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2013

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Single transcriptional and translational preQ1 riboswitches adopt similar pre-folded ensembles that follow distinct folding pathways into the same ligand-bound structure, Krishna C. Suddala, Arlie J. Rinaldi, Jun Feng, Anthony M. Mustoe, Catherine D. Eichhorn, Joseph A. Liberman, Joseph E. Wedekind, Hashim M. Al-Hashimi, Charles L. Brooks III, and Nils G. Walter

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Probing the bifunctional catalytic activity of ceria nanorods towards the cyanosilylation reaction, Gonghua Wang, Lu Wang, Xiang Fei, Yunyun Zhou, Renat F. Sabirianov, Wai Ning Mei, and Chin Li Cheung

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Probing the bifunctional catalytic activity of ceria nanorods towards the cyanosilylation reaction, Gonghua Wang, Lu Wang, Xiang Fei, Yunyun Zhou, Renat F. Sabirianov, Wai-Ning Mei, and Chin Li Cheung

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A facile, low-cost route for the preparation of calcined porous calcite and dolomite and their application as heterogeneous catalysts in biodiesel production, Rui Wang, Hu Li, Fei Chang, Jiafeng Luo, Milford A. Hanna, Daoyang Tan, Deyu Hu, Yuping Zhang, Baoan Song, and Song Yang

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Biosynthetic Mechanism for Sunscreens of the Biocontrol Agent Lysobacter enzymogenes, Yan Wang, Guoliang Qian, Yaoyao Li, Yansheng Wang, Yulan Wang, Stephen Wright, Yuezhong Li, Yuemao Shen, Fengquan Liu, and Liangcheng Du

2012

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Unraveling the structural complexity in a single-stranded RNA tail: implications for efficient ligand binding in the prequeuosine riboswitch, Catherine D. Eichhorn, Jun Feng, Krishna C. Suddala, Nils G. Walter, Charles L. Brooks III, and Hashim M. Al-Hashimi

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CRYSTALLINE NANO STRUCTURES, Barry Chin Li Cheung, Joseph Reese Brewer, and Nirmalendu Deo

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CcpA Regulates Arginine Biosynthesis in Staphylococcus aureus through Repression of Proline Catabolism, Austin S. Nuxoll, Steven M. Halouska, Marat R. Sadykov, Mark L. Hanke, Kenneth W. Bayles, Tammy Kielian, Robert Powers, and Paul D. Fey

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Knockdown of the Cellular Protein LRPPRC Attenuates HIV-1 Infection, Cameron J. Schweitzer, John M. Matthews, Christian J. Madson, Meghan R. Donnellan, Ronald Cerny, and Michael Belshan

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Identification and Analysis of Stereoselective Drug Interactions with Low Density Lipoprotein by High-performance Affinity Chromatography, Matt Sobansky and David S. Hage

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13C NMR Reveals No Evidence of n–π* Interactions in Proteins, Bradley Worley, Georgia Richard, Gerard S. Harbison, and Robert Powers

2011

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Characterizing RNA Dynamics at Atomic Resolution Using Solution-state NMR Spectroscopy, Jameson R. Bothe, Evgenia N. Nikolova, Catherine D. Eichhorn, Jeetender Chugh, Alexandar L. Hansen, and Hashim M. Al-Hashimi

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Corrosion Rate Trajectories of Concreted Iron and Steel Shipwrecks and Structures in Seawater— The Weins Number, Donald L. Johnson, D. J. Medlin, L. E. Murphy, J. D. Carr, and D. L. Conlin

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Bottom-Up Synthesis of Gold Octahedra with Tailorable Hollow Features, Mark R. Langille, Michelle L. Personick, Jian Zhang, and Chad A. Mirkin

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Synthesis and Isolation of {110}-Faceted Gold Bipyramids and Rhombic Dodecahedra, Michelle L. Personick, Mark R. Langille, Jian Zhang, Nadine Harris, George C. Schatz, and Chad A. Mirkin

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Assessing Secondary and College Students’ Implicit Assumptions about the Particulate Nature of Matter: Development and Validation of the Structure and Motion of Matter Survey, Marilyne Stains, Marta Escriu-Sune, Myrna Lisseth Molina Alvarez de Santizo, and Hannah Sevian

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Identification and Characterization of the Anti-Methicillin-Resistant Staphylococcus aureus WAP-8294A2 Biosynthetic Gene Cluster from Lysobacter enzymogenes OH11, Wei Zhang, Yaoyao Li, Guoliang Qian, Yan Wang, Haotong Chen, Yue-Zhong Li, Fengquan Liu, Yuemao Shen, and Liangcheng Du

2010

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METHOD FOR MONITORING THE STEREOSELECTIVITY AND RELATIVE RATE OF ORGANIC CHEMICAL REACTIONS, David R. Berkowitz, Sangeeta Dey, Kannan R. Karukurichi, and Weijun Shen

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The growth and evolution of thin oxide films on δ-plutonium surfaces, Harry G. García Flores and David L. Pugmire

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Corrosion of Civil War Era Sub Marine Explorer—Part 1, Donald L. Johnson, James D. Carr, Brent M. Wilson, Larry E. Murphy, and James P. Delgado

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Corrosion of Civil War Era Sub Marine Explorer—Part 2, Donald L. Johnson, James D. Carr, Brent M. Wilson, Larry E. Murphy, and James P. Delgado

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Corrosion of Steel Shipwreck in the Marine Environment: USS Arizona—Part 1, Donald L. Johnson, Brent M. Wilson, James D. Carr, Matthew A. Russell, Larry E. Murphy, and David L. Conlin

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Corrosion of Steel Shipwrecks in the Marine Environment: USS Arizona—Part 2, Donald L. Johnson, Brent M. Wilson, James D. Carr, Matthew A. Russell, Larry E. Murphy, and David L. Conlin

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DNA-nanoparticle superlattices formed from anisotropic building blocks, Matthew R. Jones, Robert J. Macfarlane, Byeongdu Lee, Jian Zhang, Kaylie L. Young, Andrew J. Senesi, and Chad A. Mirkin

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Transition states in Ei reactions, Charles A. Kingsbury

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PROCESS FOR PREPARATION OF CONDUCTING POLYMERS, Reuben D. Rieke

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SELF-ASSEMBLED HETEROLEPTIC CHIRAL LIGANDS, ASYMMETRIC CATALYST SYSTEMS AND METHODS, James M. Takacs

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Photomediated Synthesis of Silver Triangular Bipyramids and Prisms: The Effect of pH and BSPP, Jian Zhang, Mark R. Langille, and Chad A. Mirkin

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Concave Cubic Gold Nanocrystals with High-Index Facets, Jian Zhang, Mark R. Langille, Michelle L. Personick, Ke Zhang, Shuyou Li, and Chad A. Mirkin

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Nanopod Formation through Gold Nanoparticle Templated and Catalyzed Cross-linking of Polymers Bearing Pendant Propargyl Ethers, Ke Zhang, Joshua I. Cutler, Jian Zhang, Dan Zheng, Evelyn Auyeung, and Chad A. Mirkin

2009

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Techniques for Consecutive TEM and Atom Probe Tomography Analysis of Nanowires, D. R. Diercks, B. P. Gorman, Chin Li Cheung, and G. Wang

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ANHYDROUS FLUORIDE SALTS AND REAGENTS AND METHODS FOR THEIR PRODUCTION, Stephen G. DiMagno and Haoran Sun

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A new peroxide fragmentation: efficient chemical generation of 1O2 in organic media, Patrick Dussault and Prasanta Ghorai

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IMMOBILIZATION METHOD FOR PRODUCING ACTIVE α1-ACID GLYCOPROTEIN, David S. Hage and Hai Xuan

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Steel Hull Corrosion of USS Arizona with Applications to Submerged Resources, D. L. Johnson, D. J. Medlin, M. A. Russell, D. L. Conlin, L. E. Murphy, and J. D. Carr

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Quantum mechanical/molecular mechanical/continuum style solvation model: Linear response theory, variational treatment, and nuclear gradients, Hui Li

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Heterogeneous conductorlike solvation model, Hui Li and Dejun Si

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A Multi-Step NMR Screen for the Identification and Evaluation of Chemical Leads for Drug Discovery, Kelly A. Mercier, Matthew D. Shortridge, and Robert Powers

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Structural and Functional Similarity between the Bacterial Type III Secretion System Needle Protein PrgI and the Eukaryotic Apoptosis Bcl-2 Proteins, Matthew D. Shortridge and Robert Powers

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Continuous and Smooth Potential Energy Surface for Conductorlike Screening Solvation Model Using Fixed Points with Variable Areas, Peifeng Su and Hui Li

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Energy Decomposition Analysis of Covalent Bonds and Intermolecular Interactions, Peifeng Su and Hui Li

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Smooth potential energy surface for cavitation, dispersion, and repulsion free energies in polarizable continuum model, Yali Wang and Hui Li

2008

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Single and double reduction of C60 in 2:1 γ-cyclodextrin/[60]fullerene inclusion complexes by cyclodextrin radicals, Annamaria Quaranta, Yongmin Zhang, Yali Wang, Ruth Edge, Suppiah Navaratnam, Edward J. Land, and René V. Bensasson

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Local Structures Surrounding Zr in Nanostructurally Stabilized Cubic Zirconia: Structural Origin of Phase Stability, Y. L. Soo, P. J. Chen, S. H. Huang, T. J. Shiu, T. Y. Tsai, Y. H. Chow, Y. C. Lin, S. C. Weng, S. L. Chang, G. Wang, Chin Li Cheung, Renat F. Sabirianov, Wai-Ning Mei, F. Namavar, H. Haider, K. L. Garvin, J. F. Lee, H. Y. Lee, and P. P. Chu

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Classification of Chemical Reactions: Stages of Expertise, Marilyne Stains and Vicente Talanquer

2007

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Surface properties of LiCoO2, LiNiO2 and LiNi1-xCoxO2, Anthony W. Moses; Harry G. Garcia Flores,; Jong-Gyu Kim; and Marjorie Langell

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Slow turning reveals enormous quadrupolar interactions (STREAQI), John Persons and Gerard S. Harbison

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Classification of Chemical Substances Using Particulate Representations of Matter: An Analysis of Student Thinking, Marilyne Stains and Vicente Talanquer

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Supporting Information for "The Molecular Basis of High-Altitude Adaptation in Deer Mice", Jay F. Storz, Stephen J. Sabatino, Federico G. Hoffmann, Eben J. Gering, Hideaki Moriyama, Nuno Ferrand, Bruno Monteiro, and Michael W. Nachman

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The Molecular Basis of High-Altitude Adaptation in Deer Mice, Jay F. Storz, Stephen J. Sabatino, Federico G. Hoffmann, Eben J. Gering, Hideaki Moriyama, Nuno Ferrand, Bruno Monteiro, and Michael W. Nachman

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Tris(dialkylamino)aluminums: Syntheses, characterization, volatility comparison, and atomic layer deposition of alumina thin films, Casey R. Wade, Carter Silvernail, Chiranjib Banerjee, Axel Soulet, James McAndrew, and John A. Belot Jr.

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Synthesis and Structural Characterization of Two Five Coordinate Aluminum Alkyl and Bis(Trimethylsilyl)Amino Complexes Bearing Acyclic Tetradentate Schiff Bases, C. R. Wade, B. J. Lamprecht, V. W. Day, and John A. Belot

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Corrosion Studies on the USS Arizona with Application to a Japanese Midget Submarine, Brent M. Wilson, Donald L. Johnson, Hans VanTilburg, Matthew A. Russell, Larry E. Murphy, James D. Carr, Robert J. De Angelis, and David L. Conlin

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Molecular dynamics of homogeneous nucleation in the vapor phase of Lennard-Jones. III. Effect of carrier gas pressure, Kenji Yasuoka and Xiao Cheng Zeng

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Structure and Biosynthesis of Heat-Stable Antifungal Factor (HSAF), a Broad-Spectrum Antimycotic with a Novel Mode of Action, Fengan Yu, Kathia Zaleta-River, Xiangcheng Zhu, Justin Huffman, Jeffrey C. Millet, Steven D. Harris, Gary Y. Yuen, Xing-Cong Li, and Liangcheng Du

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A Strategy to Protect and Sensitize Near-Infrared Luminescent Nd3+ and Yb3+: Organic Tropolonate Ligands for the Sensitization of Ln3+-Doped NaYF4 Nanocrystals, Jian Zhang, Chad M. Shade, Demetra A. Chengelis, and Stéphane Petoud

2006

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The Arabidopsis homolog of trithorax, ATX1, binds phosphatidylinositol 5-phosphate, and the two regulate a common set of target genes, Raul Alvarez-Venegas, Monther Sadder, Andrej Hlavacka, Frantisek Baluska, Yuannan Xia, Guoqing Lu, Alexey Firsov, Gautam Sarath, Hideaki Moriyama, Joseph G. Dubrovsky, and Zoya V. Avramova

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Relative stability of planar versus double-ring tubular isomers of neutral and anionic boron cluster B20 and B20-, Wei An, Satya S. Bulusu, Yi Gao, and Xiao Cheng Zeng

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Multiwalled ice helixes and ice nanotubes, Jaeil Bai, Jun Wang, and Xiao Cheng Zeng

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Nonextensivity in magnetic nanoparticle ensembles, Christian Binek, Srinivas Polisetty, Xi He, Tathagata Mukherjee, Rajasekaran Rajesh, and Jody G. Redepenning

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Evidence of hollow golden cages, Satya S. Bulusu, Xi Li, Lai-Sheng Wang, and Xiao Cheng Zeng

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Evidence of hollow golden cages: Supplementary Materials and Supporting Information, Satya S. Bulusu, Xi Li, Lai-Sheng Wang, and Xiao Cheng Zeng

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Structures and relative stability of neutral gold clusters: Aun (n=15–19), Satya S. Bulusu and Xiao Cheng Zeng

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Homogeneous nucleation at high supersaturation and heterogeneous nucleation on microscopic wettable particles: A hybrid thermodynamic/density-functional theory, T. V. Bykov and Xiao Cheng Zeng

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Protein Structure Similarity Clustering: Dynamic Treatment of PDB Structures Facilitates Clustering, Bradley D. Charette, Richard G. MacDonald, Stefan Wetzel, David B. Berkowitz, and Herbert Waldmann

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Hybrid atomistic-coarse-grained treatment of multiscale processes in heterogeneous materials: A self-consistent-field approach, Dennis J. Diestler, H. Zhou, Ruqiang Feng, and Xiao Cheng Zeng

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Kinetics of the DNA polymerase pyrococcus kodakaraensis, Mark A. Griep, Casey A. Kotera, R.M. Nelson, and Hendrik J. Viljoen

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Negative impact of noise on the principal component analysis of NMR data, Steven M. Halouska and Robert Powers

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Single-crystal, polarized, Raman scattering study of the molecular and lattice vibrations for the energetic material cyclotrimethylene trinitramine, James C. Haycraft, Lewis L. Stevens, and Craig J. Eckhardt

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The elastic constants and related properties of the energetic material cyclotrimethylene trinitramine (RDX) determined by Brillouin scattering, James J. Haycraft, Lewis L. Stevens, and Craig J. Eckhardt

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A topology-constrained distance network algorithm for protein structure determination from NOESY data, Yuanpeng Janet Huang, Roberto Tejero, Robert Powers, and Gaetano T. Montelione

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Global characterization of porcine intrauterine proteins during early pregnancy, Jean-Patrick R. Kayser, Jong G. Kim, Ronald Cerny, and Jeffrey L. Vallet

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Distinct Ceramide Synthases Regulate Polarized Growth in the Filamentous Fungus Aspergillus nidulansD, Shaojie Li, Liangcheng Du, Gary Yuen, and Steven D. Harris

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Supplemental Materials for "Distinct Ceramide Synthases Regulate Polarized Growth in the Filamentous Fungus Aspergillus nidulansD", Shaojie Li, Liangcheng Du, Gary Yuen, and Steven D. Harris

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Stability of warfarin solutions for drug–protein binding measurements: Spectroscopic and chromatographic studies, Annette C. Moser, Charles A. Kingsbury, and David S. Hage

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Acrosome reaction is subfamily specific in sea star fertilization, Mia Nakachi, Hideaki Moriyama, Motonori Hoshi, and Midori Matsumoto

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Electronic structure and vibrational spectra of C2B10-based clusters and films, Kyungwha Park, M. R. Pederson, L. L. Boyer, Wai-Ning Mei, Renat F. Sabirianov, Xiao Cheng Zeng, Satya S. Bulusu, Seamus Curran, James Dewald, Ellen Day, Shireen Adenwalla, Manuel Diaz, Luis G. Rosa, Snjezana Balaz, and Peter A. Dowben

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Comparison of Protein Active Site Structures for Functional Annotation of Proteins and Drug Design, Robert Powers, Jennifer C. Copeland, Katherine Germer, Kelly A. Mercier, Viswanathan Ramanathan, and Peter Revesz

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ELECTROLYTIC DEPOSITION OF COATINGS FOR PROSTHETIC METALS AND ALLOYS, Jody G. Redepenning

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A Minimum-Impact Method for Measuring Corrosion Rate of Steel-Hulled Shipwrecks in Seawater, Matthew A. Russell, David L. Conlin, Larry E. Murphy, Donald L. Johnson, Brent M. Wilson, and James D. Carr

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“Reductive ozonolysis” via a new fragmentation of carbonyl oxides, Chris Schwartz, Joseph Raible, Kyle Mott, and Patrick Dussault

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Rhodium-catalyzed asymmetric hydrogenation using self-assembled chiral bidentate ligands, James M. Takacs, Kittichai Chaiseeda, Shin A. Moteki, D. Sahadeva Reddy, Di Wu, and Kusumlata Chandra

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Molecular simulations of solid-liquid interfacial tension of silicon, Yuk Wai Tang, Jun Wang, and Xiao Cheng Zeng

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DNA Polymerase Chain Reaction: A Model of Error Frequencies and Extension Rates, Hendrik J. Viljoen, Mark A. Griep, Scott Whitney, and Michael Nelson

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Changes in DNA bending and flexing due to tethered cations detected by fluorescence resonance energy transfer, Sarah L. Williams, Laura K. Parkhurst, and Lawrence J. Parkhurst

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Adsorption of hydrogen molecules on the platinum-doped boron nitride nanotubes, Xiaojun Wu, J.L. Yang, and Xiao Cheng Zeng

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Adsorption of transition-metal atoms on boron nitride nanotube: A density-functional study, Xiaojun Wu and Xiao Cheng Zeng

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Structures and relative stability of medium-sized silicon clusters. V. Low-lying endohedral fullerenelike clusters Si31–Si40 and Si45, Soohaeng Yoo, N. Shao, C. Koehler, T. Fraunhaum, and Xiao Cheng Zeng

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Structures and relative stability of medium-sized silicon clusters. IV. Motif based low-lying clusters Si21–Si30, Soohaeng Yoo and Xiao Cheng Zeng

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Search for global-minimum geometries of medium-sized germanium clusters. II. Motif-based low-lying clusters Ge21–Ge29, S. Yoo and Xiao Cheng Zeng

2005

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Stereoselective allylation of chiral monoperoxyacetals, Aqeel Ahmed and Patrick Dussault

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Ab initio calculation of bowl, cage, and ring isomers of C20 and C20-, Wei An, Yi Gao, Satya S. Bulusu, and Xiao Cheng Zeng

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In Situ Screening To Optimize Variables in Organic Reactions, David Berkowitz, Mohua Bose, and Sungjo Choi

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Search for global minimum geometries for medium sized germanium clusters: Ge12–Ge20, Satya S. Bulusu, S. Yoo, and Xiao Cheng Zeng

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The anomalous "stiffness" of biphenydimethyldithiol, D.Q. Feng, Peter A. Dowben, R. Rajesh, and Jody G. Redepenning

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M4@Si28 (M=Al,Ga) Metal-encapsulated tetrahedral silicon fullerene, Yi Gao and Xiao Cheng Zeng

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Large-scale molecular-dynamics simulation of nanoscale hydrophobic interaction and nanobubble formation, Takahiro Koishi, Kenji Yasuoka, Toshikazu Ebisuzaki, S. Yoo, and Xiao Cheng Zeng

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Orientation of single crystals using linear approximations to NMR transits, Young-Sik Kye, Xingang Zhao, and Gerard S. Harbison

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Deconvolution of the Co3O4(110) Fuchs–Kliewer phonon spectrum, E.M. Marsh, S.C. Petitto, G.S. Harbison, K.W. Wulser, and Marjorie Langell

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Determining the optimal size of small molecule mixtures for high throughput NMR screening, Kelly A. Mercier and Robert Powers