initio molecular-orbital calculations of Si7–Si11, Xiaolei Zhu and Xiao Cheng Zeng
2002
Heterogeneous nucleation on mesoscopic wettable particles: A hybrid thermodynamic/density-functional theory, T.V. Bykov and Xiao Cheng Zeng
A model for mechanochemical transformations: Applications to molecular hardness, instabilities, and shock initiation of reaction, Tadeusz Luty, Piotr Ordon, and Craig J. Eckhardt
Applications of NMR to structure-based drug design in structural genomics, Robert Powers
Bulk and interfacial properties of quadrupolar fluids, V.B. Warshavsky and Xiao Cheng Zeng
Effect of an Electric Field on the Surface Tension of a Dipolar-Quadrupolar Fluid and Its Implication for Sign Preference in Droplet Nucleation, V.B. Warshavsky and Xiao Cheng Zeng
Monte Carlo simulation of vapor–liquid binodal of water, S. Yoo and Xiao Cheng Zeng
2001
Quorum Sensing in the Dimorphic Fungus Candida albicans Is Mediated by Farnesol, Jacob M. Hornby, Ellen C. Jensen, Amber C. Lisec, Joseph J. Tasto, Brandon Jahnke, Richard Shoemaker, Patrick Dussault, and Kenneth W. Nickerson
Molecular dynamics simulation of supersaturated vapor nucleation in slit pore. II. Thermostatted atomic-wall model, K.T. Kholmurodov, K. Yasuoka, and Xiao Cheng Zeng
Nature of oxygen at rocksalt and spinel oxide surfaces, Marjorie Langell, J.G. Kim, D. L. Pugmire, and W. McCarroll
Preliminary X-ray diffraction studies of the transcriptional inhibitory antibody Fab41.4, Johanna Mazlo, Robyn L. Stanfield, Ian A. Wilson, Steven H. Hinrichs, and John J. Stezowski
Nucleation of Water and Methanol Droplets on Cations and Anions: The Sign Preference, K.J. Oh, G.T. Gao, and Xiao Cheng Zeng
Effect of carrier-gas pressure on barrier to nucleation: Monte Carlo simulation of water/nitrogen system, K.J. Oh and Xiao Cheng Zeng